Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G52140.4
CDS Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19333232-19341295 FORWARD LENGTH=4260 \| 201606
Sequence	ATGGCTGGGAAGTCGAACAAATCGAAGGCCAAGAGAGCGGCTCAGAGCACTACCACCAAT TCCACTACTGATGTTAAATCCGATGCTCCTGCTCCTCCTGTTGCTGCTACTGTTCCTGCT ACTGCTCCGGTTACTGCTGCTGCTGCTCCGGTTGCTACTGCTGCTGCTCCGGTTACTGCT CCCGATAATGGCACCCTCACTGCTGTTGACTCTGCGGTGCCTGAAGCCAATGAAGTTGCT CCTACGATTCCTAAGGCTGACGAAAGTGAGTCACAAGTTGAAAATAACGATGCCCAACCC AAGCAAGGTGAACTCCGTCTTTATCCTGTGTCTGTCAAAACACAAAGTGGGGGTAAAATG GAGCTTCAATTGAACCCTGGAGACTCTGTGATGGATATAAGGCAGTTCCTCCTTGATGCT CCAGAGACGTGCTACTTCACTTGTTATGAGTTGTTACTCCGCAATAAAGATGGAGAGACT CATCATTTGGAAGACTACAATGAGATCTCTGAAGTAGCTGACATCACCATTGGTGGTTGC TCCTTGGAAATGGTTGCAGCATTGTATGATGATAGATCTATCAGAGCGCATGTTCACCGT GCCAGAGATCTTTTGTCTCTTTCAACACTTCACTCTTCTCTATCAACAACACTTGCCTTG CAGTATGACGCAGCACTGAACAAAGTTCAGAACCCTGGAGATAAACCAAAGTCTGACGTT CCAGAGCTGGAATGTTTGGGTTTTATGGAAGATGTGCCTGGCTCTCTCAAGAAGTTAATA AATTCTACATCAGAAGAGATCAGATCTGTGGAAAACATTGTGTTCTCATCGTTCAACCCT CCTCCAAGCCACAGAAGGCTTGTAGGAGATCTAATATATTTAGATGTTGTGACCTTGGAA GGTAACAAGTACTGCATAACAGGCACAACCAAAACATTTTATGTTAATTCCAGCTCAGGG AATATTCTCGATCCAAGACCAAGTAAATCTGGATTTGAAGCAGCTACGCTGATTGGACTA TTACAAAAGCTTAGCTCTAAGTTTAAAAAAGCTTTCCGTGAAGTCATGGAAAAGAAAGCC TCTGCTCATCCGTTTGAAAATGTTCAATCGCTTTTGCCACCACACTCATGGCTAAGAACT TATCCAGTACCCGATCACAAGCGTGATGCAGCGAGAGCAGAAGAAGCACTTACCATTTCC TATGGTAGTGAGTTAATTGGCATGCAGAGAGATTGGAACGAAGAGTTGCAATCTTGCAGA GAGTTCCCTCACACTTCTCCTCAAGAGAGATTTGTTTCCTTAATTGAAAATTTCCTTCGT TGCAGGATATTACGAGACAGGGCACTTTACAAAGTGTCTTCTGATTTTGTCGATGCAGCA CTTAACGGAGCTATTGGAGTAATCAGCCGGTGTATACCACCCATAAACCCAACTGATCCA GAGTGTTTGCACATGTATGTGCACAACAACATCTTTTTCAGTTTTGCTGTTGATGCCGAC ATTGAACAGCTCTCCAAGAAACGTCCATCTAATCAAATGACGGAGAAGGTGTCCTCATCT GAAAAGGTTTCATGCACAGAAGGAACCTGCGATAATGAAGAGCATAACAACTGTAATGAG GCGCCACTTGTTGAGAATGAGCAGGCTACGTATGCCTCTGCAAACAATGATTTGAAAGGC