Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G50180.1
CDS Infomation	\| transmembrane protein%2C putative (DUF247) \| Chr3:18604943-18607162 REVERSE LENGTH=1767 \| 201606
Sequence	ATGGAAACTTTTGGTACTATTCCACCACCACCACCACTACCACCCCGTCTAGAATTACGA CGACAACGAGCACCACCACCACAACCACCACCTCCACCACCACCACCACCACCACCTCCA CCACCACGGTTAGGACCACGACTACGACTACGACTCCTACCACCACCACGACAACAACTA CTACGATTACGAAAGCAACAGCCACTAGTACTACCTGAACCATTGCCATTACGACCACGG GCGATTCCTTGGCTTACTGGACATGATGTCAAAAAAGGAAAATCTTATGACAAGTTGAGA GAATACGTCGAAAATGTCCGTAGACAAAACGAAGAATCCGAACGTGTCGTTTTACCCAAA AGTATCAGCTATGAAGACCAAAACTTGGAGAACCAGCAAGACACTCGTTCTAAACCTGGA ATAAACGAGGTGGTCGAAGGGAGCGGGACCAAACGACTTGAGTGGGTGATCTCAATAAAA GACAAGCTCGAGCAAGCATACAGAAACGATGACAGAACTAGCTGGGGCAAGCTCTGTATA TACAAAGTTCCACATTACCTACATGGAAACGACAAGAAGTCGTATTTCCCTCAGACTGTC TCACTTGGTCCATATCACCATGGGAGACAGCAAACACAGTCCATGGAGTGCCATAAATGG CGTGCCGTCAATATGGTATTAAAACGTACGAACCAAGGCATTGAAGTGTTTCTTGACGCC ATGATAGAGCTGGAGGAGAAGGCTCGTGCTTGCTACGAAGGTTCCATTGTTTTGAGCAGT AACGAGTTCACAGAAATGCTTCTTCTTGATGGCTGTTTTATTCTCGAGCTCCTCCAAGGA GTCAATGAAGGATTCTTGAAACTCGGATATGATCATAACGATCCAGTTTTCGCGGTTCGA GGATCGATGCATTCGATTCAACGTGACATGATAATGCTGGAAAATCAACTTCCTTTGTTC GTACTCAACCGGTTATTAGAGTTACAACCCGGTACACAGAACCAAACTGGTTTAGTGGAA TTAGTGGTTCGGTTCTTTATTCCTCTAATGCCAACGGCCGAGACGTTGACCGAGAACTCG CCTCCAAGAGGCGTATCCAATGGAGAGTTGCACTGTCTTGATGTTTTCCATCGAAGTCTG CTCTTCCCAAGATCATCCGGAAAGGCAAATTACTCACGCGTGGCTGACAAACACCTACAA CGAGTGATACCTACCGTGACCGAACTAAGAGATGCCGGTTTTAAGTTCAAGCTAAATAAA ACCGATCGGTTTTGGGATATTAAATTCAGCAATGGTTACCTGGAGATACCCGGTCTACTT ATCCATGATGGTACCAAATCTCTATTCTTGAATCTCATTGCTTTCGAGCAGTGTCATATC GAGTCGAGCAATGATATAACATCCTACATAATATTTATGGACAATTTAATAGATTCTCCT GAAGATATTAGTTATTTGCATCACTGTGGTATTATTGAGCACTCGCTAGGAAGTAATTCT GAAGTTGCGGATATGTTCAACCAGTTATGTCAGGAAGTGGTTTTCGACACCAAAGATATT TATCTATCTCAATTGTTGATTGAGGTTCATCGCTGTTATAAACAAAACTACTCCAGGAAG TTGAATTCTTTGAAAACGACCTTGATACTCAAGTACTTAGATAACCCTTGGGCATATTTG TCTTTCTTTGCTGCAGTTATTCTACTAATTCTTACATTCTCTCAAAGTTATTTTGCTGCT TATGCTTATTTTAATCCGTCTTCATAA

Peptide Sequence

PEP ID	AT3G50180.1
PEP Infomation	\| transmembrane protein%2C putative (DUF247) \| Chr3:18604943-18607162 REVERSE LENGTH=588 \| 201606
Sequence	METFGTIPPPPPLPPRLELRRQRAPPPQPPPPPPPPPPPPPPRLGPRLRLRLLPPPRQQL LRLRKQQPLVLPEPLPLRPRAIPWLTGHDVKKGKSYDKLREYVENVRRQNEESERVVLPK SISYEDQNLENQQDTRSKPGINEVVEGSGTKRLEWVISIKDKLEQAYRNDDRTSWGKLCI YKVPHYLHGNDKKSYFPQTVSLGPYHHGRQQTQSMECHKWRAVNMVLKRTNQGIEVFLDA MIELEEKARACYEGSIVLSSNEFTEMLLLDGCFILELLQGVNEGFLKLGYDHNDPVFAVR GSMHSIQRDMIMLENQLPLFVLNRLLELQPGTQNQTGLVELVVRFFIPLMPTAETLTENS PPRGVSNGELHCLDVFHRSLLFPRSSGKANYSRVADKHLQRVIPTVTELRDAGFKFKLNK TDRFWDIKFSNGYLEIPGLLIHDGTKSLFLNLIAFEQCHIESSNDITSYIIFMDNLIDSP EDISYLHHCGIIEHSLGSNSEVADMFNQLCQEVVFDTKDIYLSQLLIEVHRCYKQNYSRK LNSLKTTLILKYLDNPWAYLSFFAAVILLILTFSQSYFAAYAYFNPSS

