Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G48870.1
CDS Infomation	\| Clp ATPase \| Chr3:18122363-18126008 REVERSE LENGTH=2859 \| 201606
Sequence	ATGGCTTGGTCGATAGCTCTTCTTACACCTCCTTTTTTTGGTCCCGGAAGGCATGTGCAG GCCAAAGAATACAGGGAACCAAGAGGGTGTGTGATGAAGATGAGCAGTTTAAAAGCACCT GTTCTGAGAATTCAGGCCACAGAATACAGAGAACCAAGAGGGCGTGTGAAGATGATGTCC AGTTTACAAGCACCTCTTCTGACAATTCAGAGCTTCTCAGGGTTAAGGGCCCCCAGTGCA TTAGATTATTTGGGAAGGCCTAGTCCAGGTTTCCTTGTTAAGTATAAACTTGCAAAATCA TCTGGGAGAGAAAAAGCTAGCCGATGTGTACCCAAAGCAATGTTTGAGCGTTTTACCGAG AAAGCAATTAAGGTCATAATGCTGTCTCAAGAGGAAGCTCGGAGACTTGGCCATAACTTT GTTGGGACTGAGCAAATACTGTTGGGTCTAATTGGAGAAGGGACTGGGATTGCCGCCAAG GTTCTTAAATCCATGGGGATCAATCTTAAAGATTCACGCGTGGAAGTAGAAAAGATAATT GGGAGAGGCAGTGGATTCGTGGCAGTGGAGATTCCATTTACTCCTCGCGCAAAGCGGGTG CTGGAGTTGTCACTAGAGGAAGCTCGACAACTTGGGCATAACTACATTGGTTCAGAGCAC CTTTTGCTTGGTCTACTTCGTGAAGGGGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTG GGTGCAGATCCTAGTAATATACGGACACAGGTTATACGTATGGTCGGGGAAAACAATGAA GTCACAGCAAGCGTTGGTGGGGGAAGCAGCGGAAACAGCAAAATGCCAACACTTGAAGAG TATGGGACTAACTTAACTAAACTAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGG CAGCCACAGATCGAACGAGTGGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCATGT CTTATTGGAGAACCTGGAGTTGGTAAGACGGCAATAGCAGAAGGACTTGCACAGCGAATA GCTAGTGGTGATGTTCCTGAAACAATCGAGGGGAAGACGGTTATAACCCTTGATATGGGT CTTCTAGTGGCTGGAACGAAATACCGTGGAGAGTTCGAGGAAAGATTGAAGAAGCTTATG GAGGAAATCAGGCAAAGTGATGAGATAATTCTGTTTATTGATGAAGTGCACACGCTCATC GGTGCAGGAGCCGCTGAAGGTGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCA AGAGGTGAATTGCAGTGTATTGGTGCAACAACAATTGATGAGTACAGGAAACACATTGAG AAAGATCCTGCATTGGAGAGACGGTTCCAGCCTGTGAAAGTACCTGAACCAACTGTAGAA GAAGCTATACAGATTTTGCAAGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGA TACACTGATGAAGCCTTGGTTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGG TTTCTTCCCGACAAAGCGATTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGC CATGCTCAGCTTCCTGAGGAAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAA GAGAAGAATGAAGCTGTGCGAAGCCAAGACTTCGAGATGGCTGGTTCTCATCGTGACCGT GAAATAGAGCTCAAGGCTGAGATAGCTAATGTTTTATCTCGAGGCAAAGAAGTGGCCAAA GCCGAGAATGAAGCTGAGGAAGGAGGACCTACTGTCACAGAATCTGACATCCAACACATC GTCGCCACCTGGACAGGAATCCCGGTAGAGAAAGTCTCGTCTGATGAATCTAGCCGTCTT CTCCAAATGGAGCAGACCCTTCACACAAGAGTCATTGGCCAAGATGAAGCCGTTAAAGCA ATCAGTCGGGCTATCCGCCGTGCCCGTGTTGGGCTCAAAAACCCAAACCGTCCTATCGCC AGTTTCATCTTCTCTGGTCCAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCT GCTTACTACTTCGGTTCAGAAGAAGCAATGATCCGTCTTGACATGAGTGAGTTCATGGAA CGACACACTGTTTCGAAACTCATCGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGA GGTCAGTTAACAGAGGCGGTTCGACGCAGGCCCTACACTCTTGTTCTCTTTGACGAAATT GAGAAAGCACATCCCGATGTTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTA