Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G50010.1
CDS Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr3:18537248-18539557 REVERSE LENGTH=2310 \| 201606
Sequence	ATGGATCCGGATCCGGATTCGGAGTCGGAGCTCTTATCACTCCTTACTCAACTAATGTTT GTCGAGTACTTTAACTTGTACTGGGATGCCACTCCATTGCTTACCGAACTAATCCTTCTA GTCAGCTCAATGGATTTGGATTCGCAGCCGAAGCCGGAGTCAGAGTTCATGTCACTCACT ACTCAAGCAATATCTCTCTTCAACTCTATGGATTTGGAGTCTCAGTCCAAACTGCTGTCG GATCTCATGTCAATGGTTTTTCAAAATTTATCTCTCTTTAACTCTGCTTTGGACTCGGAA GCCACAACACTCTTTGGTAAAATAATCTCTCTGGTCAGCTCAATGGATTTGACTACAGAG GAGAAGCCAGAGTCTGATGAGCTAGTGTTACTCATCCAAGAGATACTCTCTCTAGTCAAC TCTAGGGATTCAGATTCCCAGCCAAAGCGGCTGGTGGAGCTAATATCATTCATTTCTCAA AAGATTTCTCTCATTGATGAAACTTTGGAAGTCAAACCGGAGCCGGAACTTATCTCACTC ACTCATCAAATACTCTCCCTCGTCGTCTCTATGAACTCAAACTCGGGGGAGTATATTTCC TTGTGCCCTCAAGCACAAGTAAAACTGGAAAACGGAAGATTTCGTGTTCTTGAAGACGTC TCGTGGCGCACCAATAACAAGTGGCATTGCCTTTCTGTAAACTGGCGGACATTCAAGTTA TCAAGAGAAGAAGACACTCTCCATTTTATCTGCATAGGTTGCAATGGCGATAACCATAAA GAATTTAACAATGTTCCTGTTGAGATCAACCATCCTCTTCATCCAAATCATTCTCTCCAG CTTGTCGTGTTGCAGGAAGATAGTACCAGGGAATGCTATTGTTGTGATGAAGCTCTTAGC CGTATACTTTATTATTGCTCGGCTTGCGATTTTGCTATAAGTATACTTTGTGCGAGGAAA CCACCAGTCTTTTTGATAAACCATCACCGTCCGGAGTGGCATGGTCATCCTCTTGCTCTG TTTCCAAGACAAGCTTTCTTAACTTGCAACCTTTGCGCCTTGGCCGATCCAAGCTCTCCT ATCTATATGTGTCCGCCTTGTGACTTTGTGACTCATCTAAGATGTATCAACTTACCACGT GTCATAAAGATATCTCGCCATAGCCATCGTATCTATTTTACTTCTTCGTTTGAGAAAGAA GGTTTGTCTTGTGGTGTTTGTCGCAGAAAGATCAACAAATTATACGGAGGCTATTCTTGT ATCAAAAATGGTTGTTGGTATGCGGCACATTCAAGATGTGCAACACAAAAAAATGTGTGG GATGGTGTAGAACTTGAGGGAGTGCCAGAAGAAAATGAGGAAGAAGTAGATCCACCGTTT GCAACGAAAGGAAGTGGAGTCATACGACATTTCACTCATCGTCATCTTTTGAGACTTGAT GTGGACACGGGAAGAGATTACGACGAGGATAAGCTGTGTAACATATGCATTACGCCAATC TATTTTGGTAACTTCTACTCGTGTACGCCTAGCTGTGATTATAATCTCCACGAAACATGC GCAAATTTTCCTCGTAAAATAGATCATCCGATACATCCACATCAGCTTAATTTAGAGGCA GGATACGGTGATGGGGAGATCAATGAGTATGAATGCTCGGTGTGTCCTAGGAAGCGTACT GTCGGTTTCCTCTATCGGTGCAGAAAATGTTTTTATCTACACGTGCAGTGTGCCATAGCT TCCGAGCCACTAGATCATCCAAGTCATATACATCCTTTATACCTCACATCCAAACCAGAC GAAGAGCAAAGAAAATGTTCGGTTTGCAAGAAGTCAGGGCATTGTCCCACCAAGGAAACG