Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G53540.2
CDS Infomation	\| afadin \| Chr3:19846805-19849977 REVERSE LENGTH=2868 \| 201606
Sequence	ATGCTTTATTGTGTTTTTTATCTTCTTCTTCCTCCACTTATTGTGCTACAATTTACTCTT TTTGTCTCCCAAGTTTCCATTTTTTTTATTAAAGTTTCTTCCGTTGTCGTAAAGTTGATT GCTTTATTATCAATTGAGAATCCTAAAAAGTCATTCATTTTTTCAGGAAAGAAACAGAAG AGTCAGAAACTCAAATCTCCAAGGTCTTCTTCTCCTGAATTTAACTCTTGTCATTGTGAA GCTTTGAGTGAAAACAAGCAAGATTTTCCTACTGGAGTACCGATGAAAAGTTTGTTAGCA CAAGAAATGTCAAAGCAGAAAGAATCTAAAAAGAGATCGCCAAGCATTATAGCGAGATTG ATGGGTCTCGATGTTTTGCCTTCTCAGAGTTCTTCTCATAAGCAACAAAAGTCTATGGAG AATCAGCAAGGCAGGAGTGGTGGAGGCACTTCTTATAAATCTCTTGGAAAGCGCTCAAAG GGTGAGCAGAAGTTTAAAGATGTTTTCGAAGTTTTGGATGCAAAGATGGCAGAGAGTAAC AGAAACTTATATCATCAGGGGAGGGTGAATGCTAATCTAACACAGGCGGAGATGGCATTC ATACGGCAGAAGTTCATGGAGGCTAAGCGGCTATCAACGGATGATAAACTTCGTCATTCT AAAGAGTTTAATGATGCTCTTGAGGCTCTAGACTCTAACAAAGACCTCTTACTGAAGTTT CTTCAGCACCCAGATTCATTATTTACAAAACATCTGCATGATCTTCAAAGCACACCTCAC AAGCCACAGTACAGTCAAGCACCATCCTTGAAGTCGCCAAACAGTCAGAGGCATGTGGAT AGTCTGAAAACTCAGAAAGTTGATAGGGACTTGTTGAGGAAGAGTCATCGGTCGCCTCAT CGGAATGGTGGTGGTGGTAGTGGTTGTCCTAGCCGTTCTCATACTAGGCATGCTTCTTAT GACACGATTGACTTACCAAATGAGGAGCTGAGAAAGAGGAGTGAGTTGCAGCCAACCAAG ATTGTTGTTCTGAAACCTAACCTCGGGGAGCCACGTTATGCTGCTAGAACTTTTGCATCG CCAAGCTCTTCTTCCGATGAGTTCAGAGCAGATCGTAGGCTTCCATGCACCACCACTCAT GGCAGGCAGAAAAGTAATGAAGATGTCCGCCTGTCAAGACAGAATTCAAGAGATTGTGGA GAAATGGCCAAAATAATGTCTAGGCAAAGGAAGGTGAGCTGTGGCAATGGTCGTGCCATG AGTTTTGAGACTTCAGGATTTAGAGGATATGCAGGGGATGAAAGCTCATCAGGGAGTGAC TCCGCAAGTGAATCAGAGCTAGTGCCAGTAACTTCAGGAACAAGAACCGCCTTCAACCGT AGGAACTACCATCGATCTTTGCCTTCCAAGTCAACAACATCATCTGTGAGTAGGGAAGCT AAGAGGAGACTGTCAGAGAGATGGAAGCTGACACACAAGTTTGAGCACGAGATAGAAATT AGTAGAAGTGGGACATTAGCTGAAATGCTTGCCACTTCAGATAGGGAGGCAAGGCCAGCA AGTTTTAACGGACTCAGTTTCGAAGATGGGATTAGTAAAAGATTTGAGAACAACATTCAG TGGCCTGAACTGCCAGAACCAGTTGGAATCAGCAGTAGGGATGGTTGGAAAGGATCCTGC TCAAGAAGTTTTTCAAAATCCAGAACCATCATGAACCAGGAGAGCGCTGGTGGTTACACC