Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G53920.1
CDS Infomation	\| RNApolymerase sigma-subunit C \| Chr3:19961041-19963820 REVERSE LENGTH=1716 \| 201606
Sequence	ATGGCTTCCTTCAATTCGTTCCCCATTCCCAAACAGATTGTTGGTTCTTCTTCTTCGTCG TCCTCCTCTACTTCTCGGCCACGTATTTTAGTGCGATCGAGTTTAACATCGTCTATGACC TCTACCAATAGTATGCTGGTCTTTGTACATCCTCATCCTTTGATTAAACATTGGCTCTCG TTATTGAGATCTGACCAAACTTCTTTCCCCATTTTCGTTAGAATTCCAATGACTTCTGTG GTTGCAACGAGGTGGTCGTTTCTATCCTCAGTCAAAGAGGAAAGCAGAATTTATCAGAAC GATTCTCTAAAAGCATGTGGCTGCGCATCTGTATCTCCTTACACTGCACAAAATAATGTT TATGTTGAGCTCAAAGACCCAAAGGAAAATATTGGCGTGGGTTCTGCAGAAAGATCATAT TCATCTCGTAGCATGTTGCAATACAATTTACTGGCAAAGAACCTTTTGGCACTAGAGGAA ACGTTTGTTGCCTTGGATTCTGTAAGAATGGAAAGAGATATTATGTTGCAAATGGGGAAG TTGGGGGCTGCTGAGTTATTTAAAACCTGTCTATCTAGGTATCGTGGTTCCTCAATCACG TCGTGCTTATCTGACACAACTGAGTTGGTGGATACTACGCCGAATCAACAAGTCTTTGTA TCCTCGAGGAGAAAAGTAAAAAAGAAAGCAAGGAGGTCGAGTGTGACAGCTGAGAATGGT GATCAGAGTTCTCTGCCAATCGGTTTAAGAACTACATGGAACAATATTGATGTCCCTAGA GTGAGAAGACCACCAAAATATAGAAAGAAAAGAGAGAGGATCTCTAGAAACGAGACTGAG ATGTCAACAGGAGTCAAGATAGTGGCGGACATGGAGAGAATCAGAACACAACTGGAGGAA GAAAGTGGTAAGGTAGCGAGTTTGAGTTGTTGGGCTGCAGCAGCTGGGATGAACGAGAAA CTCCTGATGCGCAATCTACATTACGGTTGGTACTGTAGAGATGAACTGGTGAAAAGCACC CGGTCTTTGGTTCTCTTCCTCGCAAGAAATTACCGTGGACTGGGAATCGCCCACGAAGAT TTAATTCAGGCAGGGTATGTGGGGGTGTTACAAGGAGCAGAGAGGTTTGATCACACAAGG GGTTACAAGTTTTCAACATATGTGCAGTATTGGATAAGAAAATCAATGTCTACGATGGTG TCACGGCATGCAAGAGGCGTCCATATTCCTTCATCAATAATCCGAACTATCAATCATATA CAAAAGGCTCGTAAGACCCTGAAAACGAGCCATGGTATAAAATATGCGGCTGATGAGGAG ATTGCAAAACTAACAGGCCACTCGGTGAAGAAGATTCGAGCAGCTAACCAATGCCTAAAA GTGGTCGGTTCAATTGACAAGAAAGTTGGGGATTGCTTTACTACAAAATTCCTGGAATTT ACACCAGACACAACGATGGAGAGTCCTGAGGAGGCCGTGATGAGGCAGAGCGCGAGGAGA GACATACATGATCTTCTAGAAGGGTTAGAGCCAAGAGAGAAGCAAGTGATGGTCCTACGT TATGGTCTTCAAGACTACAGGCCCAAGTCCCTGGAAGAGATTGGGAAGCTTCTTAAAGTT AGCAAAGAATGGATTCGGAAGATCGAACGGAGAGCAATGGCTAAACTCAGAGACCAACCC AACGCCGAAGACCTCAGATATTATTTGAATCAGTAA

Peptide Sequence

PEP ID	AT3G53920.1
PEP Infomation	\| RNApolymerase sigma-subunit C \| Chr3:19961041-19963820 REVERSE LENGTH=571 \| 201606
Sequence	MASFNSFPIPKQIVGSSSSSSSSTSRPRILVRSSLTSSMTSTNSMLVFVHPHPLIKHWLS LLRSDQTSFPIFVRIPMTSVVATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV YVELKDPKENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGK LGAAELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENG DQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEE ESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHED LIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHI QKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEF TPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKV SKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ

Transcript Sequence

Transcript ID	AT3G53920.1
Transcript Infomation	\| RNApolymerase sigma-subunit C \| Chr3:19960789-19963980 REVERSE LENGTH=2128 \| 201606
Sequence	TAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTGGCAACGAAACGGAGAGAGGGAATTAGGC AAATTAGAAGAGAGAAGTCGTAGACCATACAATTTGCACACAAACTATATCTCTCCACTG ACTCCAATCATCTCCTTCCTCCGCTCCCATCTGCGTCTCAATGGCTTCCTTCAATTCGTT CCCCATTCCCAAACAGATTGTTGGTTCTTCTTCTTCGTCGTCCTCCTCTACTTCTCGGCC ACGTATTTTAGTGCGATCGAGTTTAACATCGTCTATGACCTCTACCAATAGTATGCTGGT CTTTGTACATCCTCATCCTTTGATTAAACATTGGCTCTCGTTATTGAGATCTGACCAAAC TTCTTTCCCCATTTTCGTTAGAATTCCAATGACTTCTGTGGTTGCAACGAGGTGGTCGTT TCTATCCTCAGTCAAAGAGGAAAGCAGAATTTATCAGAACGATTCTCTAAAAGCATGTGG CTGCGCATCTGTATCTCCTTACACTGCACAAAATAATGTTTATGTTGAGCTCAAAGACCC AAAGGAAAATATTGGCGTGGGTTCTGCAGAAAGATCATATTCATCTCGTAGCATGTTGCA ATACAATTTACTGGCAAAGAACCTTTTGGCACTAGAGGAAACGTTTGTTGCCTTGGATTC TGTAAGAATGGAAAGAGATATTATGTTGCAAATGGGGAAGTTGGGGGCTGCTGAGTTATT TAAAACCTGTCTATCTAGGTATCGTGGTTCCTCAATCACGTCGTGCTTATCTGACACAAC TGAGTTGGTGGATACTACGCCGAATCAACAAGTCTTTGTATCCTCGAGGAGAAAAGTAAA AAAGAAAGCAAGGAGGTCGAGTGTGACAGCTGAGAATGGTGATCAGAGTTCTCTGCCAAT CGGTTTAAGAACTACATGGAACAATATTGATGTCCCTAGAGTGAGAAGACCACCAAAATA TAGAAAGAAAAGAGAGAGGATCTCTAGAAACGAGACTGAGATGTCAACAGGAGTCAAGAT AGTGGCGGACATGGAGAGAATCAGAACACAACTGGAGGAAGAAAGTGGTAAGGTAGCGAG TTTGAGTTGTTGGGCTGCAGCAGCTGGGATGAACGAGAAACTCCTGATGCGCAATCTACA TTACGGTTGGTACTGTAGAGATGAACTGGTGAAAAGCACCCGGTCTTTGGTTCTCTTCCT CGCAAGAAATTACCGTGGACTGGGAATCGCCCACGAAGATTTAATTCAGGCAGGGTATGT GGGGGTGTTACAAGGAGCAGAGAGGTTTGATCACACAAGGGGTTACAAGTTTTCAACATA TGTGCAGTATTGGATAAGAAAATCAATGTCTACGATGGTGTCACGGCATGCAAGAGGCGT CCATATTCCTTCATCAATAATCCGAACTATCAATCATATACAAAAGGCTCGTAAGACCCT GAAAACGAGCCATGGTATAAAATATGCGGCTGATGAGGAGATTGCAAAACTAACAGGCCA CTCGGTGAAGAAGATTCGAGCAGCTAACCAATGCCTAAAAGTGGTCGGTTCAATTGACAA GAAAGTTGGGGATTGCTTTACTACAAAATTCCTGGAATTTACACCAGACACAACGATGGA GAGTCCTGAGGAGGCCGTGATGAGGCAGAGCGCGAGGAGAGACATACATGATCTTCTAGA AGGGTTAGAGCCAAGAGAGAAGCAAGTGATGGTCCTACGTTATGGTCTTCAAGACTACAG GCCCAAGTCCCTGGAAGAGATTGGGAAGCTTCTTAAAGTTAGCAAAGAATGGATTCGGAA GATCGAACGGAGAGCAATGGCTAAACTCAGAGACCAACCCAACGCCGAAGACCTCAGATA TTATTTGAATCAGTAAAAAATAGAGATTTTTGGCTCCAATGACTCTTATGTCTTCTGTCA CAGTGTGATTGTGTAATCTTGTGTGTTTATAATAGTAACATTGGAGATCCTCGAGTGTAA AATGTCTTGTACGGGGTTGTAAACTTATATAGTTATATTACAGTGAAAATAGATATTGTA CAAGTTATAAAATCCTAACCACTTGGATAATCTACACATCCTTCGATTACTTTTACAATA TAGCTGTATCAATTATCTTGCATTTGTG