Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G48860.2
CDS Infomation	\| coiled-coil protein \| Chr3:18117619-18121853 FORWARD LENGTH=1734 \| 201606
Sequence	ATGGATCGGAGGAGGGCGGGTAGCCCAGTGTATGGTCGCCAGTGGAGCGAATCATCGAAC AGTACGGAGGCAACATCACCGGCGATGTCTCCTGCTCACCGGAAACAGCTCGGTGGTATC GGAGGTTTCTCCACCGTTAAACGGACTCAGAACGTAGCTGCCAAAGCCGCGGCACAGCGA TTAGCTAAGGTCATGGCCTTACAGAACAAAGACAACGGAGACGAAGATGATGAAGATGAA GATGAAGATCTAAGTCTCAGATTCGCATCTGCTTCTTTAAAACCTGCTCGTCATGCACCT TCTTCTATCTCCTCCACCGGAAGCAATAGCAGCAACGGAAATAATAATTTGCCGGCTGTT TCATTTGCTCCCCGAACTAGATCGCCGTCTCCTGCGTTAGGCAGGAACTTCGCCGAGCAA GTACCTTCTTCAGTGCGGTCTGCTTCAGCCGGAAGGCCGTCAATGTCTGCTAGATCTACG ACTCCGACTCCGATTCCTAATCTAATGCCGCCTAGTAGGGTGTCGGTGAAAACTCCGGTT TCTATTCCTCCACTTGATCCTCCAACTCGGAGCAGAGATAAAAGGTTCTTTGCTGATGTA CCATCAGTAAATTCAAAAGAAAAGGGTGATCAGCGGGAAGCTTCAGCTCTTCGTGATGAA CTGGATATGCTACAAGAGGAGAATGAGAATGTACTGGAGAAGCTTCGTCGTGCGGAAGAA AAAAGGGTGGAAGCAGAAGCTAGGGCTAAGGAGCTCGAGAAACAGGTTGCCTCTCTTGGA GAAGGAGTTTCCTTGGAGGCGAAATTGTTAAGCAGGAAAGAAGCAGCATTGCGTCAAAGA GAGGCTGCTCTAAATGTTGCTAAACAAAAAAAGAGTGGAAAGGATGAGGAAATTGTTTCC CTACGTTCGGAGCTTGAGAACTTGAAAGATGAGGCTACAACTGCTGCAGAACGGCTTCAA GAAGCAGAGTCTGAAGCGAAGTCTCTTCGCACAATGACTCAGAGGATGATTTTAACACAG GATGAAATGGAAGAAGTAGTTCTGAAGAGATGCTGGCTTGCTCGGTATTGGGGCTTGGCT GTGCAACATGGCATTTGTGCGGATATAGCACCATCCAGGCAAGAGCACTGGTCAAAGTTG GCTCCTCTTCCATTTGAGCTCGTCACTTCAGCAGCACAGAAGGCGAAGGAGTTATCTTGG GATAAAGGTGGGAATGATCGGAGTAAGGCGGCTAGAGATTTGAGTGATCTAACTGGAGAA GGAAATATTGAAAGTATGCTTTCAGTTGAGATGGGTTTGAGAGAGCTAGCATCATTAAAG GTGGAGGATGCTGTTGTGCTTATATTCGCCCAGCAGAGAAAGTTGAGTTTGGTTCGCCAC ACTGTTTCCGACTCCAAAGGTCATGGAGAATCCAGATTTATCGATGCATATGAACTGGGT GAAGCGGAACAAGAAGATGTTGCCTTTAAGCAGGCATGGCTGATGTACTTCTGGGGAAGA GCTAAGTTGCACGGTGTGGAAGATGACATCGCAGAGGAACGTGTCCAGTTATGGATCAGC CGTAGCAGTGGGAAATCTCAGACGACTTCTCATGATGCCTTGGATGTGGAAAGAGGGTTG ATAGAGCTACGAAAACTGGGAATAGAGCAACAGTTGTGGGAAGCTTCTCGACGAGAAATC GATCAGCTTCCCTCGCCTACTTCTTCGAATCACGATCTCGATGCTGATTCATAG

Peptide Sequence