ATAGTGTTGCCTAAGGGGTTGATCAATCGAGATGCATTAGTGCAGGGGGATTCTTCTCAT CACGGAGAGTCTTTCTTGTCAAGCAAATCTAGACCTGGCAGTAACAAATCTCATTCATCA TACAATAGTTCGCCAGAGGTCAGCATCACCCCAAGTTTAAGCAAGTTTGTTTATATGAAC GACGGGATTCCAAGCAAGTCAGCATCTCCTTTTAAAGCACGTAGCAGTTTCTCAGGAGAT GCAAATTCAGACACTGAAGATAGTTCAGCTTCTGATGATATCAAGACAGCAATGTCTTCT GAGGCTCTAGATTTGTCAACTGTCACCTCGGTAACTGACCCTGATATCTCAAGGAGGACA ACTGAGGATGTGAATCATTCTTCGGTTCCTGATCCACCACAGCCTCGTGAAAGCTCAAAG GAAGGAGATCAACCAAGTCCGGTTTCAGTTCTAGAAGCTTCGTTCGACGATGATGTATCA TCAGGTTCGGAATGCTTTGAGAGTGTTAGCGCGGATCTCCGAGGACTCAGAATGCAACTT CAGCTCCTCAAACTAGAGTCAGCTACTTACAAAGAAGGTGGCATGCTCGTTTCGAGTGAT GAAGACACTGATCAAGAGGAGTCATCCACAATAACTGATGAGGCTATGATTACCAAGGAG CTCAGAGAAGAAGACTGGAAGTCATCATACTTAGTTGATCTCCTAGCCAACTCCAGTTTC AGTGACTCAGACCACAACATTGTCATGGCAACAACACCTGTAGAGCCATCCTTGTTTGAG GATCTCGAGAAGAAGTACTCCAGCGTGAAAACCTCAACCCGGTTAGAAAGAAAGCTTCTT TTTGACCAGATCAGCAGAGAAGTACTACATATGTTAAAGCAGTTGTCGGATCCACACCCT TGGGTTAAATCCACAAAGGTATGCCCGAAATGGGATGCAAACAAGATACAAGAGACTCTG CGAGATTTGGTCACAAGAAAAGACGAGAAACCAAGCAAATATGATGTGGAGGAGAAGGAG TTGCAGTGGCTGAGTTTAGAAGATGACATTGAAATCATAGGTAGAGAGATTGAGGTAATG CTGACAGATGAACTCATAACAGAGCTTGTGGTAGGTGCAATCTTCTAG

Peptide Sequence

PEP ID	AT3G53540.2
PEP Infomation	\| afadin \| Chr3:19846805-19849977 REVERSE LENGTH=955 \| 201606
Sequence	MLYCVFYLLLPPLIVLQFTLFVSQVSIFFIKVSSVVVKLIALLSIENPKKSFIFSGKKQK SQKLKSPRSSSPEFNSCHCEALSENKQDFPTGVPMKSLLAQEMSKQKESKKRSPSIIARL MGLDVLPSQSSSHKQQKSMENQQGRSGGGTSYKSLGKRSKGEQKFKDVFEVLDAKMAESN RNLYHQGRVNANLTQAEMAFIRQKFMEAKRLSTDDKLRHSKEFNDALEALDSNKDLLLKF LQHPDSLFTKHLHDLQSTPHKPQYSQAPSLKSPNSQRHVDSLKTQKVDRDLLRKSHRSPH RNGGGGSGCPSRSHTRHASYDTIDLPNEELRKRSELQPTKIVVLKPNLGEPRYAARTFAS PSSSSDEFRADRRLPCTTTHGRQKSNEDVRLSRQNSRDCGEMAKIMSRQRKVSCGNGRAM SFETSGFRGYAGDESSSGSDSASESELVPVTSGTRTAFNRRNYHRSLPSKSTTSSVSREA KRRLSERWKLTHKFEHEIEISRSGTLAEMLATSDREARPASFNGLSFEDGISKRFENNIQ WPELPEPVGISSRDGWKGSCSRSFSKSRTIMNQESAGGYTIVLPKGLINRDALVQGDSSH