TTCAATTGCATCGAGGAGTGCGACTTTGCTTTGTGTTTTGAGTGTGCTACTTTAGCTCAA AAGGTGAGGTATAAGCATGATAAGCATGTGCTCACTCTTTCTTATGGGGACAAGACAAGT ACCATGACTTATTGGTGTGAAATTTGTGAGGAAAGATTAAATCCAAAGGAGCGGTTTTAT AGTTGTGATGAGTATTGTTGTGTCACCATACACATTGAATGCTTGGTTGGGGTGGACTTC TACATGAAGCCCGGTTCAAAATGGTTCAACAAGTACGGTGCAGAGGTAAGTGTTCTGCCA AACAATCATCATATGTCTCGACCTTTTTGCTTTATTTGCAAGAAGCGTTGTCCACACAAA ACATTTTTCCAGTGCAATGGTTTTGAATATTGTTCCAGATCATGTTTACTTACTAAAAGT AAAGAGGTGATCTACCTTGGTGGCCATTAG

Peptide Sequence

PEP ID	AT3G50010.1
PEP Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr3:18537248-18539557 REVERSE LENGTH=769 \| 201606
Sequence	MDPDPDSESELLSLLTQLMFVEYFNLYWDATPLLTELILLVSSMDLDSQPKPESEFMSLT TQAISLFNSMDLESQSKLLSDLMSMVFQNLSLFNSALDSEATTLFGKIISLVSSMDLTTE EKPESDELVLLIQEILSLVNSRDSDSQPKRLVELISFISQKISLIDETLEVKPEPELISL THQILSLVVSMNSNSGEYISLCPQAQVKLENGRFRVLEDVSWRTNNKWHCLSVNWRTFKL SREEDTLHFICIGCNGDNHKEFNNVPVEINHPLHPNHSLQLVVLQEDSTRECYCCDEALS RILYYCSACDFAISILCARKPPVFLINHHRPEWHGHPLALFPRQAFLTCNLCALADPSSP IYMCPPCDFVTHLRCINLPRVIKISRHSHRIYFTSSFEKEGLSCGVCRRKINKLYGGYSC IKNGCWYAAHSRCATQKNVWDGVELEGVPEENEEEVDPPFATKGSGVIRHFTHRHLLRLD VDTGRDYDEDKLCNICITPIYFGNFYSCTPSCDYNLHETCANFPRKIDHPIHPHQLNLEA GYGDGEINEYECSVCPRKRTVGFLYRCRKCFYLHVQCAIASEPLDHPSHIHPLYLTSKPD EEQRKCSVCKKSGHCPTKETFNCIEECDFALCFECATLAQKVRYKHDKHVLTLSYGDKTS TMTYWCEICEERLNPKERFYSCDEYCCVTIHIECLVGVDFYMKPGSKWFNKYGAEVSVLP NNHHMSRPFCFICKKRCPHKTFFQCNGFEYCSRSCLLTKSKEVIYLGGH

Transcript Sequence

Transcript ID	AT3G50010.1
Transcript Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr3:18537058-18539648 REVERSE LENGTH=2591 \| 201606
Sequence	TGAAAGTTGCATAAGCCGACCTTACATTCATCCTCAAAAATCTCTCATATTAACAAAACT TTTACTCAAAGAGCCTCTCTCGGCAAACACTATGGATCCGGATCCGGATTCGGAGTCGGA GCTCTTATCACTCCTTACTCAACTAATGTTTGTCGAGTACTTTAACTTGTACTGGGATGC CACTCCATTGCTTACCGAACTAATCCTTCTAGTCAGCTCAATGGATTTGGATTCGCAGCC GAAGCCGGAGTCAGAGTTCATGTCACTCACTACTCAAGCAATATCTCTCTTCAACTCTAT GGATTTGGAGTCTCAGTCCAAACTGCTGTCGGATCTCATGTCAATGGTTTTTCAAAATTT ATCTCTCTTTAACTCTGCTTTGGACTCGGAAGCCACAACACTCTTTGGTAAAATAATCTC TCTGGTCAGCTCAATGGATTTGACTACAGAGGAGAAGCCAGAGTCTGATGAGCTAGTGTT ACTCATCCAAGAGATACTCTCTCTAGTCAACTCTAGGGATTCAGATTCCCAGCCAAAGCG