PEP ID	AT3G48860.2
PEP Infomation	\| coiled-coil protein \| Chr3:18117619-18121853 FORWARD LENGTH=577 \| 201606
Sequence	MDRRRAGSPVYGRQWSESSNSTEATSPAMSPAHRKQLGGIGGFSTVKRTQNVAAKAAAQR LAKVMALQNKDNGDEDDEDEDEDLSLRFASASLKPARHAPSSISSTGSNSSNGNNNLPAV SFAPRTRSPSPALGRNFAEQVPSSVRSASAGRPSMSARSTTPTPIPNLMPPSRVSVKTPV SIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENENVLEKLRRAEE KRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEEIVS LRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLA VQHGICADIAPSRQEHWSKLAPLPFELVTSAAQKAKELSWDKGGNDRSKAARDLSDLTGE GNIESMLSVEMGLRELASLKVEDAVVLIFAQQRKLSLVRHTVSDSKGHGESRFIDAYELG EAEQEDVAFKQAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTTSHDALDVERGL IELRKLGIEQQLWEASRREIDQLPSPTSSNHDLDADS

Transcript Sequence

Transcript ID	AT3G48860.2
Transcript Infomation	\| coiled-coil protein \| Chr3:18117343-18122812 FORWARD LENGTH=2969 \| 201606
Sequence	GATTAAAGATTTTGTTAACTATAATCTTATCATTAATCACTTACCTTTGAAAGCTCGCAT GTGTTTCTCTTCTCCGTGTTAAACGCTGTCGTTTTTGGCGTCACTGTTATTTCAACACTT TTCTCCAATCTCACCGAACGTTTATTTTCCCTTCCGTTTTCTCGAGAAAATCTACCTTTT TCCCCGAGAAATTTCATTTTCTCTGGTTCACCTGCTTGTTGCTCGCTTAAATACAGCGAT TTCATCCAACCAACAAGTACCTTCACCAACACACTGATGGATCGGAGGAGGGCGGGTAGC CCAGTGTATGGTCGCCAGTGGAGCGAATCATCGAACAGTACGGAGGCAACATCACCGGCG ATGTCTCCTGCTCACCGGAAACAGCTCGGTGGTATCGGAGGTTTCTCCACCGTTAAACGG ACTCAGAACGTAGCTGCCAAAGCCGCGGCACAGCGATTAGCTAAGGTCATGGCCTTACAG AACAAAGACAACGGAGACGAAGATGATGAAGATGAAGATGAAGATCTAAGTCTCAGATTC GCATCTGCTTCTTTAAAACCTGCTCGTCATGCACCTTCTTCTATCTCCTCCACCGGAAGC AATAGCAGCAACGGAAATAATAATTTGCCGGCTGTTTCATTTGCTCCCCGAACTAGATCG CCGTCTCCTGCGTTAGGCAGGAACTTCGCCGAGCAAGTACCTTCTTCAGTGCGGTCTGCT TCAGCCGGAAGGCCGTCAATGTCTGCTAGATCTACGACTCCGACTCCGATTCCTAATCTA ATGCCGCCTAGTAGGGTGTCGGTGAAAACTCCGGTTTCTATTCCTCCACTTGATCCTCCA ACTCGGAGCAGAGATAAAAGGTTCTTTGCTGATGTACCATCAGTAAATTCAAAAGAAAAG GGTGATCAGCGGGAAGCTTCAGCTCTTCGTGATGAACTGGATATGCTACAAGAGGAGAAT GAGAATGTACTGGAGAAGCTTCGTCGTGCGGAAGAAAAAAGGGTGGAAGCAGAAGCTAGG