HGESFLSSKSRPGSNKSHSSYNSSPEVSITPSLSKFVYMNDGIPSKSASPFKARSSFSGD ANSDTEDSSASDDIKTAMSSEALDLSTVTSVTDPDISRRTTEDVNHSSVPDPPQPRESSK EGDQPSPVSVLEASFDDDVSSGSECFESVSADLRGLRMQLQLLKLESATYKEGGMLVSSD EDTDQEESSTITDEAMITKELREEDWKSSYLVDLLANSSFSDSDHNIVMATTPVEPSLFE DLEKKYSSVKTSTRLERKLLFDQISREVLHMLKQLSDPHPWVKSTKVCPKWDANKIQETL RDLVTRKDEKPSKYDVEEKELQWLSLEDDIEIIGREIEVMLTDELITELVVGAIF

Transcript Sequence

Transcript ID	AT3G53540.2
Transcript Infomation	\| afadin \| Chr3:19846805-19850391 REVERSE LENGTH=3282 \| 201606
Sequence	AAAAGCAATTACTGATGTCTTTTTGTTTCCTTGTTCGGGTTGTTCGAGAGTCTCTCGTAG TGAGGGAGGTCATCAATACCACAATTGGTTACTTCTTAAACTATAGAGAAATGTATTTTT ATAAAATCTTGAGCTACAAAACAAAGAAATGTTTATTTGTTTCTTGTGGAAAAAAAACTA TAGTTTTAAAGCAGTGGGTAGAGAGAAGAAGAAGATTACAGATTGCTACTCTCTTTTTTT TTTCTTTTCTTATAATAATAAAGTAAAGAAAAGCTTTTTTAGAAAAAATTATCAGGGCAG TGTTTGTTGGGGTAGTAGTACTGTCATGATTTGGTTGTTTGTTAAAAATTTCTTTTTTTT CAACAGATTTAATGATTTAGATTTACATGTAATGAGTGTTTTTGCTTAACCTCAATGCTT TATTGTGTTTTTTATCTTCTTCTTCCTCCACTTATTGTGCTACAATTTACTCTTTTTGTC TCCCAAGTTTCCATTTTTTTTATTAAAGTTTCTTCCGTTGTCGTAAAGTTGATTGCTTTA TTATCAATTGAGAATCCTAAAAAGTCATTCATTTTTTCAGGAAAGAAACAGAAGAGTCAG AAACTCAAATCTCCAAGGTCTTCTTCTCCTGAATTTAACTCTTGTCATTGTGAAGCTTTG AGTGAAAACAAGCAAGATTTTCCTACTGGAGTACCGATGAAAAGTTTGTTAGCACAAGAA ATGTCAAAGCAGAAAGAATCTAAAAAGAGATCGCCAAGCATTATAGCGAGATTGATGGGT CTCGATGTTTTGCCTTCTCAGAGTTCTTCTCATAAGCAACAAAAGTCTATGGAGAATCAG CAAGGCAGGAGTGGTGGAGGCACTTCTTATAAATCTCTTGGAAAGCGCTCAAAGGGTGAG CAGAAGTTTAAAGATGTTTTCGAAGTTTTGGATGCAAAGATGGCAGAGAGTAACAGAAAC TTATATCATCAGGGGAGGGTGAATGCTAATCTAACACAGGCGGAGATGGCATTCATACGG CAGAAGTTCATGGAGGCTAAGCGGCTATCAACGGATGATAAACTTCGTCATTCTAAAGAG TTTAATGATGCTCTTGAGGCTCTAGACTCTAACAAAGACCTCTTACTGAAGTTTCTTCAG CACCCAGATTCATTATTTACAAAACATCTGCATGATCTTCAAAGCACACCTCACAAGCCA CAGTACAGTCAAGCACCATCCTTGAAGTCGCCAAACAGTCAGAGGCATGTGGATAGTCTG AAAACTCAGAAAGTTGATAGGGACTTGTTGAGGAAGAGTCATCGGTCGCCTCATCGGAAT GGTGGTGGTGGTAGTGGTTGTCCTAGCCGTTCTCATACTAGGCATGCTTCTTATGACACG