GCTGGTGGAGCTAATATCATTCATTTCTCAAAAGATTTCTCTCATTGATGAAACTTTGGA AGTCAAACCGGAGCCGGAACTTATCTCACTCACTCATCAAATACTCTCCCTCGTCGTCTC TATGAACTCAAACTCGGGGGAGTATATTTCCTTGTGCCCTCAAGCACAAGTAAAACTGGA AAACGGAAGATTTCGTGTTCTTGAAGACGTCTCGTGGCGCACCAATAACAAGTGGCATTG CCTTTCTGTAAACTGGCGGACATTCAAGTTATCAAGAGAAGAAGACACTCTCCATTTTAT CTGCATAGGTTGCAATGGCGATAACCATAAAGAATTTAACAATGTTCCTGTTGAGATCAA CCATCCTCTTCATCCAAATCATTCTCTCCAGCTTGTCGTGTTGCAGGAAGATAGTACCAG GGAATGCTATTGTTGTGATGAAGCTCTTAGCCGTATACTTTATTATTGCTCGGCTTGCGA TTTTGCTATAAGTATACTTTGTGCGAGGAAACCACCAGTCTTTTTGATAAACCATCACCG TCCGGAGTGGCATGGTCATCCTCTTGCTCTGTTTCCAAGACAAGCTTTCTTAACTTGCAA CCTTTGCGCCTTGGCCGATCCAAGCTCTCCTATCTATATGTGTCCGCCTTGTGACTTTGT GACTCATCTAAGATGTATCAACTTACCACGTGTCATAAAGATATCTCGCCATAGCCATCG TATCTATTTTACTTCTTCGTTTGAGAAAGAAGGTTTGTCTTGTGGTGTTTGTCGCAGAAA GATCAACAAATTATACGGAGGCTATTCTTGTATCAAAAATGGTTGTTGGTATGCGGCACA TTCAAGATGTGCAACACAAAAAAATGTGTGGGATGGTGTAGAACTTGAGGGAGTGCCAGA AGAAAATGAGGAAGAAGTAGATCCACCGTTTGCAACGAAAGGAAGTGGAGTCATACGACA TTTCACTCATCGTCATCTTTTGAGACTTGATGTGGACACGGGAAGAGATTACGACGAGGA TAAGCTGTGTAACATATGCATTACGCCAATCTATTTTGGTAACTTCTACTCGTGTACGCC TAGCTGTGATTATAATCTCCACGAAACATGCGCAAATTTTCCTCGTAAAATAGATCATCC GATACATCCACATCAGCTTAATTTAGAGGCAGGATACGGTGATGGGGAGATCAATGAGTA TGAATGCTCGGTGTGTCCTAGGAAGCGTACTGTCGGTTTCCTCTATCGGTGCAGAAAATG TTTTTATCTACACGTGCAGTGTGCCATAGCTTCCGAGCCACTAGATCATCCAAGTCATAT ACATCCTTTATACCTCACATCCAAACCAGACGAAGAGCAAAGAAAATGTTCGGTTTGCAA GAAGTCAGGGCATTGTCCCACCAAGGAAACGTTCAATTGCATCGAGGAGTGCGACTTTGC TTTGTGTTTTGAGTGTGCTACTTTAGCTCAAAAGGTGAGGTATAAGCATGATAAGCATGT GCTCACTCTTTCTTATGGGGACAAGACAAGTACCATGACTTATTGGTGTGAAATTTGTGA GGAAAGATTAAATCCAAAGGAGCGGTTTTATAGTTGTGATGAGTATTGTTGTGTCACCAT ACACATTGAATGCTTGGTTGGGGTGGACTTCTACATGAAGCCCGGTTCAAAATGGTTCAA CAAGTACGGTGCAGAGGTAAGTGTTCTGCCAAACAATCATCATATGTCTCGACCTTTTTG CTTTATTTGCAAGAAGCGTTGTCCACACAAAACATTTTTCCAGTGCAATGGTTTTGAATA TTGTTCCAGATCATGTTTACTTACTAAAAGTAAAGAGGTGATCTACCTTGGTGGCCATTA GTCTTCCAAGTTATAAGAACTTTCATTTGTTGTATTGAAAGTAAAACACTGATATGTTTC GATATTGTTGTGATTTATCGTATTTTGCTTTGCATCTGTGTGATTTTTGAACGCTTGTTG TTTTTCATAATTTCATAACTACTGCTGGGGAACAATAAGTATAGATACAAGTTCAGTAAA ATATCAATTTG