Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G51770.2
CDS Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19200328-19203998 REVERSE LENGTH=2880 \| 201606
Sequence	ATGCAGCATAATCTCTTCACAACAATGCGAAGTTTGAAGCTTGCTGAAGGTTGTAAAGGT ACACAAGTTTACGCTCTTAACCCATCAGCTCCTACTCCGCCTCCTCCTCCTGGTAATAGC AGCAGCGGTGGTGGTGGTGGTGGTGGTAGCGGCGGTGGCACCGGAGGTGTTGGGGATAAG CTTTTACAACATCTTTCAGATCATCTTCGTGTTAATTCTGTCCGATCTAAATCAAGCCGG ACTTATCCTCCTCCTACTCAACCAAACGCTGTCGTTTCTCCCGAGTTTCTTCTCCCTTGT GGACTTCCTGTTACGGATCTGCTTGAACCTCAAATCGATCCTTGCTTGAAATTCGTTGAT TTGGTTGAGAAGATGGCTCAAGTTTATCGTAGGATTGAGAATTGTTCTCAGTTTGAGAAA TCTGGGGCTTATTTAGAGCAATGCGCTATCTTCCGGGGCATTTCTGATCCGAAACTGTTC CGGCGGAGTCTCCGGTCGTCTAGGCAACATGCGGTGGATGTTCACGCGAAAGTCGTGTTA GCCTCGTGGCTTAGGTTCGAGAGGAGGGAGGATGAGTTGATTGGAACGACTTCTATGGAT TGTTGTGGCAGGAATTTGGAATGTCCAAAGGCTACTCTTGTTTCTGGTTATGATCCTGAA TCTGTTTATGATCCATGTGTTTGCTCTGGAGCTTCTAGATCAGAGATGATGAATGAAGAT GAATGTTCTACTTCTCAAGAAGTAGACTATGATATGTCATTTTGTATTGGTGATGAAGAG GTTCGTTGTGTGAGGTACAAAATCGCGTCTTTGTCCAGACCTTTCAAGGCGATGTTATAC GGTGGGTTTAGAGAAATGAAACGAGCCACGATCAATTTTACGCAGAATGGAATCTCTGTT GAAGGGATGAGAGCTGCAGAGATTTTCAGCAGGACCAACAGGTTAGATAACTTCCCTCCT AATGTTGTCTTGGAGCTTCTTAAGCTTGCAAATCGGTTCTGCTGCGATGAATTGAAATCC GCTTGTGATTCGCATTTGGCACATCTTGTTAATTCTCTGGATGAGGCAATGTTGTTGATT GAGTACGGATTAGAAGAGGCTGCGTATCTTCTGGTGGCAGCTTGTCTTCAGGTTTTTCTC AGGGAATTGCCTAGCTCTATGCATAATCCGAATGTTATAAAGATTTTCTGCAGCGCCGAG GGACGGGAAAGACTGGCGTCTCTTGGCCATGCTTCTTTTACATTGTACTTCTTCTTGAGC CAGATTGCGATGGAAGATGATATGAAATCTAACACAACTGTGATGCTCTTAGAACGTCTG GTTGAATGTGCGGTGGATAGTTGGGAGAAACAGCTTGCGTATCACCAATTAGGAGTGGTG ATGCTAGAGAGAAAAGAATATAAGGATGCTCAGAGATGGTTTAACGCAGCGGTTGAGGCT GGCCATCTTTACTCTCTCGTGGGTGTTGCCAGGACTAAGTTTAAGCGTGACCACAGGTAC TCGGCTTATAAGATCATCAATTCCTTGATTTCGGATCACAAGGCTACTGGGTGGATGCAC CAGGAAAGGTCCTTGTATTGCAGTGGTAAAGAAAAGCTGCTTGATTTGGATACAGCTACC GAGTTTGACCCTACTTTGACATTCCCCTACAAGTTCAGGGCAGTGGCTTTGGTGGAAGAA AACCAGTTTGGAGCTGCAATCGCAGAACTGAACAAGATTCTTGGATTCAAGGCCTCTCCT GACTGTCTAGAGATGAGGGCATGGATTTCTATAGGTATGGAGGATTACGAGGGTGCTTTG AAAGATATTCGGGCGCTTTTGACATTGGAGCCAAATTTTATGATGTTTAACTGGAAAATC