ATTGACTTACCAAATGAGGAGCTGAGAAAGAGGAGTGAGTTGCAGCCAACCAAGATTGTT GTTCTGAAACCTAACCTCGGGGAGCCACGTTATGCTGCTAGAACTTTTGCATCGCCAAGC TCTTCTTCCGATGAGTTCAGAGCAGATCGTAGGCTTCCATGCACCACCACTCATGGCAGG CAGAAAAGTAATGAAGATGTCCGCCTGTCAAGACAGAATTCAAGAGATTGTGGAGAAATG GCCAAAATAATGTCTAGGCAAAGGAAGGTGAGCTGTGGCAATGGTCGTGCCATGAGTTTT GAGACTTCAGGATTTAGAGGATATGCAGGGGATGAAAGCTCATCAGGGAGTGACTCCGCA AGTGAATCAGAGCTAGTGCCAGTAACTTCAGGAACAAGAACCGCCTTCAACCGTAGGAAC TACCATCGATCTTTGCCTTCCAAGTCAACAACATCATCTGTGAGTAGGGAAGCTAAGAGG AGACTGTCAGAGAGATGGAAGCTGACACACAAGTTTGAGCACGAGATAGAAATTAGTAGA AGTGGGACATTAGCTGAAATGCTTGCCACTTCAGATAGGGAGGCAAGGCCAGCAAGTTTT AACGGACTCAGTTTCGAAGATGGGATTAGTAAAAGATTTGAGAACAACATTCAGTGGCCT GAACTGCCAGAACCAGTTGGAATCAGCAGTAGGGATGGTTGGAAAGGATCCTGCTCAAGA AGTTTTTCAAAATCCAGAACCATCATGAACCAGGAGAGCGCTGGTGGTTACACCATAGTG TTGCCTAAGGGGTTGATCAATCGAGATGCATTAGTGCAGGGGGATTCTTCTCATCACGGA GAGTCTTTCTTGTCAAGCAAATCTAGACCTGGCAGTAACAAATCTCATTCATCATACAAT AGTTCGCCAGAGGTCAGCATCACCCCAAGTTTAAGCAAGTTTGTTTATATGAACGACGGG ATTCCAAGCAAGTCAGCATCTCCTTTTAAAGCACGTAGCAGTTTCTCAGGAGATGCAAAT TCAGACACTGAAGATAGTTCAGCTTCTGATGATATCAAGACAGCAATGTCTTCTGAGGCT CTAGATTTGTCAACTGTCACCTCGGTAACTGACCCTGATATCTCAAGGAGGACAACTGAG GATGTGAATCATTCTTCGGTTCCTGATCCACCACAGCCTCGTGAAAGCTCAAAGGAAGGA GATCAACCAAGTCCGGTTTCAGTTCTAGAAGCTTCGTTCGACGATGATGTATCATCAGGT TCGGAATGCTTTGAGAGTGTTAGCGCGGATCTCCGAGGACTCAGAATGCAACTTCAGCTC CTCAAACTAGAGTCAGCTACTTACAAAGAAGGTGGCATGCTCGTTTCGAGTGATGAAGAC ACTGATCAAGAGGAGTCATCCACAATAACTGATGAGGCTATGATTACCAAGGAGCTCAGA GAAGAAGACTGGAAGTCATCATACTTAGTTGATCTCCTAGCCAACTCCAGTTTCAGTGAC TCAGACCACAACATTGTCATGGCAACAACACCTGTAGAGCCATCCTTGTTTGAGGATCTC GAGAAGAAGTACTCCAGCGTGAAAACCTCAACCCGGTTAGAAAGAAAGCTTCTTTTTGAC CAGATCAGCAGAGAAGTACTACATATGTTAAAGCAGTTGTCGGATCCACACCCTTGGGTT AAATCCACAAAGGTATGCCCGAAATGGGATGCAAACAAGATACAAGAGACTCTGCGAGAT TTGGTCACAAGAAAAGACGAGAAACCAAGCAAATATGATGTGGAGGAGAAGGAGTTGCAG TGGCTGAGTTTAGAAGATGACATTGAAATCATAGGTAGAGAGATTGAGGTAATGCTGACA GATGAACTCATAACAGAGCTTGTGGTAGGTGCAATCTTCTAG