Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G48900.2
CDS Infomation	\| single-stranded DNA endonuclease family protein \| Chr3:18131854-18136239 FORWARD LENGTH=1803 \| 201606
Sequence	ATGGGAGTGAAGTATCTTTGGGATGTCTTGGAGCCTTGTAAGAAGACTTTCCCACTCGAT CATCTTCAAAACAAAAGGGTATGCGTGGATCTTTCGTGTTGGATGGTGGAATTGCATAAA GTGAACAAATCTTATTGCGCCACTAAAGAAAAAGTTTATCTTCGAGGATTTTTTCATCGT CTCCGAGCCCTAATTGCCCTAAACTGCTCCATCATTTTAGTCTCAGATGGTGCAATTCCT GGAATCAAAGTACCAACTTACAAGCGTCGGTTAAAAGCAAGATTCGAGATCGCTGACGAT GGTGTTGAGCCTAGCAAAGAGACTTCACTCAAAAGAAATATGGGGTCTGAGTTCTCGTGC ATCATAAAAGAGGCGAAAGTTATTGCATCAACACTAGGGATACTTTGTTTAGACGGGATT GAGGAGGCTGAGGCGCAATGCGCTCTGCTAAACTCGGAATCCTTATGTGACGCCTGTTTT AGCTTTGATTCGGATATCTTCCTTTTTGGTGCAAAGACTGTATACAGAGAAATATGCCTT GGTGAAGGAGGTTATGTTGTTTGCTACGAGATGGATGACATCAAGAAAAAGCTTGGGCTT GGACGGAACTCATTGATAGCTCTAGCGCTTTTGCTTGGCAGTGACTACTCTCAGGGAGTT CGTGGTCTTCGACAGGAGAAAGCTTGTGAGCTTGTTAGGTCGATTGGAGACAATGTTATC CTTGAAAAAGTTGCATCAGAAGGACTTTCCTTTGCGGAAAAGCCGAGAAAGTCTAAGAAG CAAGTTAGGCCTTCTGTGTGCAGCAAAAAGGGGACCTTACCTTTGGTGGTTATAAATGGA AATAATCGTGATCCAGAAAGACTGGAAGAGATCAAGCAGGTGATCGATGCGTTCATGAAC CCCAAGTGCCACCAAGCAGACTCTAATACAGTTTCCAGGGCCTTAGCTGAATTCTCTTTC CAGCGCACCAAGCTTCAGGAGATATGCCATCAGTTCTTTGAGTGGCCCCCTGAGAAAACA GATGAATACATACTTCCTAAAGTTGCTGAAAGAAATCTGAGAAGGTTCGCTAATCTGCAA TCAAGATCAACTGAGGTTGAAGTTAACCTTCCTCTCCACAAGCCGCAGATGCCAGAGAAG TGTCCGGTGTCTGAAATCATAAAGACCCGAAAAGTACAGGGGCGAGAATGTTTTGAAGTC TCATGGAATGATCTAGAAGGGTTAGAGTCGTCCATTGTTCCTGCAGATCTTGTAGAAAGG GCTTGTCCTGAGAAGATCATAGAGTTCAAGGAGAAAATGGCAGCAAAAAAGAAGAAACCG AAGCCGAAACAAAAACAGAAGGAAACGAGTTCACCGACCAAATCTTCTTCTCTTGTCGAA CTCAGCCTCGAACTCCAACACCTTGATCTCAACTCAACCTCTCTAGTAAGTAGAAGCACC TTAGAAGAAGCAGAGCAAGAGAACGAACAACAAAACTCCAAGAAACATGATTACTTGCGT CTTATCGATTCACCTGATAGAGAAAATTGCAATAACGCTTGGTCAAACAGGGATAGATTG GGTGTTGGAATGAGTTCATTTCCATTGTATCCGGAAACAGAAGTCATTGATCTGATAAGC CCTTGTCCTGAAGCTCGTTCACGGAGCGTGTCAAGAAGTTATCAAGAACAGAAGAGCCAT GATCACCAACTTGAGACTGTGATTGAGCTGAGTGATTCAGAGACAGATGATGAGGAACAT TGCAAGAAAGCTAGAGAGCTTAGGATCTTTCTTCAAAATATCAGGAAAGACATTATCCTA TGA

Peptide Sequence

PEP ID	AT3G48900.2
PEP Infomation	\| single-stranded DNA endonuclease family protein \| Chr3:18131854-18136239 FORWARD LENGTH=600 \| 201606
Sequence	MGVKYLWDVLEPCKKTFPLDHLQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLRGFFHR LRALIALNCSIILVSDGAIPGIKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGSEFSC IIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYREICL GEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKACELVRSIGDNVI LEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLPLVVINGNNRDPERLEEIKQVIDAFMN PKCHQADSNTVSRALAEFSFQRTKLQEICHQFFEWPPEKTDEYILPKVAERNLRRFANLQ SRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVER ACPEKIIEFKEKMAAKKKKPKPKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRST LEEAEQENEQQNSKKHDYLRLIDSPDRENCNNAWSNRDRLGVGMSSFPLYPETEVIDLIS PCPEARSRSVSRSYQEQKSHDHQLETVIELSDSETDDEEHCKKARELRIFLQNIRKDIIL

