Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G48810.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:18097048-18099027 FORWARD LENGTH=1980 \| 201606
Sequence	ATGTACTTGAAAGAAGGATGTTCGTTGCTATTGAAAGTTCAAAAACCCTTAATCCCATTT GTCCTCAATACAAATCTCAATGTGAATCATCTCCTCACAGAATCTCCAAACCATGCGGAG ATCAAAGAATTAGATGTGGTAAAGAGGCTGAGACAAGAGTCATGTGTTCCATTAGCTTTG CATTTCTTCAAATCCATTGCAAATTCTAATCTTTTCAAGCACACGCCTTTAACATTCGAG GTAATGATTAGAAAGCTTGCAATGGATGGTCAGGTTGATAGTGTTCAGTATCTTTTGCAG CAAATGAAACTTCAAGGTTTTCATTGTTCTGAAGATTTGTTTATCAGTGTTATTAGTGTA TATAGGCAAGTGGGTTTAGCTGAAAGAGCTGTGGAGATGTTTTATAGGATTAAGGAGTTT GGGTGTGATCCTTCTGTGAAGATATATAATCATGTTTTGGATACTTTACTTGGTGAGAAT AGGATTCAGATGATTTATATGGTTTATAGAGATATGAAGAGAGATGGGTTTGAGCCTAAT GTGTTTACGTATAATGTTCTTCTTAAGGCGTTGTGTAAGAATAATAAGGTAGATGGTGCG AAGAAGCTGCTCGTTGAGATGTCGAATAAAGGGTGTTGTCCTGATGCTGTGAGTTATACT ACGGTGATCTCGTCGATGTGTGAGGTTGGTTTGGTTAAGGAAGGTAGAGAACTCGCGGAA AGATTTGAACCTGTTGTGAGTGTTTATAATGCTTTGATTAATGGGTTATGCAAAGAGCAT GATTACAAAGGGGCGTTTGAACTGATGAGAGAAATGGTGGAGAAGGGGATATCTCCTAAT GTTATCTCGTACTCTACACTTATCAATGTGCTTTGTAATTCTGGTCAGATTGAGCTTGCT TTCTCGTTTCTGACGCAGATGTTGAAACGAGGGTGTCATCCAAATATTTATACATTGAGT TCTCTTGTGAAGGGTTGTTTTCTAAGAGGTACGACCTTCGATGCTCTAGACTTGTGGAAC CAGATGATCAGAGGATTTGGGTTACAGCCGAACGTTGTAGCGTATAATACTTTGGTACAA GGGTTTTGTTCCCATGGGAATATAGTCAAGGCTGTGTCTGTCTTTTCACACATGGAAGAA ATCGGATGTTCTCCAAACATCAGAACCTATGGCTCACTTATCAACGGTTTTGCCAAAAGA GGTAGCCTGGATGGCGCAGTTTATATATGGAACAAGATGCTGACTAGTGGATGTTGCCCA AATGTTGTAGTCTATACGAACATGGTGGAAGCTCTTTGTAGGCACTCCAAGTTTAAAGAA GCTGAATCTCTTATAGAGATTATGTCCAAAGAAAACTGTGCTCCTTCTGTGCCAACGTTT AACGCATTTATCAAAGGTTTATGCGATGCAGGGAGGCTTGACTGGGCTGAGAAAGTGTTC AGACAAATGGAGCAGCAACACAGATGCCCTCCCAACATTGTAACATACAACGAGTTACTG GATGGGCTCGCAAAGGCAAACCGAATAGAAGAAGCTTATGGTCTAACCCGAGAGATCTTC ATGAGAGGTGTGGAGTGGAGCTCATCGACTTACAACACGCTTTTACATGGATCATGCAAT GCAGGTCTCCCGGGGATAGCTCTGCAGCTAGTAGGAAAAATGATGGTCGATGGTAAATCT CCGGATGAGATAACTATGAATATGATAATATTAGCATATTGCAAACAAGGCAAAGCTGAG AGGGCAGCCCAGATGTTGGATCTAGTTTCATGTGGAAGAAGAAAGTGGCGGCCTGATGTA ATCTCTTACACAAACGTGATTTGGGGTCTATGCAGATCTAATTGTAGGGAGGATGGAGTG ATTCTTCTTGAGAGGATGATAAGTGCAGGGATCGTCCCAAGTATTGCTACATGGAGTGTA TTGATTAATTGTTTTATTCTCGATGACATCGTGAGAGCCCATGATCAGTTTACCATATAG

Peptide Sequence

PEP ID	AT3G48810.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:18097048-18099027 FORWARD LENGTH=659 \| 201606
Sequence	MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLAL HFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISV YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPN VFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQFTI

