Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G54860.2
CDS Infomation	\| Sec1/munc18-like (SM) proteins superfamily \| Chr3:20324286-20329841 REVERSE LENGTH=1827 \| 201606
Sequence	ATGGCGCAGATCCCCAGCTTGGAGAATGCTCCTCTCAATCTGAAATCCATTAGGGACAAG TCTGAGAGGGAGCTCGTAAACTTGCTTAAAGACGTTCGTGGAACTAAGTGTTTGGTTATT GATCCAAAGCTCAGTGGTTCAGTCTCATTGATCATCCCGACCTCTAAGCTTAAGGAACTT GGTTTGGAGTTACGACATCTTACTGCGGAACCAGTTCAGACTGAATGCACAAAAGTGGTT TATCTTGTTCGCTCTCAACTTAGCTTTATGAAATTCATAGCGTCTCACATTCAGAATGAT ATTGCAAAAGCGATTCAGAGAGACTACTATGTTTACTTTGTTCCTCGTAGGTCTGTTGCG TGTGAGAAGATTCTTGAGCAAGAAAAAGTGCATAACCTGGTTACAGTGAAAGAGTTTCCC TTGTATATGGTTCCACTAGATGAGGATGTTATTTCATTTGAGCTCGAGCTCTCTGAAAAG GATTGCCTTGTGGATGGTGATGTTAGCTCCCTTTGGCATATCGCAAAAGCCATACATGAA CTTGAGTTCTCTTTTGGAGTTATATCAAAAATGAGGGCAAAGGGCAAAGCATCAGTTCGT GTTGCAGACATTCTAAACCGCATGCAAGTGGAGGAACCTGTCAATTCGAATGATGTGGGA AGGCCTGAAGTGGATACACTCATTCTATTGGATAGAGAGGTTGACATGGTTACTCCTATG TGTTCCCAGTTAACTTATGAGGGACTAATAGACGAGATTTTGCATATCAGCAATGGAGCT GTCGAGGTCGACTCATCTGTGATGGGTGCTCAGCAGGAGGGAAAAAAGATGAAAGTTCCC CTTAATTCAAGCAAATATGATGCATGGAATATATATTTTGATTTTCGTGGATTGGATAAT GATAAGTTGTTCAAGGAGACAAGGGATCTCAACTTTGAAGTCGTTGTACAGGTTCTACGT CAGAAGGCAATGACCATGAAGGAGGACTACACGGAAATTAATTCTACCCAGACAGTTTCT GAGCTGAAGGACTTTGTTAAGAAGCTTAACTCACTACCAGAGATGACAAGGCACATACAT CTTGCCCAGCACCTAACGACGTTCACATCCAAGCAATCATTTAATTCTCAACTTGATATG GAACAAACACTTGTTGAGGCAGAAAATTATGACATATGCTATGAGTACATAGAAGAGATG ATCCATAAACAGGAGCCTCTCACTAATGTCTTACGTCTATTAGTCTTATTTTCTGTTACA AACTCAGGGTTACCGAAGAAACAATTTGATTATATAAGAATGGAACTACTCCACAGTTAT GGGTTTGAGCATGTGGTTACACTGAACAACTTGGAAAAAGCAGGATTGTTGAAGAAGCAG GAGTTTAAAAGCAACTGGCTGACAGTGAAACGGACACTGAAACTTATTGTCGAAGACACT GATACGTCTAGGCCTAACGATATCGCTTATGTCTATTCGGGATATGCTCCTCTTAGCATT CGTCTTATCCAACAAGCTATTCATTCTGGATGGCGTCCTATGGAAGACATTTTGAAGCTG TTACCAGGACCCCATCTGGAGACTAAAAGAAGTGGATTCCCAAGTAGTCCATCAGTTGAT TCATTGCACGGAGCTTCAAATGGGGTTGCTGATGGAAGACGCTCAATTGTTCTTGTTGTC TTCATTGGAGGTGTAACATTTGCTGAAATCTCTGCTTTACGGTATCTCGCCTCTAAGGAA GGAATGGCTTATGATTTGATTGTTGCCACAACAAAAATCGTCAACGGCGCAACGTTGATA GAAACATTCATGGAAAAACTAGGCTGA

Peptide Sequence

PEP ID	AT3G54860.2
PEP Infomation	\| Sec1/munc18-like (SM) proteins superfamily \| Chr3:20324286-20329841 REVERSE LENGTH=608 \| 201606
Sequence	MAQIPSLENAPLNLKSIRDKSERELVNLLKDVRGTKCLVIDPKLSGSVSLIIPTSKLKEL GLELRHLTAEPVQTECTKVVYLVRSQLSFMKFIASHIQNDIAKAIQRDYYVYFVPRRSVA CEKILEQEKVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAIHE LEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPM CSQLTYEGLIDEILHISNGAVEVDSSVMGAQQEGKKMKVPLNSSKYDAWNIYFDFRGLDN DKLFKETRDLNFEVVVQVLRQKAMTMKEDYTEINSTQTVSELKDFVKKLNSLPEMTRHIH LAQHLTTFTSKQSFNSQLDMEQTLVEAENYDICYEYIEEMIHKQEPLTNVLRLLVLFSVT NSGLPKKQFDYIRMELLHSYGFEHVVTLNNLEKAGLLKKQEFKSNWLTVKRTLKLIVEDT DTSRPNDIAYVYSGYAPLSIRLIQQAIHSGWRPMEDILKLLPGPHLETKRSGFPSSPSVD SLHGASNGVADGRRSIVLVVFIGGVTFAEISALRYLASKEGMAYDLIVATTKIVNGATLI ETFMEKLG