ACAAAATTATATCAAGAAGCTGATGTCCCAGGGCTATATAATCTGGCAATGGCCATTATT GATTACAGAGGCCATAGGGTTGTTGCTCAGAGTGTTCTACCGGGAATCCTTCAAGGGGAT AAATCAGATGCGCTTTTGTACGGTTCAGTCGACAATGGCAAGAAAATATGCTGGAATGAA GATTTTCATGCTAAGGTGCTAGAGGCCGCAAAGCTTCTTCACATTAAGGAACATTCTGTT ATCGATGCATCCGAAACTGTCTTTAAGTTGGCTGCACCAGTAGAGTGCAAAGGGATTGTT GGGAGTGATAACAGGCATTATCTCTTGGACTTGATGAGAGTGACACCTCGTGATGCCAAT TATACGGGCCCAGAGTCACGCTTTTGTGTCCTAAGACCAGAACTGATCACATCATTTTGC CAGGCCGAATCATTGGAAAAATCAAAATTTAAAACCAAGGCTGATGAAGGGGGCGATGAT TCTTCTAATGTTAGTGCTGATACTTCTAAAGTTGGTGATGCATTGATCGATGGAGAGGCA AATGGGGCTTCAAATTCTGATCAGAAATCTATTTCAGACAAGCAAAATACCACTGCCGAA GATTATGCAGCCGGGTCTTCTGAAAGTTCCAAATCATGTGATCAAATAGCATTTAACCCC AATGTCTTCACTGACTTCACATTAGGTGGCAATCAAGAGGAGATAGCTGCTGATGAAGAA AATGTGAAGAAAGTTAGCTCATACCTTGTGGATGTGGTCCTTCCAAAGTTTATAGAAGAT CTTTGCACTCTCGAAGTTTCTCCAATGGATGGTCAGACTTTGACAGAAGCACTCCATGCT CATGGTGTTAATGTTCGTTACATTGGAAGAGTTGCTAATGGGGTGAAGCATTTGCCTCAT TTGTGGGACCTTTGTCTGAATGAGATTACTGTAAGATCCGCAAAGCACATTTTGAAGGAC ATTCTAAGAGATATAGAGGATCACGATATTGGATCAGCAGTCTCACATTTCCTCAATTGT TTCTTTGGAAACTATCAAACTGCTGGGGGAAAAGCTAGCGCCAACAGCTCTACTGCCAAA AATCAAAAGAAGTTCTTTGGAGCCGATCAACCCATCACCAAGAAGGGTCAAGGAAGAGGG AAGGGAAAAGCTTCTTCAAAGAAAAGTTTTTCATCGTATATGATGGTTGACTCCAACATT CTATGGTCTGACATTCAGGAATTTGCCAAAGCGAAATATGAGTTTGAGTTGCCCGAGCTA TCAAGAACTACCGCTAAAAAAGTATCTGTTCTTCGTAATCTTTGCCAAAAGGTTGGTGTC AGTATTGCTGCTCGCAAATACGACTTCAGTGCAAACACGCCTTTTGAGACGTCAGATATT TTGGATCTTCGGCCCGTAATTAAGCACTCCGTCCCTGTATGCTCTGAGGCTAAAGATCTT GTTGAGATGGGGAAGGTCCAACTGGCTGAGGGCATGCTTAGTGAATCCTACACGTTCTTT TCAGAGGCATTTTCGATACTTCAACAGGTGACTGGTCCAATGCACAGGGAAGTTGCAAAC TGCTGCAGGTACCTGGCTATGGTTTTGTACCATGCAGGAGATATGGCTGGGGCCATAATG CAGCAACACAAGGAACTCATTATTAATGAGCGATGCCTTGGTTTGGACCATCCTGATACT GCCCATAGCTATGGCAATATGGCTCTTTTCTACCATGGACTGAATCAGACAGAACTTGCT CTACAAAACATGGGTCGAGCCTTGCTTCTACTTGGCCTTTCATCTGGCCCTGACCATCCA