Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G50530.2
CDS Infomation	\| CDPK-related kinase \| Chr3:18753833-18756487 FORWARD LENGTH=1899 \| 201606
Sequence	ATGGGTCTATGTACTTCGAAACCGAATTCATCTAATTCCGATCAAACTCCGGCGAGGAAT AGTCCACTTCCGGCGTCTGAATCCGTCAAGCCTTCGAGCTCTTCCGTTAATGGTGAAGAT CAGTGTGTAACAACAACGAACAATGAAGGCAAAAAGTCTCCGTTTTTCCCTTTTTATAGT CCAAGTCCAGCTCACTATTTCTTCTCCAAGAAGACTCCGGCGAGATCTCCGGCGACTAAT TCGACTAATTCGACTCCGAAGCGATTCTTTAAACGGCCGTTTCCTCCTCCGTCTCCGGCT AAACATATCAGAGCTGTTTTAGCGAGAAGGCATGGTTCTGTGAAGCCTAATTCGTCGGCG ATCCCTGAAGGTAGTGAAGCTGAAGGAGGTGGTGTTGGATTGGATAAAAGCTTTGGTTTT TCCAAGAGTTTTGCGAGTAAGTATGAGCTTGGTGATGAAGTTGGTCGTGGTCATTTTGGT TATACTTGTGCTGCTAAGTTTAAGAAGGGTGATAATAAAGGTCAACAAGTCGCGGTTAAA GTCATTCCCAAAGCAAAGATGACGACGGCTATTGCAATTGAAGATGTGAGAAGGGAAGTG AAGATATTGAGGGCTTTGTCTGGTCATAACAATCTTCCTCATTTCTATGATGCTTATGAG GATCATGATAATGTCTATATAGTGATGGAACTATGTGAAGGAGGAGAGCTTTTGGATAGA ATACTTTCAAGAGGTGGGAAGTACACAGAGGAGGATGCAAAGACCGTTATGATACAAATA TTGAATGTGGTTGCTTTTTGTCATCTGCAAGGCGTTGTACACAGAGATCTTAAACCAGAG AATTTTCTTTTTACCTCAAAAGAAGACACCTCTCAATTGAAGGCAATAGATTTCGGTTTG TCAGATTACGTGAGACCAGGTAAAGCCCTTAGATTATATGCTATATGTAAACTTAGATTC CAGAACCTAGAGACCAGCATTTGCTTATATGCGTTGACAATTGCATTTGCAGATGAGAGG CTCAATGACATTGTTGGTAGTGCATACTATGTAGCACCTGAAGTTCTGCATAGATCTTAC AGTACAGAAGCTGATATTTGGAGTGTTGGTGTGATTGTATATATTCTATTGTGTGGAAGC CGACCGTTTTGGGCTAGGACAGAATCAGGAATCTTTCGTGCTGTTCTAAAAGCTGATCCA AGTTTTGATGACCCTCCTTGGCCTTTGTTATCTTCAGAGGCAAGAGATTTTGTAAAGCGG TTGCTAAACAAAGATCCGCGTAAAAGATTAACAGCTGCTCAAGCCTTAAGTCATCCATGG ATAAAGGACTCAAACGACGCAAAGGTTCCAATGGATATTCTGGTTTTCAAACTTATGAGA GCTTATTTACGATCATCATCTCTCCGTAAAGCTGCATTAAGAGCTTTATCGAAAACACTT ACGGTTGATGAACTGTTTTATCTGAGAGAGCAGTTTGCTTTGTTAGAACCTAGTAAGAAC GGAACCATAAGTCTAGAAAACATCAAATCAGCTCTGATGAAAATGGCAACAGATGCGATG AAGGACTCACGTATTCCAGAGTTCTTAGGACAACTGAGTGCTCTTCAATATAGAAGAATG GACTTTGAGGAATTCTGTGCAGCGGCATTGAGTGTTCACCAGCTAGAAGCTCTTGATCGA TGGGAACAACACGCTCGTTGTGCTTATGAGCTTTTCGAAAAGGAAGGGAACCGACCAATC ATGATCGATGAACTCGCTTCGGAACTTGGTCTTGGCCCTTCTGTACCGGTTCACGCAGTG CTTCACGATTGGCTTAGACATACCGATGGGAAGCTTAGCTTTCTCGGATTTGTGAAATTG CTACATGGTGTGTCTAGCCGCACGATCAAAGCTCATTAG