GCTAAGGAGCTCGAGAAACAGGTTGCCTCTCTTGGAGAAGGAGTTTCCTTGGAGGCGAAA TTGTTAAGCAGGAAAGAAGCAGCATTGCGTCAAAGAGAGGCTGCTCTAAATGTTGCTAAA CAAAAAAAGAGTGGAAAGGATGAGGAAATTGTTTCCCTACGTTCGGAGCTTGAGAACTTG AAAGATGAGGCTACAACTGCTGCAGAACGGCTTCAAGAAGCAGAGTCTGAAGCGAAGTCT CTTCGCACAATGACTCAGAGGATGATTTTAACACAGGATGAAATGGAAGAAGTAGTTCTG AAGAGATGCTGGCTTGCTCGGTATTGGGGCTTGGCTGTGCAACATGGCATTTGTGCGGAT ATAGCACCATCCAGGCAAGAGCACTGGTCAAAGTTGGCTCCTCTTCCATTTGAGCTCGTC ACTTCAGCAGCACAGAAGGCGAAGGAGTTATCTTGGGATAAAGGTGGGAATGATCGGAGT AAGGCGGCTAGAGATTTGAGTGATCTAACTGGAGAAGGAAATATTGAAAGTATGCTTTCA GTTGAGATGGGTTTGAGAGAGCTAGCATCATTAAAGGTGGAGGATGCTGTTGTGCTTATA TTCGCCCAGCAGAGAAAGTTGAGTTTGGTTCGCCACACTGTTTCCGACTCCAAAGGTCAT GGAGAATCCAGATTTATCGATGCATATGAACTGGGTGAAGCGGAACAAGAAGATGTTGCC TTTAAGCAGGCATGGCTGATGTACTTCTGGGGAAGAGCTAAGTTGCACGGTGTGGAAGAT GACATCGCAGAGGAACGTGTCCAGTTATGGATCAGCCGTAGCAGTGGGAAATCTCAGACG ACTTCTCATGATGCCTTGGATGTGGAAAGAGGGTTGATAGAGCTACGAAAACTGGGAATA GAGCAACAGTTGTGGGAAGCTTCTCGACGAGAAATCGATCAGCTTCCCTCGCCTACTTCT TCGAATCACGATCTCGATGCTGATTCATAGTAAAGTCTCTTCCTTTTCTTTGATAGAAGA AATTTTCGTTTTGTATATCTCTCGTCATGTAAGTTTCACGAAGAATCTGTTGTGTCATTG TATTTTTTATGTTTTCCCTTTTCACACTTAAGTGTGTAAGCTTTTGGTATTCTTATTTTT GCAATCAATTCCAAAAAGTTTTGGAGGACGATACTGGGTAAAAAATAGGATATCGAAAAC ACTGATCACGAAAAATTCATGTTACCCTTACTGTTTTTATAAACCATGTTTTGAGGATGG GATAGAAGAATTGAACCTCGTTAATCTGTGATTAGATTCTCAATTTTGACACTTATATGA CTCGATGAAATTCTAACCAAATCCTGCTTTCTTTTTTTTTGTGGGAAATTCTCTGTGGTT CCCGAACAGTCATTATCCAGAAACAAAGAGATTAGAGTACAAAATACGAATCATAAGAGA CTCAATAGTCAATTCAATAACACTTAAAAGAAAATCACTAGAAAACCCCTTGTTTCCTTC TACAATATTGGAATAGGATCTTCCATGGCTTCTTCAGCAGCAAAACCACCAACACGTCCA GTGGTACCACTCAACACAACCACACTTCCTTCGGCATCAACATCAACAATCACAGAATCT CCTTCTTTAATGTCCCTTGAAAGCATCTTCTCCGCCATACTATCCTCCAAAAGCCTCATT ATTGCACGTCTAAGTGGCCTCGCACCATAACTCGGGTCGAATCCTTCATCCACCACTCTC TCTTTAAACCTCTCAGTCACCTGAAGCTCAATCTCTTTGACCTCAAGTCTCGCCACCACT TCTTTAAGCATTATATCAGCAATCTCCTTGACTTCCAGCTTTGTTAACTGTCTGAAAACA ATCATCTCATCTAACCTGTTCAAGAACTCTGGTCTGAAATACTGTTTTAGTTCCTCAGTC ACTAAGCTCTTGATTCTGTTGTAACTGCT