GATGTTGCAGCTACATTTATAAATGTTGCCATGATGTATCAAGACATGGGCAAAATGGAC ACAGCTCTACGTTATCTTCAAGAGGCTTTGAAGAAAAATGAGAGACTTCTTGGTCCTGAA CACATTCAGACTGCAGTATGCTACCACGCTCTTGCCATTGCGTTCAACTGTATGGGTGCA TTCAAGCTCTCACACCAGCATGAGAAGAAAACATACGACATACTTGTTAAACAATTGGGA GACGATGATTCTAGGACACGAGACTCTCTAAATTGGATGAAGACGTTTAAGATGCGTGAG CTTCAGATGACTGCACAAAAGCAGAAAGGACAGGCAGCTAATGCAGCCAACACGCAAAAG GCTATCGATCTCCTAAAGGCACATCCAGACCTGATACATGCGTTCCAAAACGCAGCTGCT ACTGGGAGGACAAATGCACTGAACTCTGCTGTCCTTGGGGAGACTCAACCACGGGGCAGA GGTTTTGATGAAAGAGCAGCTCGTGCTGCAGCTGAAGTTAGGAAGAAAGCAGCTGCAAAG GGGCTACTGGTTCGCCCCCAGGGTGGTGTTCCAGTTCAAGCCATGCCACCGCTCTCTCAG CTCCAAAACATGATCAATACCGCCACAGTTTCGTCTGAGAAAGGTGGAGAAAACGGGGAG GCAAAGGTACAAGAGAAGAAAGAATCCTCTGAAAATGGGAAAACAGAAAACCTGGCTCCT GCAGGATTAGGTGCTGGTTTAACATCTTTGGATAAGAAGAAGCAAAAAGCCAAAAAATAA

Peptide Sequence

PEP ID	AT3G52140.4
PEP Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19333232-19341295 FORWARD LENGTH=1419 \| 201606
Sequence	MAGKSNKSKAKRAAQSTTTNSTTDVKSDAPAPPVAATVPATAPVTAAAAPVATAAAPVTA PDNGTLTAVDSAVPEANEVAPTIPKADESESQVENNDAQPKQGELRLYPVSVKTQSGGKM ELQLNPGDSVMDIRQFLLDAPETCYFTCYELLLRNKDGETHHLEDYNEISEVADITIGGC SLEMVAALYDDRSIRAHVHRARDLLSLSTLHSSLSTTLALQYDAALNKVQNPGDKPKSDV PELECLGFMEDVPGSLKKLINSTSEEIRSVENIVFSSFNPPPSHRRLVGDLIYLDVVTLE GNKYCITGTTKTFYVNSSSGNILDPRPSKSGFEAATLIGLLQKLSSKFKKAFREVMEKKA SAHPFENVQSLLPPHSWLRTYPVPDHKRDAARAEEALTISYGSELIGMQRDWNEELQSCR EFPHTSPQERFVSLIENFLRCRILRDRALYKVSSDFVDAALNGAIGVISRCIPPINPTDP ECLHMYVHNNIFFSFAVDADIEQLSKKRPSNQMTEKVSSSEKVSCTEGTCDNEEHNNCNE APLVENEQATYASANNDLKGTKLYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGILQGD KSDALLYGSVDNGKKICWNEDFHAKVLEAAKLLHIKEHSVIDASETVFKLAAPVECKGIV GSDNRHYLLDLMRVTPRDANYTGPESRFCVLRPELITSFCQAESLEKSKFKTKADEGGDD SSNVSADTSKVGDALIDGEANGASNSDQKSISDKQNTTAEDYAAGSSESSKSCDQIAFNP NVFTDFTLGGNQEEIAADEENVKKVSSYLVDVVLPKFIEDLCTLEVSPMDGQTLTEALHA HGVNVRYIGRVANGVKHLPHLWDLCLNEITVRSAKHILKDILRDIEDHDIGSAVSHFLNC