Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G50390.1
CDS Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr3:18702137-18703546 FORWARD LENGTH=1410 | 201606
Sequence

ATGTCTTCAATGCATAAGAAAGGTACAAGCAGAGACGTAAATAGCCAAGCATTTACAAAA
CTAACGAAAGTAGAAACTATTCCAGATCCAGACATTTACGACATAACCTACGTAGATATC
TCTCCCTCCGAAGGCTCCTCTTCACCATTATCCAAATCACCATGGTCCGTTCAAGTCGAT
CCATCCGCCGTAGATTCTCCGTATCATTCGGTGAAAGTTACGACGGATACAACCAAAGAA
AAATCAACCAACCACTCTCCTAATATTCTCTTGGGGTCACTTGTTCGCGAAGAAGGTCAT
ATCTATTCATTAGCTACATCAGGAGATTTACTCTACACAGGATCTGATTCCAAGAACATT
AGGGTTTGGAAAAACCATGTTGAGTTCTCGAGTTTTAAATCGAATAGTGGATTGGTTAAA
GCCATTGTTCTTGCTGGAGATAAAATCTTTACCGGTCATCAAGATGGTAAGATCCGTGTG
TGGAAAGCTGCATCTAAAGAATCAAACGTTCATCGTCGTGTAGGTACAATGCCTAACCTT
CTCGATTATATAAGAAACTCCATTGTTCCTTCTTCTTACTTCAACTTCACGCGACGTAAT
CGTAGCAGTGCTGCGTTAGGGTTTCGTCATTTAGACGCGATTTCTTGTCTTGCGTTAAGC
GAAGATAAACGGTTGTTGTACTCTGGTTCTTGGGATAAAACGTTTAAGGTTTGGAGAGTT
TCGGATTTGCGGTGTGTGGAATCTGTGAACGCTCATGAAGATGCGGTAAACGCTGTCGTT
TCCGGTTTTGACGGTTTGGTTTTTACCGGTTCAGCTGATGGAACGGTTAAGGTTTGGAGA
AGAGAAGATCAAGCGAAGGATACGAAACATTTCTTCTCTGAGACGTTATTGAAACAAGAC
TGTGCCGTTACGGCGATCGCTGTAGATCAAAGCGCGACGTTAGTTTATTGTGGTTCGTCT
GACGGAACCGTTAATTTTTGGGAACGTGAGAATAATATGAAAAACGGCGGCGTTTTGAAA
GGTCATAAACTCGCCGTGCTTTGTCTTGTCGCGGCGGGGAATTTGATGTTTAGTGGTTCT
GCTGATTTAGGGATACGTGTGTGGAGGAGACCAGAAGGTGGAGGTGAGCATGTTTGTCTT
TCGGTTTTGACCGGACATGCTGGTCCGGTGAAGTGTTTGGCGGTGGAGAGAGATCAAGAA
TCGGTTTCCGGTGAGAGACGGTGGATTGTGTATAGTGGGAGTTTAGATAGATCGGTGAAG
ATGTGGCGTGTGTCGGAGAGTTCACCGCCGATGGTGAATCAAGAGTTTAAGTTGCCGGAT
CAGTTTGGTGGTGGTGGTGGTGGTGGTCCGGCGGAGTTAACGGTGGCTCCTAGCTTCTCG
GCTCAAGGGAGGATTAGTCCACAAAAATAG

Peptide Sequence

PEP ID

AT3G50390.1
PEP Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr3:18702137-18703546 FORWARD LENGTH=469 | 201606
Sequence

MSSMHKKGTSRDVNSQAFTKLTKVETIPDPDIYDITYVDISPSEGSSSPLSKSPWSVQVD
PSAVDSPYHSVKVTTDTTKEKSTNHSPNILLGSLVREEGHIYSLATSGDLLYTGSDSKNI
RVWKNHVEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHRRVGTMPNL
LDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRV
SDLRCVESVNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQD
CAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNLMFSGS
ADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVK
MWRVSESSPPMVNQEFKLPDQFGGGGGGGPAELTVAPSFSAQGRISPQK