ACTGATAGCAAAGGAAGAACTGTCGATTTCAAGAACACGCTTCTGATCATGACTTCAAAC GTAGGGAGCAGCGTGATCGAAAAAGGTGGTAGAAGAATTGGGTTTGATCTTGACCACGAC GAGAAAGACAGCAGTTACAACAGAATCAAGAGCTTAGTGACTGAGGAACTAAAACAGTAT TTCAGACCAGAGTTCTTGAACAGGTTAGATGAGATGATTGTTTTCAGACAGTTAACAAAG CTGGAAGTCAAGGAGATTGCTGATATAATGCTTAAAGAAGTGGTGGCGAGACTTGAGGTC AAAGAGATTGAGCTTCAGGTGACTGAGAGGTTTAAAGAGAGAGTGGTGGATGAAGGATTC GACCCGAGTTATGGTGCGAGGCCACTTAGACGTGCAATAATGAGGCTTTTGGAGGATAGT ATGGCGGAGAAGATGCTTTCAAGGGACATTAAAGAAGGAGATTCTGTGATTGTTGATGTT GATGCCGAAGGAAGTGTGGTTGTGTTGAGTGGTACCACTGGACGTGTTGGTGGTTTTGCT GCTGAAGAAGCCATGGAAGATCCTATTCCAATATTGTAG

Peptide Sequence

PEP ID	AT3G48870.1
PEP Infomation	\| Clp ATPase \| Chr3:18122363-18126008 REVERSE LENGTH=952 \| 201606
Sequence	MAWSIALLTPPFFGPGRHVQAKEYREPRGCVMKMSSLKAPVLRIQATEYREPRGRVKMMS SLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTE KAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKII GRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENL GADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGR QPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMG LLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALA RGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLR YTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITK EKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHI VATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIA SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG GQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN VGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK LEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDS MAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL

Transcript Sequence

Transcript ID	AT3G48870.1
Transcript Infomation	\| Clp ATPase \| Chr3:18122142-18126718 REVERSE LENGTH=3293 \| 201606
Sequence	TAATCTAACGGCTGGTATGCAACTTTGGTAGGTGAGTGTGTTTAATCTATGAAGGGCGGC GATGCGAGAGAAGATAAAGAGAGAGAGAATAGAGAAATCTCTTGTCTCTTGGGTATCTTC TTCTTCACTTTCCTATCTCTTTCCCAATAAAAGGAGTCTCTCGCTTTCTCCAACTTCGCT ATCCAAAGGCGTCGACGCCTCCAACATTGCATCATGGCTTGGTCGATAGCTCTTCTTACA CCTCCTTTTTTTGGTCCCGGAAGGCATGTGCAGGCCAAAGAATACAGGGAACCAAGAGGG TGTGTGATGAAGATGAGCAGTTTAAAAGCACCTGTTCTGAGAATTCAGGCCACAGAATAC AGAGAACCAAGAGGGCGTGTGAAGATGATGTCCAGTTTACAAGCACCTCTTCTGACAATT CAGAGCTTCTCAGGGTTAAGGGCCCCCAGTGCATTAGATTATTTGGGAAGGCCTAGTCCA GGTTTCCTTGTTAAGTATAAACTTGCAAAATCATCTGGGAGAGAAAAAGCTAGCCGATGT GTACCCAAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAATGCTGTCT CAAGAGGAAGCTCGGAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACTGTTGGGT CTAATTGGAGAAGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGATCAATCTT AAAGATTCACGCGTGGAAGTAGAAAAGATAATTGGGAGAGGCAGTGGATTCGTGGCAGTG GAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGAAGCTCGA CAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTTGGTCTACTTCGTGAAGGG GAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATATACGGACA CAGGTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGGGGGAAGC AGCGGAAACAGCAAAATGCCAACACTTGAAGAGTATGGGACTAACTTAACTAAACTAGCA GAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGGTCCAG ATCTTGGCTCGAAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGAGTTGGTAAG ACGGCAATAGCAGAAGGACTTGCACAGCGAATAGCTAGTGGTGATGTTCCTGAAACAATC GAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAAATACCGT GGAGAGTTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGATGAGATA ATTCTGTTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGGTGCGATC GATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTATTGGTGCA ACAACAATTGATGAGTACAGGAAACACATTGAGAAAGATCCTGCATTGGAGAGACGGTTC CAGCCTGTGAAAGTACCTGAACCAACTGTAGAAGAAGCTATACAGATTTTGCAAGGTCTG CGTGAGCGCTATGAGATCCACCACAAACTTCGATACACTGATGAAGCCTTGGTTGCTGCT GCACAATTGTCACATCAGTACATCAGTGATCGGTTTCTTCCCGACAAAGCGATTGACTTG ATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGCTTCCTGAGGAAGCTAGA GAGCTTGAAAAGCAACTCAGGCAAATCACCAAAGAGAAGAATGAAGCTGTGCGAAGCCAA GACTTCGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAAGGCTGAGATAGCT AATGTTTTATCTCGAGGCAAAGAAGTGGCCAAAGCCGAGAATGAAGCTGAGGAAGGAGGA CCTACTGTCACAGAATCTGACATCCAACACATCGTCGCCACCTGGACAGGAATCCCGGTA GAGAAAGTCTCGTCTGATGAATCTAGCCGTCTTCTCCAAATGGAGCAGACCCTTCACACA AGAGTCATTGGCCAAGATGAAGCCGTTAAAGCAATCAGTCGGGCTATCCGCCGTGCCCGT GTTGGGCTCAAAAACCCAAACCGTCCTATCGCCAGTTTCATCTTCTCTGGTCCAACTGGT GTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCTTACTACTTCGGTTCAGAAGAAGCA ATGATCCGTCTTGACATGAGTGAGTTCATGGAACGACACACTGTTTCGAAACTCATCGGT TCACCTCCTGGTTACGTAGGATACACAGAAGGAGGTCAGTTAACAGAGGCGGTTCGACGC AGGCCCTACACTCTTGTTCTCTTTGACGAAATTGAGAAAGCACATCCCGATGTTTTCAAC ATGATGCTTCAGATCCTAGAAGACGGTAGACTAACTGATAGCAAAGGAAGAACTGTCGAT TTCAAGAACACGCTTCTGATCATGACTTCAAACGTAGGGAGCAGCGTGATCGAAAAAGGT GGTAGAAGAATTGGGTTTGATCTTGACCACGACGAGAAAGACAGCAGTTACAACAGAATC AAGAGCTTAGTGACTGAGGAACTAAAACAGTATTTCAGACCAGAGTTCTTGAACAGGTTA GATGAGATGATTGTTTTCAGACAGTTAACAAAGCTGGAAGTCAAGGAGATTGCTGATATA ATGCTTAAAGAAGTGGTGGCGAGACTTGAGGTCAAAGAGATTGAGCTTCAGGTGACTGAG AGGTTTAAAGAGAGAGTGGTGGATGAAGGATTCGACCCGAGTTATGGTGCGAGGCCACTT AGACGTGCAATAATGAGGCTTTTGGAGGATAGTATGGCGGAGAAGATGCTTTCAAGGGAC ATTAAAGAAGGAGATTCTGTGATTGTTGATGTTGATGCCGAAGGAAGTGTGGTTGTGTTG AGTGGTACCACTGGACGTGTTGGTGGTTTTGCTGCTGAAGAAGCCATGGAAGATCCTATT CCAATATTGTAGAAGGAAACAAGGGGTTTTCTAGTGATTTTCTTTTAAGTGTTATTGAAT TGACTATTGAGTCTCTTATGATTCGTATTTTGTACTCTAATCTCTTTGTTTCTGGATAAT GACTGTTCGGGAACCACAGAGAATTTCCCACAAAAAAAAAGAAAGCAGGATTTGGTTAGA ATTTCATCGAGTCATATAAGTGTCAAAATTGAGAATCTAATCACAGATTAACG