FFGNYQTAGGKASANSSTAKNQKKFFGADQPITKKGQGRGKGKASSKKSFSSYMMVDSNI LWSDIQEFAKAKYEFELPELSRTTAKKVSVLRNLCQKVGVSIAARKYDFSANTPFETSDI LDLRPVIKHSVPVCSEAKDLVEMGKVQLAEGMLSESYTFFSEAFSILQQVTGPMHREVAN CCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELA LQNMGRALLLLGLSSGPDHPDVAATFINVAMMYQDMGKMDTALRYLQEALKKNERLLGPE HIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGDDDSRTRDSLNWMKTFKMRE LQMTAQKQKGQAANAANTQKAIDLLKAHPDLIHAFQNAAATGRTNALNSAVLGETQPRGR GFDERAARAAAEVRKKAAAKGLLVRPQGGVPVQAMPPLSQLQNMINTATVSSEKGGENGE AKVQEKKESSENGKTENLAPAGLGAGLTSLDKKKQKAKK

Transcript Sequence

Transcript ID	AT3G52140.4
Transcript Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19332828-19341599 FORWARD LENGTH=4765 \| 201606
Sequence	AGAAACCCAAAAAGGAGGGATTGGTTTGTTATTCTCTGTATCTCTCTCCTAGTATTCAGC TCTAACACATAGAGAGGAGTCAGAATATCATCAGCCGCCTCTTTCACTTCAACCCTCCTT AAACCTCATCTCTTTCCTACTCCGCCGCTCTCTCCGTCGTCTCTCCCGTTACTCCATTTC TCTCGACCCCTCCAGGTGAAAATGGCTGGGAAGTCGAACAAATCGAAGGCCAAGAGAGCG GCTCAGAGCACTACCACCAATTCCACTACTGATGTTAAATCCGATGCTCCTGCTCCTCCT GTTGCTGCTACTGTTCCTGCTACTGCTCCGGTTACTGCTGCTGCTGCTCCGGTTGCTACT GCTGCTGCTCCGGTTACTGCTCCCGATAATGGCACCCTCACTGCTGTTGACTCTGCGGTG CCTGAAGCCAATGAAGTTGCTCCTACGATTCCTAAGGCTGACGAAAGTGAGTCACAAGTT GAAAATAACGATGCCCAACCCAAGCAAGGTGAACTCCGTCTTTATCCTGTGTCTGTCAAA ACACAAAGTGGGGGTAAAATGGAGCTTCAATTGAACCCTGGAGACTCTGTGATGGATATA AGGCAGTTCCTCCTTGATGCTCCAGAGACGTGCTACTTCACTTGTTATGAGTTGTTACTC CGCAATAAAGATGGAGAGACTCATCATTTGGAAGACTACAATGAGATCTCTGAAGTAGCT GACATCACCATTGGTGGTTGCTCCTTGGAAATGGTTGCAGCATTGTATGATGATAGATCT ATCAGAGCGCATGTTCACCGTGCCAGAGATCTTTTGTCTCTTTCAACACTTCACTCTTCT CTATCAACAACACTTGCCTTGCAGTATGACGCAGCACTGAACAAAGTTCAGAACCCTGGA GATAAACCAAAGTCTGACGTTCCAGAGCTGGAATGTTTGGGTTTTATGGAAGATGTGCCT GGCTCTCTCAAGAAGTTAATAAATTCTACATCAGAAGAGATCAGATCTGTGGAAAACATT GTGTTCTCATCGTTCAACCCTCCTCCAAGCCACAGAAGGCTTGTAGGAGATCTAATATAT