CATGGTGATCATATGGTGGAGTTGCTCCGTCCGCTAGCCCAGCAGTGGAGCCAGGCTGAT TGCTGGATGCAGCTGTATGATCGTTGGTCTTCTGTGGATGATATTGGATCTCTAGCAGTT GTTCATCATATGCTTGCAAATGATCCAGGGAAGAGTCTTTTACGGTTCAGACAGTCTCTT CTTCTCCTACGGCTCAATTGTCAAAAGGCAGCAATGCGTAGTCTAAGGCTGGCTCGAAAC CATTCAAAGTCGGAGCATGAGAGACTTGTGTATGAAGGATGGATACTGTATGATACAGGC CACCGCGAGGAAGCCCTTGCCAAAGCGGAGGAATCCATTTCCATCCAAAGGTCGTTTGAA GCGTTTTTCCTCAAAGCTTACGCCCTTGCAGACTCTACGCTTGACCCGGACTCCTCTAAT TATGTGATTCAGCTCCTTCAAGAAGCGCTTAAGTGCCCCTCAGATGGTCTCCGTAAGGGA CAAGCATTGAACAACCTGGGGAGCGTATACGTGGATTGTGAAAAGCTGGATCTTGCAGCT GATTGCTACACAAACGCGCTCACCATCAAGCATACACGAGCTCACCAAGGTCTTGCACGT GTTTATCACCTGAAAAACCAACGGAAAGCTGCTTATGATGAAATGACAAAGCTAATAGAG AAGGCTCAGAACAATGCGTCGGCATATGAGAAGCGCTCTGAATATTGTGACCGCGAGATG GCTCAGAGCGACCTTTGCCTGGCAACACAACTTGACCCTCTCCGAACCTATCCTTACAGA TACAGAGCCGCAGTTCTTATGGACGACCACAAAGAAAGTGAAGCCATAGACGAGCTTTCG AGGGCGATATCATTTAAACCAGATCTTCAGCTATTACATCTACGAGCAGCATTCTATGAT TCAATGGGAGAAGGAGCGTCTGCTATAAAAGATTGTGAAGCAGCATTATGTATTGATCCA GGTCATGCAGATACACTCGAGCTCTACCACAAAGCTCGTGAACCAAACGACCAAAAGTAG

Peptide Sequence

PEP ID	AT3G51770.2
PEP Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19200328-19203998 REVERSE LENGTH=959 \| 201606
Sequence	MQHNLFTTMRSLKLAEGCKGTQVYALNPSAPTPPPPPGNSSSGGGGGGGSGGGTGGVGDK LLQHLSDHLRVNSVRSKSSRTYPPPTQPNAVVSPEFLLPCGLPVTDLLEPQIDPCLKFVD LVEKMAQVYRRIENCSQFEKSGAYLEQCAIFRGISDPKLFRRSLRSSRQHAVDVHAKVVL ASWLRFERREDELIGTTSMDCCGRNLECPKATLVSGYDPESVYDPCVCSGASRSEMMNED ECSTSQEVDYDMSFCIGDEEVRCVRYKIASLSRPFKAMLYGGFREMKRATINFTQNGISV EGMRAAEIFSRTNRLDNFPPNVVLELLKLANRFCCDELKSACDSHLAHLVNSLDEAMLLI EYGLEEAAYLLVAACLQVFLRELPSSMHNPNVIKIFCSAEGRERLASLGHASFTLYFFLS QIAMEDDMKSNTTVMLLERLVECAVDSWEKQLAYHQLGVVMLERKEYKDAQRWFNAAVEA GHLYSLVGVARTKFKRDHRYSAYKIINSLISDHKATGWMHQERSLYCSGKEKLLDLDTAT EFDPTLTFPYKFRAVALVEENQFGAAIAELNKILGFKASPDCLEMRAWISIGMEDYEGAL KDIRALLTLEPNFMMFNWKIHGDHMVELLRPLAQQWSQADCWMQLYDRWSSVDDIGSLAV VHHMLANDPGKSLLRFRQSLLLLRLNCQKAAMRSLRLARNHSKSEHERLVYEGWILYDTG HREEALAKAEESISIQRSFEAFFLKAYALADSTLDPDSSNYVIQLLQEALKCPSDGLRKG QALNNLGSVYVDCEKLDLAADCYTNALTIKHTRAHQGLARVYHLKNQRKAAYDEMTKLIE KAQNNASAYEKRSEYCDREMAQSDLCLATQLDPLRTYPYRYRAAVLMDDHKESEAIDELS RAISFKPDLQLLHLRAAFYDSMGEGASAIKDCEAALCIDPGHADTLELYHKAREPNDQK

