Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G48010.1
CDS Infomation	\| cyclic nucleotide-gated channel 16 \| Chr3:17721335-17724028 REVERSE LENGTH=2118 \| 201606
Sequence	ATGAGCAACCTCCACCTCTACACCTCCGCACGGTTTCGCAATTTCCCGACAACATTCTCC CTCCGTCACCACCACAACGACCCCAACAACCAACGCCGTCGATCCATCTTCTCCAAGCTC CGTGACAAAACTCTCGACCCTGGCGGTGACCTAATCACGAGATGGAACCACATTTTCCTC ATCACATGCCTCCTCGCTCTCTTCCTCGATCCTCTCTACTTCTATCTCCCCATTGTCCAA GCCGGAACCGCATGTATGTCCATCGACGTCCGTTTCGGCATTTTCGTCACATGCTTCCGA AACCTAGCCGATCTCTCCTTCCTCATCCACATTCTCCTCAAATTCAAAACCGCTTTTGTA TCCAAATCCTCTAGAGTCTTTGGTCGTGGAGAGCTTGTTATGGACCGCCGTGAAATCGCT ATCCGTTACCTCAAATCTGAGTTCGTCATCGACCTAGCCGCCACCCTTCCTCTTCCTCAG ATAATGATTTGGTTTGTGATACCAAATGCTGGAGAATTCAGATACGCAGCTCACCAGAAC CACACACTTTCATTGATCGTCCTTATACAATATGTGCCTCGCTTCCTCGTCATGCTTCCT CTCAACCGTCGAATCATTAAAGCCACCGGAGTCGCAGCCAAAACAGCCTGGTCCGGTGCA GCCTACAATCTCATCCTTTACTTACTTGTGAGCCACGTTCTTGGATCGGTTTGGTACGTT TTATCGATCCAGAGACAGCACGAATGCTGGAGAAGAGAGTGCATTAAAGAGATGAACGCA ACGCATTCACCTTCTTGTAGTCTCTTGTTTCTAGACTGTGGATCGTTGCATGATCCAGGT AGACAAGCTTGGATGCGGATCACTCGGGTTCTGTCAAATTGTGATGCACGCAATGACGAT GACCAACATTTTCAGTTTGGTATGTTCGGTGATGCGTTCACTAATGATGTCACTTCCTCT CCTTTCTTTGATAAATACTTCTACTGCCTTTGGTGGGGTCTCCGTAACCTCAGTTCCTAT GGACAGAGTCTTGCAGCGAGTACACTGAGCAGTGAGACTATATTCAGTTGTTTCATTTGT GTCGCGGGTCTTGTTTTCTTCTCTCATCTCATTGGAAATGTTCAGAACTATCTGCAATCG ACGACTGCTAGGTTAGACGAATGGAGAGTTCGAAGAAGAGACACAGAGGAATGGATGCGA CATAGGCAATTGCCAGATGAGTTACAAGAGCGTGTAAGGCGATTCGTCCAATATAAATGG CTAACGACTCGTGGAGTCGACGAAGAAGCCATTCTACGGGCTCTACCATTGGATCTTCGT CGCCAGATCCAACGACATCTCTGTCTTGCCCTCGTTCGCCGTGTGCCGTTCTTTGCGCAG ATGGATGACCAGCTCTTGGATGCGATATGTGAGCGTCTAGTTCCGTCCTTGAACACAAAA GACACCTATGTTATACGCGAAGGCGATCCTGTAAACGAGATGCTTTTCATTATTAGAGGT CAGATGGAGAGTTCAACTACAGATGGTGGACGGTCAGGATTCTTTAACTCTATCACACTT AGACCAGGAGATTTCTGCGGTGAAGAGCTTTTAACCTGGGCTTTAGTGCCAAACATTAAT CATAATCTACCATTGTCCACGAGAACCGTAAGGACTCTCTCCGAAGTAGAAGCTTTCGCT CTCCGAGCAGAGGACTTGAAATTCGTAGCTAACCAATTCAGACGTCTTCACAGCAAGAAA CTCCAACATGCTTTCAGATACTATTCGCATCAATGGAGAGCATGGGGAACTTGTTTTATA CAAGCTGCTTGGAGGCGATACATGAAGAGGAAATTAGCAATGGAGTTAGCTAGGCAAGAG GAAGAAGACGATTACTTCTATGACGATGATGGAGACTATCAATTCGAAGAGGACATGCCT GAAAGTAATAATAACAACGGAGACGAAAACAGCAGCAATAATCAAAATTTGAGTGCAACA ATATTAGCGTCTAAGTTCGCAGCTAATACTAAGAGAGGTGTTTTAGGGAACCAAAGAGGA TCTACAAGAATTGATCCTGATCATCCAACTTTGAAGATGCCTAAAATGTTTAAACCAGAG GATCCAGGATTCTTCTGA

Peptide Sequence

PEP ID	AT3G48010.1
PEP Infomation	\| cyclic nucleotide-gated channel 16 \| Chr3:17721335-17724028 REVERSE LENGTH=705 \| 201606
Sequence	MSNLHLYTSARFRNFPTTFSLRHHHNDPNNQRRRSIFSKLRDKTLDPGGDLITRWNHIFL ITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFV SKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQN HTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYV LSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLSNCDARNDD DQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFIC VAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKW LTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTK DTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNIN HNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFI QAAWRRYMKRKLAMELARQEEEDDYFYDDDGDYQFEEDMPESNNNNGDENSSNNQNLSAT ILASKFAANTKRGVLGNQRGSTRIDPDHPTLKMPKMFKPEDPGFF