TTAGATGTTGTGACCTTGGAAGGTAACAAGTACTGCATAACAGGCACAACCAAAACATTT TATGTTAATTCCAGCTCAGGGAATATTCTCGATCCAAGACCAAGTAAATCTGGATTTGAA GCAGCTACGCTGATTGGACTATTACAAAAGCTTAGCTCTAAGTTTAAAAAAGCTTTCCGT GAAGTCATGGAAAAGAAAGCCTCTGCTCATCCGTTTGAAAATGTTCAATCGCTTTTGCCA CCACACTCATGGCTAAGAACTTATCCAGTACCCGATCACAAGCGTGATGCAGCGAGAGCA GAAGAAGCACTTACCATTTCCTATGGTAGTGAGTTAATTGGCATGCAGAGAGATTGGAAC GAAGAGTTGCAATCTTGCAGAGAGTTCCCTCACACTTCTCCTCAAGAGAGATTTGTTTCC TTAATTGAAAATTTCCTTCGTTGCAGGATATTACGAGACAGGGCACTTTACAAAGTGTCT TCTGATTTTGTCGATGCAGCACTTAACGGAGCTATTGGAGTAATCAGCCGGTGTATACCA CCCATAAACCCAACTGATCCAGAGTGTTTGCACATGTATGTGCACAACAACATCTTTTTC AGTTTTGCTGTTGATGCCGACATTGAACAGCTCTCCAAGAAACGTCCATCTAATCAAATG ACGGAGAAGGTGTCCTCATCTGAAAAGGTTTCATGCACAGAAGGAACCTGCGATAATGAA GAGCATAACAACTGTAATGAGGCGCCACTTGTTGAGAATGAGCAGGCTACGTATGCCTCT GCAAACAATGATTTGAAAGGCACAAAATTATATCAAGAAGCTGATGTCCCAGGGCTATAT AATCTGGCAATGGCCATTATTGATTACAGAGGCCATAGGGTTGTTGCTCAGAGTGTTCTA CCGGGAATCCTTCAAGGGGATAAATCAGATGCGCTTTTGTACGGTTCAGTCGACAATGGC AAGAAAATATGCTGGAATGAAGATTTTCATGCTAAGGTGCTAGAGGCCGCAAAGCTTCTT CACATTAAGGAACATTCTGTTATCGATGCATCCGAAACTGTCTTTAAGTTGGCTGCACCA GTAGAGTGCAAAGGGATTGTTGGGAGTGATAACAGGCATTATCTCTTGGACTTGATGAGA GTGACACCTCGTGATGCCAATTATACGGGCCCAGAGTCACGCTTTTGTGTCCTAAGACCA GAACTGATCACATCATTTTGCCAGGCCGAATCATTGGAAAAATCAAAATTTAAAACCAAG GCTGATGAAGGGGGCGATGATTCTTCTAATGTTAGTGCTGATACTTCTAAAGTTGGTGAT GCATTGATCGATGGAGAGGCAAATGGGGCTTCAAATTCTGATCAGAAATCTATTTCAGAC AAGCAAAATACCACTGCCGAAGATTATGCAGCCGGGTCTTCTGAAAGTTCCAAATCATGT GATCAAATAGCATTTAACCCCAATGTCTTCACTGACTTCACATTAGGTGGCAATCAAGAG GAGATAGCTGCTGATGAAGAAAATGTGAAGAAAGTTAGCTCATACCTTGTGGATGTGGTC CTTCCAAAGTTTATAGAAGATCTTTGCACTCTCGAAGTTTCTCCAATGGATGGTCAGACT TTGACAGAAGCACTCCATGCTCATGGTGTTAATGTTCGTTACATTGGAAGAGTTGCTAAT GGGGTGAAGCATTTGCCTCATTTGTGGGACCTTTGTCTGAATGAGATTACTGTAAGATCC GCAAAGCACATTTTGAAGGACATTCTAAGAGATATAGAGGATCACGATATTGGATCAGCA GTCTCACATTTCCTCAATTGTTTCTTTGGAAACTATCAAACTGCTGGGGGAAAAGCTAGC