Transcript Sequence

Transcript ID	AT3G51770.2
Transcript Infomation	\| tetratricopeptide repeat (TPR)-containing protein \| Chr3:19199750-19204464 REVERSE LENGTH=3833 \| 201606
Sequence	TTAGAAGTACGCATGACTTCTCTCTGAAAAACAGATTGGTAATAAAAAAGAAAAAGAAAA ACAATAAACGAAAACTGAGAGAGAGATTGAAAGAGAGATCGAGCGGAGGAAGATTCTTCC TCCAATTACCATCTCTCTATTTTTACGGGAAGATTCGTAAAATTAGTGCCATCAACCCAA AAAAAAAAACGAACCGGATCGATGAAACTTACAGTGCAAAAACACCATTTCCGAGAAGAA GAAGAAGACGAAGAACAAGACCTTCGTTGAGAAACTTTATTTGAAAAAAAAAAGAAACGA TTTTTATTGGTTAAAGGGACAGACCTCCTTTTGGTGGATTGGCTCCGTGATCCAATCCTC GGAATTGTTTTTAAGATGCAGCATAATCTCTTCACAACAATGCGAAGTTTGAAGCTTGCT GAAGGTTGTAAAGGTACACAAGTTTACGCTCTTAACCCATCAGCTCCTACTCCGCCTCCT CCTCCTGGTAATAGCAGCAGCGGTGGTGGTGGTGGTGGTGGTAGCGGCGGTGGCACCGGA GGTGTTGGGGATAAGCTTTTACAACATCTTTCAGATCATCTTCGTGTTAATTCTGTCCGA TCTAAATCAAGCCGGACTTATCCTCCTCCTACTCAACCAAACGCTGTCGTTTCTCCCGAG TTTCTTCTCCCTTGTGGACTTCCTGTTACGGATCTGCTTGAACCTCAAATCGATCCTTGC TTGAAATTCGTTGATTTGGTTGAGAAGATGGCTCAAGTTTATCGTAGGATTGAGAATTGT TCTCAGTTTGAGAAATCTGGGGCTTATTTAGAGCAATGCGCTATCTTCCGGGGCATTTCT GATCCGAAACTGTTCCGGCGGAGTCTCCGGTCGTCTAGGCAACATGCGGTGGATGTTCAC GCGAAAGTCGTGTTAGCCTCGTGGCTTAGGTTCGAGAGGAGGGAGGATGAGTTGATTGGA ACGACTTCTATGGATTGTTGTGGCAGGAATTTGGAATGTCCAAAGGCTACTCTTGTTTCT GGTTATGATCCTGAATCTGTTTATGATCCATGTGTTTGCTCTGGAGCTTCTAGATCAGAG ATGATGAATGAAGATGAATGTTCTACTTCTCAAGAAGTAGACTATGATATGTCATTTTGT ATTGGTGATGAAGAGGTTCGTTGTGTGAGGTACAAAATCGCGTCTTTGTCCAGACCTTTC AAGGCGATGTTATACGGTGGGTTTAGAGAAATGAAACGAGCCACGATCAATTTTACGCAG AATGGAATCTCTGTTGAAGGGATGAGAGCTGCAGAGATTTTCAGCAGGACCAACAGGTTA GATAACTTCCCTCCTAATGTTGTCTTGGAGCTTCTTAAGCTTGCAAATCGGTTCTGCTGC GATGAATTGAAATCCGCTTGTGATTCGCATTTGGCACATCTTGTTAATTCTCTGGATGAG GCAATGTTGTTGATTGAGTACGGATTAGAAGAGGCTGCGTATCTTCTGGTGGCAGCTTGT CTTCAGGTTTTTCTCAGGGAATTGCCTAGCTCTATGCATAATCCGAATGTTATAAAGATT TTCTGCAGCGCCGAGGGACGGGAAAGACTGGCGTCTCTTGGCCATGCTTCTTTTACATTG TACTTCTTCTTGAGCCAGATTGCGATGGAAGATGATATGAAATCTAACACAACTGTGATG CTCTTAGAACGTCTGGTTGAATGTGCGGTGGATAGTTGGGAGAAACAGCTTGCGTATCAC CAATTAGGAGTGGTGATGCTAGAGAGAAAAGAATATAAGGATGCTCAGAGATGGTTTAAC