Transcript Sequence

Transcript ID	AT3G54860.2
Transcript Infomation	\| Sec1/munc18-like (SM) proteins superfamily \| Chr3:20324090-20329917 REVERSE LENGTH=2099 \| 201606
Sequence	CGGTGGACTATCGTCGCTATCACACGGTGCAGGAAAAACAAACGGAGAAAGGTCGATCAT CTCTTGATCATCGTCCATGGCGCAGATCCCCAGCTTGGAGAATGCTCCTCTCAATCTGAA ATCCATTAGGGACAAGTCTGAGAGGGAGCTCGTAAACTTGCTTAAAGACGTTCGTGGAAC TAAGTGTTTGGTTATTGATCCAAAGCTCAGTGGTTCAGTCTCATTGATCATCCCGACCTC TAAGCTTAAGGAACTTGGTTTGGAGTTACGACATCTTACTGCGGAACCAGTTCAGACTGA ATGCACAAAAGTGGTTTATCTTGTTCGCTCTCAACTTAGCTTTATGAAATTCATAGCGTC TCACATTCAGAATGATATTGCAAAAGCGATTCAGAGAGACTACTATGTTTACTTTGTTCC TCGTAGGTCTGTTGCGTGTGAGAAGATTCTTGAGCAAGAAAAAGTGCATAACCTGGTTAC AGTGAAAGAGTTTCCCTTGTATATGGTTCCACTAGATGAGGATGTTATTTCATTTGAGCT CGAGCTCTCTGAAAAGGATTGCCTTGTGGATGGTGATGTTAGCTCCCTTTGGCATATCGC AAAAGCCATACATGAACTTGAGTTCTCTTTTGGAGTTATATCAAAAATGAGGGCAAAGGG CAAAGCATCAGTTCGTGTTGCAGACATTCTAAACCGCATGCAAGTGGAGGAACCTGTCAA TTCGAATGATGTGGGAAGGCCTGAAGTGGATACACTCATTCTATTGGATAGAGAGGTTGA CATGGTTACTCCTATGTGTTCCCAGTTAACTTATGAGGGACTAATAGACGAGATTTTGCA TATCAGCAATGGAGCTGTCGAGGTCGACTCATCTGTGATGGGTGCTCAGCAGGAGGGAAA AAAGATGAAAGTTCCCCTTAATTCAAGCAAATATGATGCATGGAATATATATTTTGATTT TCGTGGATTGGATAATGATAAGTTGTTCAAGGAGACAAGGGATCTCAACTTTGAAGTCGT TGTACAGGTTCTACGTCAGAAGGCAATGACCATGAAGGAGGACTACACGGAAATTAATTC TACCCAGACAGTTTCTGAGCTGAAGGACTTTGTTAAGAAGCTTAACTCACTACCAGAGAT GACAAGGCACATACATCTTGCCCAGCACCTAACGACGTTCACATCCAAGCAATCATTTAA TTCTCAACTTGATATGGAACAAACACTTGTTGAGGCAGAAAATTATGACATATGCTATGA GTACATAGAAGAGATGATCCATAAACAGGAGCCTCTCACTAATGTCTTACGTCTATTAGT CTTATTTTCTGTTACAAACTCAGGGTTACCGAAGAAACAATTTGATTATATAAGAATGGA ACTACTCCACAGTTATGGGTTTGAGCATGTGGTTACACTGAACAACTTGGAAAAAGCAGG ATTGTTGAAGAAGCAGGAGTTTAAAAGCAACTGGCTGACAGTGAAACGGACACTGAAACT TATTGTCGAAGACACTGATACGTCTAGGCCTAACGATATCGCTTATGTCTATTCGGGATA TGCTCCTCTTAGCATTCGTCTTATCCAACAAGCTATTCATTCTGGATGGCGTCCTATGGA AGACATTTTGAAGCTGTTACCAGGACCCCATCTGGAGACTAAAAGAAGTGGATTCCCAAG TAGTCCATCAGTTGATTCATTGCACGGAGCTTCAAATGGGGTTGCTGATGGAAGACGCTC AATTGTTCTTGTTGTCTTCATTGGAGGTGTAACATTTGCTGAAATCTCTGCTTTACGGTA TCTCGCCTCTAAGGAAGGAATGGCTTATGATTTGATTGTTGCCACAACAAAAATCGTCAA CGGCGCAACGTTGATAGAAACATTCATGGAAAAACTAGGCTGATCCGTAAACTGAGCGTT ATGTTCATCTTTTCTCTTTCGAGTGTGTTTATTAATTCATTTTTTGTATGTCTTTGTTTA TTTTTCTGGATCATTGTGGTTGCAGAGTGAATGGTATGCGTATGTGTATGTGTATATTAA ATGGTTGAGATACAGCGTGATTATACAAATTCAATAATGTTTTCTTGGTACAACCTTTC