Transcript Sequence

Transcript ID	AT3G48900.2
Transcript Infomation	\| single-stranded DNA endonuclease family protein \| Chr3:18131808-18136343 FORWARD LENGTH=1953 \| 201606
Sequence	TTTCTGTCTCTGTCTCTCTCTCTCGCTCGATCTCGAAGGTGAAGCTATGGGAGTGAAGTA TCTTTGGGATGTCTTGGAGCCTTGTAAGAAGACTTTCCCACTCGATCATCTTCAAAACAA AAGGGTATGCGTGGATCTTTCGTGTTGGATGGTGGAATTGCATAAAGTGAACAAATCTTA TTGCGCCACTAAAGAAAAAGTTTATCTTCGAGGATTTTTTCATCGTCTCCGAGCCCTAAT TGCCCTAAACTGCTCCATCATTTTAGTCTCAGATGGTGCAATTCCTGGAATCAAAGTACC AACTTACAAGCGTCGGTTAAAAGCAAGATTCGAGATCGCTGACGATGGTGTTGAGCCTAG CAAAGAGACTTCACTCAAAAGAAATATGGGGTCTGAGTTCTCGTGCATCATAAAAGAGGC GAAAGTTATTGCATCAACACTAGGGATACTTTGTTTAGACGGGATTGAGGAGGCTGAGGC GCAATGCGCTCTGCTAAACTCGGAATCCTTATGTGACGCCTGTTTTAGCTTTGATTCGGA TATCTTCCTTTTTGGTGCAAAGACTGTATACAGAGAAATATGCCTTGGTGAAGGAGGTTA TGTTGTTTGCTACGAGATGGATGACATCAAGAAAAAGCTTGGGCTTGGACGGAACTCATT GATAGCTCTAGCGCTTTTGCTTGGCAGTGACTACTCTCAGGGAGTTCGTGGTCTTCGACA GGAGAAAGCTTGTGAGCTTGTTAGGTCGATTGGAGACAATGTTATCCTTGAAAAAGTTGC ATCAGAAGGACTTTCCTTTGCGGAAAAGCCGAGAAAGTCTAAGAAGCAAGTTAGGCCTTC TGTGTGCAGCAAAAAGGGGACCTTACCTTTGGTGGTTATAAATGGAAATAATCGTGATCC AGAAAGACTGGAAGAGATCAAGCAGGTGATCGATGCGTTCATGAACCCCAAGTGCCACCA AGCAGACTCTAATACAGTTTCCAGGGCCTTAGCTGAATTCTCTTTCCAGCGCACCAAGCT TCAGGAGATATGCCATCAGTTCTTTGAGTGGCCCCCTGAGAAAACAGATGAATACATACT TCCTAAAGTTGCTGAAAGAAATCTGAGAAGGTTCGCTAATCTGCAATCAAGATCAACTGA GGTTGAAGTTAACCTTCCTCTCCACAAGCCGCAGATGCCAGAGAAGTGTCCGGTGTCTGA AATCATAAAGACCCGAAAAGTACAGGGGCGAGAATGTTTTGAAGTCTCATGGAATGATCT AGAAGGGTTAGAGTCGTCCATTGTTCCTGCAGATCTTGTAGAAAGGGCTTGTCCTGAGAA GATCATAGAGTTCAAGGAGAAAATGGCAGCAAAAAAGAAGAAACCGAAGCCGAAACAAAA ACAGAAGGAAACGAGTTCACCGACCAAATCTTCTTCTCTTGTCGAACTCAGCCTCGAACT CCAACACCTTGATCTCAACTCAACCTCTCTAGTAAGTAGAAGCACCTTAGAAGAAGCAGA GCAAGAGAACGAACAACAAAACTCCAAGAAACATGATTACTTGCGTCTTATCGATTCACC TGATAGAGAAAATTGCAATAACGCTTGGTCAAACAGGGATAGATTGGGTGTTGGAATGAG TTCATTTCCATTGTATCCGGAAACAGAAGTCATTGATCTGATAAGCCCTTGTCCTGAAGC TCGTTCACGGAGCGTGTCAAGAAGTTATCAAGAACAGAAGAGCCATGATCACCAACTTGA GACTGTGATTGAGCTGAGTGATTCAGAGACAGATGATGAGGAACATTGCAAGAAAGCTAG AGAGCTTAGGATCTTTCTTCAAAATATCAGGAAAGACATTATCCTATGATAACAAAAAAG GAAAAATAATGTTAATGAGTTCTTTTATCTTAATTTATGGATTTCATGAAAACTATTAAA AGTTTGAAGCTATATTTTTCTCTTTTGTTAATC