Peptide Sequence

PEP ID	AT3G50530.2
PEP Infomation	\| CDPK-related kinase \| Chr3:18753833-18756487 FORWARD LENGTH=632 \| 201606
Sequence	MGLCTSKPNSSNSDQTPARNSPLPASESVKPSSSSVNGEDQCVTTTNNEGKKSPFFPFYS PSPAHYFFSKKTPARSPATNSTNSTPKRFFKRPFPPPSPAKHIRAVLARRHGSVKPNSSA IPEGSEAEGGGVGLDKSFGFSKSFASKYELGDEVGRGHFGYTCAAKFKKGDNKGQQVAVK VIPKAKMTTAIAIEDVRREVKILRALSGHNNLPHFYDAYEDHDNVYIVMELCEGGELLDR ILSRGGKYTEEDAKTVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKEDTSQLKAIDFGL SDYVRPGKALRLYAICKLRFQNLETSICLYALTIAFADERLNDIVGSAYYVAPEVLHRSY STEADIWSVGVIVYILLCGSRPFWARTESGIFRAVLKADPSFDDPPWPLLSSEARDFVKR LLNKDPRKRLTAAQALSHPWIKDSNDAKVPMDILVFKLMRAYLRSSSLRKAALRALSKTL TVDELFYLREQFALLEPSKNGTISLENIKSALMKMATDAMKDSRIPEFLGQLSALQYRRM DFEEFCAAALSVHQLEALDRWEQHARCAYELFEKEGNRPIMIDELASELGLGPSVPVHAV LHDWLRHTDGKLSFLGFVKLLHGVSSRTIKAH

Transcript Sequence

Transcript ID	AT3G50530.2
Transcript Infomation	\| CDPK-related kinase \| Chr3:18753541-18756773 FORWARD LENGTH=2477 \| 201606
Sequence	GTTAATTAAAAAGCGAACGTATCGTCGTTTCTCTTTTTAACTCATTCTCTTTGGATCCAA ATCTTTCGCTTTGGAATTCGCCATTGACAAAGTACTCAATTCCAAAACAAAGAATAAGCA AACAACAACAATTTTCACTTCCTTCAAAAATTATAAAAATCCAGTTTTTATCTTTGCAAG ATTCAAAAGTTTGAATTTTTACTTGTTTTGATTTCTGGGTTTTGTTTGTTTTTTGATTTC GGTAATGATACAATTGAGATTTTGATTTCGTGTGATGTTGAGAGATTCTTAAATGGGTCT ATGTACTTCGAAACCGAATTCATCTAATTCCGATCAAACTCCGGCGAGGAATAGTCCACT TCCGGCGTCTGAATCCGTCAAGCCTTCGAGCTCTTCCGTTAATGGTGAAGATCAGTGTGT AACAACAACGAACAATGAAGGCAAAAAGTCTCCGTTTTTCCCTTTTTATAGTCCAAGTCC AGCTCACTATTTCTTCTCCAAGAAGACTCCGGCGAGATCTCCGGCGACTAATTCGACTAA TTCGACTCCGAAGCGATTCTTTAAACGGCCGTTTCCTCCTCCGTCTCCGGCTAAACATAT CAGAGCTGTTTTAGCGAGAAGGCATGGTTCTGTGAAGCCTAATTCGTCGGCGATCCCTGA