GCAGCGGTTGAGGCTGGCCATCTTTACTCTCTCGTGGGTGTTGCCAGGACTAAGTTTAAG CGTGACCACAGGTACTCGGCTTATAAGATCATCAATTCCTTGATTTCGGATCACAAGGCT ACTGGGTGGATGCACCAGGAAAGGTCCTTGTATTGCAGTGGTAAAGAAAAGCTGCTTGAT TTGGATACAGCTACCGAGTTTGACCCTACTTTGACATTCCCCTACAAGTTCAGGGCAGTG GCTTTGGTGGAAGAAAACCAGTTTGGAGCTGCAATCGCAGAACTGAACAAGATTCTTGGA TTCAAGGCCTCTCCTGACTGTCTAGAGATGAGGGCATGGATTTCTATAGGTATGGAGGAT TACGAGGGTGCTTTGAAAGATATTCGGGCGCTTTTGACATTGGAGCCAAATTTTATGATG TTTAACTGGAAAATCCATGGTGATCATATGGTGGAGTTGCTCCGTCCGCTAGCCCAGCAG TGGAGCCAGGCTGATTGCTGGATGCAGCTGTATGATCGTTGGTCTTCTGTGGATGATATT GGATCTCTAGCAGTTGTTCATCATATGCTTGCAAATGATCCAGGGAAGAGTCTTTTACGG TTCAGACAGTCTCTTCTTCTCCTACGGCTCAATTGTCAAAAGGCAGCAATGCGTAGTCTA AGGCTGGCTCGAAACCATTCAAAGTCGGAGCATGAGAGACTTGTGTATGAAGGATGGATA CTGTATGATACAGGCCACCGCGAGGAAGCCCTTGCCAAAGCGGAGGAATCCATTTCCATC CAAAGGTCGTTTGAAGCGTTTTTCCTCAAAGCTTACGCCCTTGCAGACTCTACGCTTGAC CCGGACTCCTCTAATTATGTGATTCAGCTCCTTCAAGAAGCGCTTAAGTGCCCCTCAGAT GGTCTCCGTAAGGGACAAGCATTGAACAACCTGGGGAGCGTATACGTGGATTGTGAAAAG CTGGATCTTGCAGCTGATTGCTACACAAACGCGCTCACCATCAAGCATACACGAGCTCAC CAAGGTCTTGCACGTGTTTATCACCTGAAAAACCAACGGAAAGCTGCTTATGATGAAATG ACAAAGCTAATAGAGAAGGCTCAGAACAATGCGTCGGCATATGAGAAGCGCTCTGAATAT TGTGACCGCGAGATGGCTCAGAGCGACCTTTGCCTGGCAACACAACTTGACCCTCTCCGA ACCTATCCTTACAGATACAGAGCCGCAGTTCTTATGGACGACCACAAAGAAAGTGAAGCC ATAGACGAGCTTTCGAGGGCGATATCATTTAAACCAGATCTTCAGCTATTACATCTACGA GCAGCATTCTATGATTCAATGGGAGAAGGAGCGTCTGCTATAAAAGATTGTGAAGCAGCA TTATGTATTGATCCAGGTCATGCAGATACACTCGAGCTCTACCACAAAGCTCGTGAACCA AACGACCAAAAGTAGAACAAAACTATCAATTTGGTTTGATGGGCAAAAATATTTCTCTTC TTCCCTCCTGGTATGGCTTCTACACTGTTTCATTTTCCTTGTGCAAAACAGAACTTGGAG CAAATCAAAGAAAGCTTGGTTTGAGTGAACCAGGGAAAAAGCAAGCATAGCCATGTAAAT AGAAACTTTTTTATATATTATTTTTTTTTCTCTATAATTTTGGTTATTGGGGGGTGAGAG GATACTTTATAAGTAGTGCAGAGAGTGTTTCTTGCTGCTAAAGATAATACGTTTTCTGGC CAACAAAAAAAAGGGAAAACCACGAAGAAGAACTTACCTCTGGTGAAATTGGACTTCTTC TTCTGTCCTATTTCTAGATGTATTATTGCTTCTTTCTTTTTATTTATTTTTTTCATCACT GGAATTATGTAAAATTGTATCTGTAACTTCTTCACCTTTTTTTTTTTTACATGTTTCTTG TATTGATTCTCCAAAAGCATCCGGGGATTTGTTTTTTATCCTCCTGAAACAAGAAAACAA AGAAACTATTCATTCTTCTTACATTTCAACATGTTTCACCAAGAGTATCCTCA