Transcript Sequence

Transcript ID	AT3G48010.1
Transcript Infomation	\| cyclic nucleotide-gated channel 16 \| Chr3:17721137-17724140 REVERSE LENGTH=2428 \| 201606
Sequence	ATTTTTCATAGACACAGGCTCTCTCCTCTCCTTAATTGTCTCCAATATGGTCTCATTCTT CTACTCCCACAAATCTCTCCCTTCCATAACTTGAAACACACGCAACCCCCAAATGAGCAA CCTCCACCTCTACACCTCCGCACGGTTTCGCAATTTCCCGACAACATTCTCCCTCCGTCA CCACCACAACGACCCCAACAACCAACGCCGTCGATCCATCTTCTCCAAGCTCCGTGACAA AACTCTCGACCCTGGCGGTGACCTAATCACGAGATGGAACCACATTTTCCTCATCACATG CCTCCTCGCTCTCTTCCTCGATCCTCTCTACTTCTATCTCCCCATTGTCCAAGCCGGAAC CGCATGTATGTCCATCGACGTCCGTTTCGGCATTTTCGTCACATGCTTCCGAAACCTAGC CGATCTCTCCTTCCTCATCCACATTCTCCTCAAATTCAAAACCGCTTTTGTATCCAAATC CTCTAGAGTCTTTGGTCGTGGAGAGCTTGTTATGGACCGCCGTGAAATCGCTATCCGTTA CCTCAAATCTGAGTTCGTCATCGACCTAGCCGCCACCCTTCCTCTTCCTCAGATAATGAT TTGGTTTGTGATACCAAATGCTGGAGAATTCAGATACGCAGCTCACCAGAACCACACACT TTCATTGATCGTCCTTATACAATATGTGCCTCGCTTCCTCGTCATGCTTCCTCTCAACCG TCGAATCATTAAAGCCACCGGAGTCGCAGCCAAAACAGCCTGGTCCGGTGCAGCCTACAA TCTCATCCTTTACTTACTTGTGAGCCACGTTCTTGGATCGGTTTGGTACGTTTTATCGAT CCAGAGACAGCACGAATGCTGGAGAAGAGAGTGCATTAAAGAGATGAACGCAACGCATTC ACCTTCTTGTAGTCTCTTGTTTCTAGACTGTGGATCGTTGCATGATCCAGGTAGACAAGC TTGGATGCGGATCACTCGGGTTCTGTCAAATTGTGATGCACGCAATGACGATGACCAACA TTTTCAGTTTGGTATGTTCGGTGATGCGTTCACTAATGATGTCACTTCCTCTCCTTTCTT TGATAAATACTTCTACTGCCTTTGGTGGGGTCTCCGTAACCTCAGTTCCTATGGACAGAG TCTTGCAGCGAGTACACTGAGCAGTGAGACTATATTCAGTTGTTTCATTTGTGTCGCGGG TCTTGTTTTCTTCTCTCATCTCATTGGAAATGTTCAGAACTATCTGCAATCGACGACTGC TAGGTTAGACGAATGGAGAGTTCGAAGAAGAGACACAGAGGAATGGATGCGACATAGGCA ATTGCCAGATGAGTTACAAGAGCGTGTAAGGCGATTCGTCCAATATAAATGGCTAACGAC TCGTGGAGTCGACGAAGAAGCCATTCTACGGGCTCTACCATTGGATCTTCGTCGCCAGAT CCAACGACATCTCTGTCTTGCCCTCGTTCGCCGTGTGCCGTTCTTTGCGCAGATGGATGA CCAGCTCTTGGATGCGATATGTGAGCGTCTAGTTCCGTCCTTGAACACAAAAGACACCTA TGTTATACGCGAAGGCGATCCTGTAAACGAGATGCTTTTCATTATTAGAGGTCAGATGGA GAGTTCAACTACAGATGGTGGACGGTCAGGATTCTTTAACTCTATCACACTTAGACCAGG AGATTTCTGCGGTGAAGAGCTTTTAACCTGGGCTTTAGTGCCAAACATTAATCATAATCT ACCATTGTCCACGAGAACCGTAAGGACTCTCTCCGAAGTAGAAGCTTTCGCTCTCCGAGC AGAGGACTTGAAATTCGTAGCTAACCAATTCAGACGTCTTCACAGCAAGAAACTCCAACA TGCTTTCAGATACTATTCGCATCAATGGAGAGCATGGGGAACTTGTTTTATACAAGCTGC TTGGAGGCGATACATGAAGAGGAAATTAGCAATGGAGTTAGCTAGGCAAGAGGAAGAAGA CGATTACTTCTATGACGATGATGGAGACTATCAATTCGAAGAGGACATGCCTGAAAGTAA TAATAACAACGGAGACGAAAACAGCAGCAATAATCAAAATTTGAGTGCAACAATATTAGC GTCTAAGTTCGCAGCTAATACTAAGAGAGGTGTTTTAGGGAACCAAAGAGGATCTACAAG AATTGATCCTGATCATCCAACTTTGAAGATGCCTAAAATGTTTAAACCAGAGGATCCAGG ATTCTTCTGATAGTTGTTGTGACAAATGCATTTAGGATTTCTGACACTAACTTGATTTGC TGTAACCAATAGTCAGGTATACAAAGAAACATTATTACAGATTGAAGTAATTGTGACTTG ACGTCGGTCGATATTATGTCGATTTCTATCCAACGCACTCTTGGCTCCTACAGCATTTAT TGGTACACAAAGTGGGCTTTGAAACTCA