Transcript Sequence

Transcript ID	AT3G50180.1
Transcript Infomation	\| transmembrane protein%2C putative (DUF247) \| Chr3:18604941-18607162 REVERSE LENGTH=1769 \| 201606
Sequence	ATGGAAACTTTTGGTACTATTCCACCACCACCACCACTACCACCCCGTCTAGAATTACGA CGACAACGAGCACCACCACCACAACCACCACCTCCACCACCACCACCACCACCACCTCCA CCACCACGGTTAGGACCACGACTACGACTACGACTCCTACCACCACCACGACAACAACTA CTACGATTACGAAAGCAACAGCCACTAGTACTACCTGAACCATTGCCATTACGACCACGG GCGATTCCTTGGCTTACTGGACATGATGTCAAAAAAGGAAAATCTTATGACAAGTTGAGA GAATACGTCGAAAATGTCCGTAGACAAAACGAAGAATCCGAACGTGTCGTTTTACCCAAA AGTATCAGCTATGAAGACCAAAACTTGGAGAACCAGCAAGACACTCGTTCTAAACCTGGA ATAAACGAGGTGGTCGAAGGGAGCGGGACCAAACGACTTGAGTGGGTGATCTCAATAAAA GACAAGCTCGAGCAAGCATACAGAAACGATGACAGAACTAGCTGGGGCAAGCTCTGTATA TACAAAGTTCCACATTACCTACATGGAAACGACAAGAAGTCGTATTTCCCTCAGACTGTC TCACTTGGTCCATATCACCATGGGAGACAGCAAACACAGTCCATGGAGTGCCATAAATGG CGTGCCGTCAATATGGTATTAAAACGTACGAACCAAGGCATTGAAGTGTTTCTTGACGCC ATGATAGAGCTGGAGGAGAAGGCTCGTGCTTGCTACGAAGGTTCCATTGTTTTGAGCAGT AACGAGTTCACAGAAATGCTTCTTCTTGATGGCTGTTTTATTCTCGAGCTCCTCCAAGGA GTCAATGAAGGATTCTTGAAACTCGGATATGATCATAACGATCCAGTTTTCGCGGTTCGA GGATCGATGCATTCGATTCAACGTGACATGATAATGCTGGAAAATCAACTTCCTTTGTTC GTACTCAACCGGTTATTAGAGTTACAACCCGGTACACAGAACCAAACTGGTTTAGTGGAA TTAGTGGTTCGGTTCTTTATTCCTCTAATGCCAACGGCCGAGACGTTGACCGAGAACTCG CCTCCAAGAGGCGTATCCAATGGAGAGTTGCACTGTCTTGATGTTTTCCATCGAAGTCTG CTCTTCCCAAGATCATCCGGAAAGGCAAATTACTCACGCGTGGCTGACAAACACCTACAA CGAGTGATACCTACCGTGACCGAACTAAGAGATGCCGGTTTTAAGTTCAAGCTAAATAAA ACCGATCGGTTTTGGGATATTAAATTCAGCAATGGTTACCTGGAGATACCCGGTCTACTT ATCCATGATGGTACCAAATCTCTATTCTTGAATCTCATTGCTTTCGAGCAGTGTCATATC GAGTCGAGCAATGATATAACATCCTACATAATATTTATGGACAATTTAATAGATTCTCCT GAAGATATTAGTTATTTGCATCACTGTGGTATTATTGAGCACTCGCTAGGAAGTAATTCT GAAGTTGCGGATATGTTCAACCAGTTATGTCAGGAAGTGGTTTTCGACACCAAAGATATT TATCTATCTCAATTGTTGATTGAGGTTCATCGCTGTTATAAACAAAACTACTCCAGGAAG TTGAATTCTTTGAAAACGACCTTGATACTCAAGTACTTAGATAACCCTTGGGCATATTTG TCTTTCTTTGCTGCAGTTATTCTACTAATTCTTACATTCTCTCAAAGTTATTTTGCTGCT TATGCTTATTTTAATCCGTCTTCATAACT