Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G47530.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:17517382-17519157 REVERSE LENGTH=1776 \| 201606
Sequence	ATGTTGAAGTCCATAAGCAGCAGCAGCGGCGACGATCATCTTCTTTCTCTGATCGTATCT TCCACCGGAAAACTCCATCTCCGGCAGATTCACGCCCTCTTACTCCGCACTTCCTTAATC AGAAACTCTGACGTTTTCCACCATTTCCTCTCTCGTCTCGCTCTCTCTCTGATTCCTCGA GACATCAATTACTCATGCCGAGTTTTCTCCCAGAGATTGAACCCAACTCTCTCTCACTGC AACACCATGATCAGAGCTTTCTCTCTCAGCCAAACTCCATGCGAAGGGTTTCGCTTGTTT CGATCTCTTCGACGAAACAGCTCTCTTCCTGCTAATCCGCTCTCGTCTTCTTTTGCTCTC AAGTGTTGTATCAAATCAGGTGACTTACTCGGTGGTTTGCAGATTCACGGCAAGATTTTC AGTGATGGGTTTCTCTCGGATAGTCTTCTTATGACGACTCTGATGGATCTTTACTCCACT TGCGAAAACAGTACTGATGCATGTAAAGTGTTCGACGAAATTCCCAAGAGAGATACTGTT TCTTGGAATGTGCTGTTTTCGTGTTATCTGCGGAATAAACGTACGAGAGATGTTTTAGTT TTGTTTGATAAGATGAAGAACGATGTCGATGGTTGTGTAAAACCAGATGGTGTAACATGT TTGTTAGCTTTACAAGCTTGTGCTAACTTGGGGGCGTTGGATTTTGGTAAACAAGTTCAT GACTTTATCGATGAAAATGGACTCAGTGGTGCTTTGAATTTGAGTAACACTCTGGTTTCA ATGTACTCACGTTGCGGGTCTATGGATAAGGCTTACCAAGTATTTTATGGAATGCGTGAA AGAAACGTAGTCTCGTGGACGGCTCTGATCTCGGGTTTAGCTATGAATGGGTTTGGAAAA GAAGCCATTGAAGCTTTCAACGAAATGTTGAAGTTTGGAATCTCTCCAGAGGAACAGACA CTCACTGGTTTATTGTCTGCCTGTAGCCATTCCGGGCTGGTCGCTGAAGGAATGATGTTT TTCGATAGAATGAGGAGTGGTGAATTTAAGATAAAGCCAAATTTACATCACTATGGCTGC GTTGTTGACCTCTTGGGACGTGCTCGTCTACTTGATAAAGCTTACAGTCTCATTAAGTCA ATGGAGATGAAACCGGACTCAACCATTTGGCGTACGCTTCTCGGGGCTTGTAGAGTCCAT GGAGATGTGGAACTTGGGGAACGTGTGATCTCTCATCTCATCGAACTCAAAGCCGAAGAA GCTGGAGATTACGTTCTGTTACTCAACACATACTCCACGGTTGGGAAATGGGAGAAAGTG ACTGAATTGCGTTCTTTAATGAAGGAGAAAAGAATCCATACTAAACCTGGATGCAGCGCG ATCGAGCTACAAGGAACCGTTCATGAGTTTATAGTAGACGATGTTTCGCATCCGCGGAAG GAAGAAATCTATAAAATGCTGGCGGAAATCAATCAGCAGCTGAAGATTGCGGGGTATGTG GCGGAAATTACATCGGAACTGCACAATCTTGAGTCAGAAGAAGAAAAGGGATACGCGTTA AGATACCATAGCGAGAAGCTAGCTATAGCCTTTGGGATTCTGGTGACTCCACCAGGAACA ACCATTAGAGTGACCAAGAATCTCAGAACTTGTGTTGATTGTCATAATTTTGCAAAGTTT GTATCTGATGTTTATGATCGTATCGTGATCGTTAGAGACCGTTCCAGATTTCATCATTTT AAAGGCGGCTCTTGCTCTTGTAATGACTTTTGGTGA

Peptide Sequence

PEP ID	AT3G47530.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:17517382-17519157 REVERSE LENGTH=591 \| 201606
Sequence	MLKSISSSSGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRK EEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGT TIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW

Transcript Sequence

Transcript ID	AT3G47530.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:17517303-17519305 REVERSE LENGTH=2003 \| 201606
Sequence	GTAATATTTATTCAAAACCAAAAATAAAACTGTTTTACATCATGTGCTTGCATATATCAA AACTTCAAGTTTTAATACTTAAAACGAAATAAAATTAGTAAAACCTTTTAAATCAAAGCT TAGTATACTTTCTTTTCACCAGAAGACTATGTTGAAGTCCATAAGCAGCAGCAGCGGCGA CGATCATCTTCTTTCTCTGATCGTATCTTCCACCGGAAAACTCCATCTCCGGCAGATTCA CGCCCTCTTACTCCGCACTTCCTTAATCAGAAACTCTGACGTTTTCCACCATTTCCTCTC TCGTCTCGCTCTCTCTCTGATTCCTCGAGACATCAATTACTCATGCCGAGTTTTCTCCCA GAGATTGAACCCAACTCTCTCTCACTGCAACACCATGATCAGAGCTTTCTCTCTCAGCCA AACTCCATGCGAAGGGTTTCGCTTGTTTCGATCTCTTCGACGAAACAGCTCTCTTCCTGC TAATCCGCTCTCGTCTTCTTTTGCTCTCAAGTGTTGTATCAAATCAGGTGACTTACTCGG TGGTTTGCAGATTCACGGCAAGATTTTCAGTGATGGGTTTCTCTCGGATAGTCTTCTTAT GACGACTCTGATGGATCTTTACTCCACTTGCGAAAACAGTACTGATGCATGTAAAGTGTT CGACGAAATTCCCAAGAGAGATACTGTTTCTTGGAATGTGCTGTTTTCGTGTTATCTGCG GAATAAACGTACGAGAGATGTTTTAGTTTTGTTTGATAAGATGAAGAACGATGTCGATGG TTGTGTAAAACCAGATGGTGTAACATGTTTGTTAGCTTTACAAGCTTGTGCTAACTTGGG GGCGTTGGATTTTGGTAAACAAGTTCATGACTTTATCGATGAAAATGGACTCAGTGGTGC TTTGAATTTGAGTAACACTCTGGTTTCAATGTACTCACGTTGCGGGTCTATGGATAAGGC TTACCAAGTATTTTATGGAATGCGTGAAAGAAACGTAGTCTCGTGGACGGCTCTGATCTC GGGTTTAGCTATGAATGGGTTTGGAAAAGAAGCCATTGAAGCTTTCAACGAAATGTTGAA GTTTGGAATCTCTCCAGAGGAACAGACACTCACTGGTTTATTGTCTGCCTGTAGCCATTC CGGGCTGGTCGCTGAAGGAATGATGTTTTTCGATAGAATGAGGAGTGGTGAATTTAAGAT AAAGCCAAATTTACATCACTATGGCTGCGTTGTTGACCTCTTGGGACGTGCTCGTCTACT TGATAAAGCTTACAGTCTCATTAAGTCAATGGAGATGAAACCGGACTCAACCATTTGGCG TACGCTTCTCGGGGCTTGTAGAGTCCATGGAGATGTGGAACTTGGGGAACGTGTGATCTC TCATCTCATCGAACTCAAAGCCGAAGAAGCTGGAGATTACGTTCTGTTACTCAACACATA CTCCACGGTTGGGAAATGGGAGAAAGTGACTGAATTGCGTTCTTTAATGAAGGAGAAAAG AATCCATACTAAACCTGGATGCAGCGCGATCGAGCTACAAGGAACCGTTCATGAGTTTAT AGTAGACGATGTTTCGCATCCGCGGAAGGAAGAAATCTATAAAATGCTGGCGGAAATCAA TCAGCAGCTGAAGATTGCGGGGTATGTGGCGGAAATTACATCGGAACTGCACAATCTTGA GTCAGAAGAAGAAAAGGGATACGCGTTAAGATACCATAGCGAGAAGCTAGCTATAGCCTT TGGGATTCTGGTGACTCCACCAGGAACAACCATTAGAGTGACCAAGAATCTCAGAACTTG TGTTGATTGTCATAATTTTGCAAAGTTTGTATCTGATGTTTATGATCGTATCGTGATCGT TAGAGACCGTTCCAGATTTCATCATTTTAAAGGCGGCTCTTGCTCTTGTAATGACTTTTG GTGATGATTCAAGCTGATAACATTTTTCTTCTAATCATTACGAGTTTGAAACAAGCTCAT AACTTATGTTGATTGCAATAATG