Transcript Sequence

Transcript ID	AT3G48810.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:18097010-18099721 FORWARD LENGTH=2552 \| 201606
Sequence	TTCAGAACCCTAGCTTTGGCAGAAGATTGTTCGTTGTCATGTACTTGAAAGAAGGATGTT CGTTGCTATTGAAAGTTCAAAAACCCTTAATCCCATTTGTCCTCAATACAAATCTCAATG TGAATCATCTCCTCACAGAATCTCCAAACCATGCGGAGATCAAAGAATTAGATGTGGTAA AGAGGCTGAGACAAGAGTCATGTGTTCCATTAGCTTTGCATTTCTTCAAATCCATTGCAA ATTCTAATCTTTTCAAGCACACGCCTTTAACATTCGAGGTAATGATTAGAAAGCTTGCAA TGGATGGTCAGGTTGATAGTGTTCAGTATCTTTTGCAGCAAATGAAACTTCAAGGTTTTC ATTGTTCTGAAGATTTGTTTATCAGTGTTATTAGTGTATATAGGCAAGTGGGTTTAGCTG AAAGAGCTGTGGAGATGTTTTATAGGATTAAGGAGTTTGGGTGTGATCCTTCTGTGAAGA TATATAATCATGTTTTGGATACTTTACTTGGTGAGAATAGGATTCAGATGATTTATATGG TTTATAGAGATATGAAGAGAGATGGGTTTGAGCCTAATGTGTTTACGTATAATGTTCTTC TTAAGGCGTTGTGTAAGAATAATAAGGTAGATGGTGCGAAGAAGCTGCTCGTTGAGATGT CGAATAAAGGGTGTTGTCCTGATGCTGTGAGTTATACTACGGTGATCTCGTCGATGTGTG AGGTTGGTTTGGTTAAGGAAGGTAGAGAACTCGCGGAAAGATTTGAACCTGTTGTGAGTG TTTATAATGCTTTGATTAATGGGTTATGCAAAGAGCATGATTACAAAGGGGCGTTTGAAC TGATGAGAGAAATGGTGGAGAAGGGGATATCTCCTAATGTTATCTCGTACTCTACACTTA TCAATGTGCTTTGTAATTCTGGTCAGATTGAGCTTGCTTTCTCGTTTCTGACGCAGATGT TGAAACGAGGGTGTCATCCAAATATTTATACATTGAGTTCTCTTGTGAAGGGTTGTTTTC TAAGAGGTACGACCTTCGATGCTCTAGACTTGTGGAACCAGATGATCAGAGGATTTGGGT TACAGCCGAACGTTGTAGCGTATAATACTTTGGTACAAGGGTTTTGTTCCCATGGGAATA TAGTCAAGGCTGTGTCTGTCTTTTCACACATGGAAGAAATCGGATGTTCTCCAAACATCA GAACCTATGGCTCACTTATCAACGGTTTTGCCAAAAGAGGTAGCCTGGATGGCGCAGTTT ATATATGGAACAAGATGCTGACTAGTGGATGTTGCCCAAATGTTGTAGTCTATACGAACA TGGTGGAAGCTCTTTGTAGGCACTCCAAGTTTAAAGAAGCTGAATCTCTTATAGAGATTA TGTCCAAAGAAAACTGTGCTCCTTCTGTGCCAACGTTTAACGCATTTATCAAAGGTTTAT GCGATGCAGGGAGGCTTGACTGGGCTGAGAAAGTGTTCAGACAAATGGAGCAGCAACACA GATGCCCTCCCAACATTGTAACATACAACGAGTTACTGGATGGGCTCGCAAAGGCAAACC GAATAGAAGAAGCTTATGGTCTAACCCGAGAGATCTTCATGAGAGGTGTGGAGTGGAGCT CATCGACTTACAACACGCTTTTACATGGATCATGCAATGCAGGTCTCCCGGGGATAGCTC TGCAGCTAGTAGGAAAAATGATGGTCGATGGTAAATCTCCGGATGAGATAACTATGAATA TGATAATATTAGCATATTGCAAACAAGGCAAAGCTGAGAGGGCAGCCCAGATGTTGGATC TAGTTTCATGTGGAAGAAGAAAGTGGCGGCCTGATGTAATCTCTTACACAAACGTGATTT GGGGTCTATGCAGATCTAATTGTAGGGAGGATGGAGTGATTCTTCTTGAGAGGATGATAA GTGCAGGGATCGTCCCAAGTATTGCTACATGGAGTGTATTGATTAATTGTTTTATTCTCG ATGACATCGTGAGAGCCCATGATCAGTTTACCATATAGCAAATCAGACTTGTTCAATTTT GCTGTGAATCCATTTGCTTCTCTGTATGAATAGAAGAAGGATCAACTCCGGTGAATATAC AGAAATTTTGTGAACAGATGGAAGCTTGGCTTGTGGGTCTTCTTCACTGGAGCCTTCTAG AACTCAAAGAAAACATTTTAATCCTTGCAAGAAAAATCAGACGACTGGATTTGGTACCTG ACAATACATTGCTGAGATATTGACTGATGGTTGTAGACTAGAATCGTTGGACCTTTTTCT ACAAGAATCTGCTGAAGCTGCTCTGATAACTATTCGGTTCCTAACGATGTTCTCTGGCCA AGGTTGGAGTTTATTATATTCATTTGTGTATTGAAGCACTAGATGATATTTGGAATTAAA GGTTTGGCCTCTAAAAGTTCTAACTGATCCAAGCTTCTAACGAACATATAGGAGGGGAAT TTCGAGCCGCTGAGAGATGAAACATCCTGCTTCAGCTACCTTTCTGTTTCAAAAAGATCC TTCAGCTCGTAGAAAGTAGAAACAAAGAGAGG