GCCAACAGCTCTACTGCCAAAAATCAAAAGAAGTTCTTTGGAGCCGATCAACCCATCACC AAGAAGGGTCAAGGAAGAGGGAAGGGAAAAGCTTCTTCAAAGAAAAGTTTTTCATCGTAT ATGATGGTTGACTCCAACATTCTATGGTCTGACATTCAGGAATTTGCCAAAGCGAAATAT GAGTTTGAGTTGCCCGAGCTATCAAGAACTACCGCTAAAAAAGTATCTGTTCTTCGTAAT CTTTGCCAAAAGGTTGGTGTCAGTATTGCTGCTCGCAAATACGACTTCAGTGCAAACACG CCTTTTGAGACGTCAGATATTTTGGATCTTCGGCCCGTAATTAAGCACTCCGTCCCTGTA TGCTCTGAGGCTAAAGATCTTGTTGAGATGGGGAAGGTCCAACTGGCTGAGGGCATGCTT AGTGAATCCTACACGTTCTTTTCAGAGGCATTTTCGATACTTCAACAGGTGACTGGTCCA ATGCACAGGGAAGTTGCAAACTGCTGCAGGTACCTGGCTATGGTTTTGTACCATGCAGGA GATATGGCTGGGGCCATAATGCAGCAACACAAGGAACTCATTATTAATGAGCGATGCCTT GGTTTGGACCATCCTGATACTGCCCATAGCTATGGCAATATGGCTCTTTTCTACCATGGA CTGAATCAGACAGAACTTGCTCTACAAAACATGGGTCGAGCCTTGCTTCTACTTGGCCTT TCATCTGGCCCTGACCATCCAGATGTTGCAGCTACATTTATAAATGTTGCCATGATGTAT CAAGACATGGGCAAAATGGACACAGCTCTACGTTATCTTCAAGAGGCTTTGAAGAAAAAT GAGAGACTTCTTGGTCCTGAACACATTCAGACTGCAGTATGCTACCACGCTCTTGCCATT GCGTTCAACTGTATGGGTGCATTCAAGCTCTCACACCAGCATGAGAAGAAAACATACGAC ATACTTGTTAAACAATTGGGAGACGATGATTCTAGGACACGAGACTCTCTAAATTGGATG AAGACGTTTAAGATGCGTGAGCTTCAGATGACTGCACAAAAGCAGAAAGGACAGGCAGCT AATGCAGCCAACACGCAAAAGGCTATCGATCTCCTAAAGGCACATCCAGACCTGATACAT GCGTTCCAAAACGCAGCTGCTACTGGGAGGACAAATGCACTGAACTCTGCTGTCCTTGGG GAGACTCAACCACGGGGCAGAGGTTTTGATGAAAGAGCAGCTCGTGCTGCAGCTGAAGTT AGGAAGAAAGCAGCTGCAAAGGGGCTACTGGTTCGCCCCCAGGGTGGTGTTCCAGTTCAA GCCATGCCACCGCTCTCTCAGCTCCAAAACATGATCAATACCGCCACAGTTTCGTCTGAG AAAGGTGGAGAAAACGGGGAGGCAAAGGTACAAGAGAAGAAAGAATCCTCTGAAAATGGG AAAACAGAAAACCTGGCTCCTGCAGGATTAGGTGCTGGTTTAACATCTTTGGATAAGAAG AAGCAAAAAGCCAAAAAATAAGAAACAGTAGGATCTTGAAGGAAAATGGTGCTCAAAGAA AGTGCACGATTCTAAGTAGTGAAGTTGGTTTTTGTCTCTGGAAGTCGATAAACCACTTGC TGATTTCATTACATGACAACAACGCTTTTGTACGTTAAGCTTTGTTTTTCTTCCCATTAT GTCACAACGATTTGGGTAAGTCCCGCTTCCAGGCATGTCTGGCTTTTTTCTTTTTTCTTT TCCCCTCACTTTTCTGCGGGTGTAATTTTATACCACAAAAACGTCATTGATTTTCTAGTA ACTCCAATAAGCTCACAGTTCACGC