Transcript Sequence

Transcript ID

AT3G50390.1
Transcript Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr3:18702060-18703731 FORWARD LENGTH=1672 | 201606
Sequence

CTTCTTCTCCGTAACCTAAAACTCTGTCTAATTATAAATCCAACCAAAACAAAAAAAAAG
TCCATCATCTTCTTCTTATGTCTTCAATGCATAAGAAAGGTACAAGCAGAGACGTAAATA
GCCAAGCATTTACAAAACTAACGAAAGTAGAAACTATTCCAGATCCAGACATTTACGACA
TAACCTACGTAGATATCTCTCCCTCCGAAGGCTCCTCTTCACCATTATCCAAATCACCAT
GGTCCGTTCAAGTCGATCCATCCGCCGTAGATTCTCCGTATCATTCGGTGAAAGTTACGA
CGGATACAACCAAAGAAAAATCAACCAACCACTCTCCTAATATTCTCTTGGGGTCACTTG
TTCGCGAAGAAGGTCATATCTATTCATTAGCTACATCAGGAGATTTACTCTACACAGGAT
CTGATTCCAAGAACATTAGGGTTTGGAAAAACCATGTTGAGTTCTCGAGTTTTAAATCGA
ATAGTGGATTGGTTAAAGCCATTGTTCTTGCTGGAGATAAAATCTTTACCGGTCATCAAG
ATGGTAAGATCCGTGTGTGGAAAGCTGCATCTAAAGAATCAAACGTTCATCGTCGTGTAG
GTACAATGCCTAACCTTCTCGATTATATAAGAAACTCCATTGTTCCTTCTTCTTACTTCA
ACTTCACGCGACGTAATCGTAGCAGTGCTGCGTTAGGGTTTCGTCATTTAGACGCGATTT
CTTGTCTTGCGTTAAGCGAAGATAAACGGTTGTTGTACTCTGGTTCTTGGGATAAAACGT
TTAAGGTTTGGAGAGTTTCGGATTTGCGGTGTGTGGAATCTGTGAACGCTCATGAAGATG
CGGTAAACGCTGTCGTTTCCGGTTTTGACGGTTTGGTTTTTACCGGTTCAGCTGATGGAA
CGGTTAAGGTTTGGAGAAGAGAAGATCAAGCGAAGGATACGAAACATTTCTTCTCTGAGA
CGTTATTGAAACAAGACTGTGCCGTTACGGCGATCGCTGTAGATCAAAGCGCGACGTTAG
TTTATTGTGGTTCGTCTGACGGAACCGTTAATTTTTGGGAACGTGAGAATAATATGAAAA
ACGGCGGCGTTTTGAAAGGTCATAAACTCGCCGTGCTTTGTCTTGTCGCGGCGGGGAATT
TGATGTTTAGTGGTTCTGCTGATTTAGGGATACGTGTGTGGAGGAGACCAGAAGGTGGAG
GTGAGCATGTTTGTCTTTCGGTTTTGACCGGACATGCTGGTCCGGTGAAGTGTTTGGCGG
TGGAGAGAGATCAAGAATCGGTTTCCGGTGAGAGACGGTGGATTGTGTATAGTGGGAGTT
TAGATAGATCGGTGAAGATGTGGCGTGTGTCGGAGAGTTCACCGCCGATGGTGAATCAAG
AGTTTAAGTTGCCGGATCAGTTTGGTGGTGGTGGTGGTGGTGGTCCGGCGGAGTTAACGG
TGGCTCCTAGCTTCTCGGCTCAAGGGAGGATTAGTCCACAAAAATAGTTGTTTGTTTTTT
GTATGTAACCAACATCGAACTATTCAAACGTGTATGTAATTGTAATTTCTTCTGTTAAAA
GAGATTTTGATCCAACAAGATTCAAGCATTTTTCATTTCGTGGAGTTCCGGTTCACCTTA
ACCGGGAATCTGACAAAACATTACTTACTTCCATCAAAACTGTAAAATTTCA