Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G47840.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17651912-17654032 FORWARD LENGTH=2121 \| 201606
Sequence	ATGATTTCGAGTGTGAGAAATTGCGGCACAATCCAACGGTTTTGTACAACTTCGATTTCA TTGCTCCAGAAACCGGTTGAGGAGAACATTGTCCGTATCTCGAATCAGGTGATGGTCAAA TTTGATCCCAACTCTCACCTTAGGAGTCTCATCAATGCAGGGAATTTGCGAGCTGCTCGC CAAGTGTTCGATAAAATGCCCCACGGAGATATTGTTTCATGGACATCCATCATTAAAAGA TACGTAACTGCAAACAACTCTGACGAAGCACTGATTTTGTTCTCCGCAATGCGTGTTGTT GATCATGCCGTCTCACCTGATACCTCTGTGCTAAGTGTTGTACTCAAGGCTTGTGGTCAA AGCTCCAATATTGCATATGGAGAATCTTTGCATGCTTATGCGGTGAAAACTTCGCTTCTC AGCTCTGTATATGTGGGAAGTTCTTTACTGGATATGTATAAGAGAGTTGGAAAGATTGAT AAGAGTTGCAGAGTCTTTAGCGAAATGCCTTTTAGAAATGCTGTAACATGGACAGCGATT ATTACGGGGTTGGTTCACGCTGGTCGTTACAAGGAAGGTCTTACGTACTTTTCTGAAATG TCGAGATCGGAAGAACTATCTGATACTTATACATTTGCTATTGCCTTGAAGGCTTGTGCT GGTTTACGTCAAGTTAAATATGGTAAGGCGATTCATACTCATGTGATAGTGAGAGGCTTT GTTACCACTCTTTGCGTGGCTAACTCACTCGCGACAATGTACACTGAATGTGGGGAAATG CAGGACGGACTTTGTTTGTTTGAAAATATGAGTGAGAGGGATGTGGTTTCGTGGACAAGC CTTATTGTGGCTTACAAGCGAATCGGTCAAGAAGTAAAAGCTGTGGAGACATTTATAAAG ATGAGAAATTCTCAAGTCCCTCCTAATGAACAAACTTTTGCATCAATGTTTTCTGCGTGT GCGAGTCTTTCTAGACTTGTGTGGGGCGAGCAGCTCCACTGTAATGTTTTGTCTCTAGGT TTAAATGATTCTTTGTCAGTGAGTAACTCGATGATGAAGATGTATTCTACATGTGGGAAT TTAGTCTCTGCTTCTGTTTTGTTTCAAGGAATGAGATGCAGGGACATTATTTCGTGGAGT ACCATTATTGGAGGGTACTGTCAAGCCGGTTTTGGAGAAGAAGGTTTTAAGTATTTCTCA TGGATGAGACAATCAGGGACAAAACCAACAGATTTTGCTCTTGCTAGTTTGCTGAGTGTT TCAGGAAACATGGCAGTTATTGAGGGAGGCAGGCAAGTTCACGCGCTTGCTCTTTGTTTT GGTTTAGAACAGAACTCCACGGTTCGTAGTAGTCTGATTAATATGTACTCGAAATGTGGA AGTATCAAAGAAGCTTCAATGATATTCGGAGAAACAGATAGAGATGATATTGTTTCTCTG ACAGCTATGATCAATGGATATGCAGAACATGGAAAGAGCAAAGAAGCTATTGATCTGTTT GAGAAGAGTCTAAAGGTTGGTTTCAGACCCGACTCTGTAACTTTCATCAGCGTTCTCACC GCCTGCACTCATTCGGGACAGCTTGACCTTGGTTTTCACTATTTCAACATGATGCAAGAG ACGTATAATATGAGACCAGCCAAGGAACATTATGGTTGTATGGTTGATCTGTTATGTAGA GCAGGACGGCTAAGTGATGCAGAGAAGATGATCAATGAGATGTCATGGAAGAAAGACGAT GTAGTCTGGACCACACTTCTCATTGCGTGTAAGGCCAAAGGAGACATTGAACGTGGGAGA AGGGCTGCTGAGAGGATTCTAGAGCTGGATCCTACTTGTGCAACTGCACTTGTAACACTA GCCAATATATATTCAAGCACAGGGAACTTGGAAGAAGCTGCAAATGTAAGAAAGAATATG AAAGCAAAAGGCGTGATCAAAGAGCCCGGATGGTCATCAATTAAGATCAAGGATTGCGTT TCAGCGTTTGTATCTGGTGATCGGTTCCATCCGCAAAGTGAAGATATATACAATATCTTG GAATTAGCAGTATCTGGTGCAGAAGCTCATAGATTTGATTGCACATTAAAGAGAGCTTTT GGGGTTAATTTATATTCCTGA

Peptide Sequence

PEP ID	AT3G47840.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17651912-17654032 FORWARD LENGTH=706 \| 201606
Sequence	MISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAAR QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGR RAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCV SAFVSGDRFHPQSEDIYNILELAVSGAEAHRFDCTLKRAFGVNLYS