AGGTAGTGAAGCTGAAGGAGGTGGTGTTGGATTGGATAAAAGCTTTGGTTTTTCCAAGAG TTTTGCGAGTAAGTATGAGCTTGGTGATGAAGTTGGTCGTGGTCATTTTGGTTATACTTG TGCTGCTAAGTTTAAGAAGGGTGATAATAAAGGTCAACAAGTCGCGGTTAAAGTCATTCC CAAAGCAAAGATGACGACGGCTATTGCAATTGAAGATGTGAGAAGGGAAGTGAAGATATT GAGGGCTTTGTCTGGTCATAACAATCTTCCTCATTTCTATGATGCTTATGAGGATCATGA TAATGTCTATATAGTGATGGAACTATGTGAAGGAGGAGAGCTTTTGGATAGAATACTTTC AAGAGGTGGGAAGTACACAGAGGAGGATGCAAAGACCGTTATGATACAAATATTGAATGT GGTTGCTTTTTGTCATCTGCAAGGCGTTGTACACAGAGATCTTAAACCAGAGAATTTTCT TTTTACCTCAAAAGAAGACACCTCTCAATTGAAGGCAATAGATTTCGGTTTGTCAGATTA CGTGAGACCAGGTAAAGCCCTTAGATTATATGCTATATGTAAACTTAGATTCCAGAACCT AGAGACCAGCATTTGCTTATATGCGTTGACAATTGCATTTGCAGATGAGAGGCTCAATGA CATTGTTGGTAGTGCATACTATGTAGCACCTGAAGTTCTGCATAGATCTTACAGTACAGA AGCTGATATTTGGAGTGTTGGTGTGATTGTATATATTCTATTGTGTGGAAGCCGACCGTT TTGGGCTAGGACAGAATCAGGAATCTTTCGTGCTGTTCTAAAAGCTGATCCAAGTTTTGA TGACCCTCCTTGGCCTTTGTTATCTTCAGAGGCAAGAGATTTTGTAAAGCGGTTGCTAAA CAAAGATCCGCGTAAAAGATTAACAGCTGCTCAAGCCTTAAGTCATCCATGGATAAAGGA CTCAAACGACGCAAAGGTTCCAATGGATATTCTGGTTTTCAAACTTATGAGAGCTTATTT ACGATCATCATCTCTCCGTAAAGCTGCATTAAGAGCTTTATCGAAAACACTTACGGTTGA TGAACTGTTTTATCTGAGAGAGCAGTTTGCTTTGTTAGAACCTAGTAAGAACGGAACCAT AAGTCTAGAAAACATCAAATCAGCTCTGATGAAAATGGCAACAGATGCGATGAAGGACTC ACGTATTCCAGAGTTCTTAGGACAACTGAGTGCTCTTCAATATAGAAGAATGGACTTTGA GGAATTCTGTGCAGCGGCATTGAGTGTTCACCAGCTAGAAGCTCTTGATCGATGGGAACA ACACGCTCGTTGTGCTTATGAGCTTTTCGAAAAGGAAGGGAACCGACCAATCATGATCGA TGAACTCGCTTCGGAACTTGGTCTTGGCCCTTCTGTACCGGTTCACGCAGTGCTTCACGA TTGGCTTAGACATACCGATGGGAAGCTTAGCTTTCTCGGATTTGTGAAATTGCTACATGG TGTGTCTAGCCGCACGATCAAAGCTCATTAGAAGGGTTTTGAAACTTTGAATGATATGTA TGAAATTTGTCTGAGCTCTAAGGTCTCATTCTCCTAGGAGTTATAATATGTGGCTTTTGA CTTTTGTTATGAAAGCTGAGAAGCAAAGATTATAAAAAAAAATGAGTGTAGCAAAAAAAG AGAGAAGTGTGTTAGTTTTGTAGAGAATGATATGATATTTTCCCCAAATTTGGTAACTTA TGACGATTGATGATATTTCTGACATTTTTAGATTTTGCTTTTTTTGACACCAATCTTATT TCCAAATTTTTTTCTCT