Transcript Sequence

Transcript ID	AT3G47840.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17651841-17654032 FORWARD LENGTH=2192 \| 201606
Sequence	GTTTATTATGTTTCTAGTTAATTCGGTACAATTGGTAAAGGTAACGATTGGTTTCGAATT TGAACAAAAACATGATTTCGAGTGTGAGAAATTGCGGCACAATCCAACGGTTTTGTACAA CTTCGATTTCATTGCTCCAGAAACCGGTTGAGGAGAACATTGTCCGTATCTCGAATCAGG TGATGGTCAAATTTGATCCCAACTCTCACCTTAGGAGTCTCATCAATGCAGGGAATTTGC GAGCTGCTCGCCAAGTGTTCGATAAAATGCCCCACGGAGATATTGTTTCATGGACATCCA TCATTAAAAGATACGTAACTGCAAACAACTCTGACGAAGCACTGATTTTGTTCTCCGCAA TGCGTGTTGTTGATCATGCCGTCTCACCTGATACCTCTGTGCTAAGTGTTGTACTCAAGG CTTGTGGTCAAAGCTCCAATATTGCATATGGAGAATCTTTGCATGCTTATGCGGTGAAAA CTTCGCTTCTCAGCTCTGTATATGTGGGAAGTTCTTTACTGGATATGTATAAGAGAGTTG GAAAGATTGATAAGAGTTGCAGAGTCTTTAGCGAAATGCCTTTTAGAAATGCTGTAACAT GGACAGCGATTATTACGGGGTTGGTTCACGCTGGTCGTTACAAGGAAGGTCTTACGTACT TTTCTGAAATGTCGAGATCGGAAGAACTATCTGATACTTATACATTTGCTATTGCCTTGA AGGCTTGTGCTGGTTTACGTCAAGTTAAATATGGTAAGGCGATTCATACTCATGTGATAG TGAGAGGCTTTGTTACCACTCTTTGCGTGGCTAACTCACTCGCGACAATGTACACTGAAT GTGGGGAAATGCAGGACGGACTTTGTTTGTTTGAAAATATGAGTGAGAGGGATGTGGTTT CGTGGACAAGCCTTATTGTGGCTTACAAGCGAATCGGTCAAGAAGTAAAAGCTGTGGAGA CATTTATAAAGATGAGAAATTCTCAAGTCCCTCCTAATGAACAAACTTTTGCATCAATGT TTTCTGCGTGTGCGAGTCTTTCTAGACTTGTGTGGGGCGAGCAGCTCCACTGTAATGTTT TGTCTCTAGGTTTAAATGATTCTTTGTCAGTGAGTAACTCGATGATGAAGATGTATTCTA CATGTGGGAATTTAGTCTCTGCTTCTGTTTTGTTTCAAGGAATGAGATGCAGGGACATTA TTTCGTGGAGTACCATTATTGGAGGGTACTGTCAAGCCGGTTTTGGAGAAGAAGGTTTTA AGTATTTCTCATGGATGAGACAATCAGGGACAAAACCAACAGATTTTGCTCTTGCTAGTT TGCTGAGTGTTTCAGGAAACATGGCAGTTATTGAGGGAGGCAGGCAAGTTCACGCGCTTG CTCTTTGTTTTGGTTTAGAACAGAACTCCACGGTTCGTAGTAGTCTGATTAATATGTACT CGAAATGTGGAAGTATCAAAGAAGCTTCAATGATATTCGGAGAAACAGATAGAGATGATA TTGTTTCTCTGACAGCTATGATCAATGGATATGCAGAACATGGAAAGAGCAAAGAAGCTA TTGATCTGTTTGAGAAGAGTCTAAAGGTTGGTTTCAGACCCGACTCTGTAACTTTCATCA GCGTTCTCACCGCCTGCACTCATTCGGGACAGCTTGACCTTGGTTTTCACTATTTCAACA TGATGCAAGAGACGTATAATATGAGACCAGCCAAGGAACATTATGGTTGTATGGTTGATC TGTTATGTAGAGCAGGACGGCTAAGTGATGCAGAGAAGATGATCAATGAGATGTCATGGA AGAAAGACGATGTAGTCTGGACCACACTTCTCATTGCGTGTAAGGCCAAAGGAGACATTG AACGTGGGAGAAGGGCTGCTGAGAGGATTCTAGAGCTGGATCCTACTTGTGCAACTGCAC TTGTAACACTAGCCAATATATATTCAAGCACAGGGAACTTGGAAGAAGCTGCAAATGTAA GAAAGAATATGAAAGCAAAAGGCGTGATCAAAGAGCCCGGATGGTCATCAATTAAGATCA AGGATTGCGTTTCAGCGTTTGTATCTGGTGATCGGTTCCATCCGCAAAGTGAAGATATAT ACAATATCTTGGAATTAGCAGTATCTGGTGCAGAAGCTCATAGATTTGATTGCACATTAA AGAGAGCTTTTGGGGTTAATTTATATTCCTGA