Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G47460.2
CDS Infomation	\| Structural maintenance of chromosomes (SMC) family protein \| Chr3:17486765-17493178 FORWARD LENGTH=3525 \| 201606
Sequence	ATGCATATAAAGGAGATATGCTTGGAAGGTTTCAAATCATACGCAACGAGGACAGTAGTT CCGGGTTTTGACCCGCATTTCAACGCGATTACGGGTCTAAACGGATCCGGAAAATCCAAC ATCCTCGATTCCATCTGCTTCGTTCTAGGTATCACTAATCTTCAACAAGTTCGAGCTGCT AATCTACAGGAACTCGTTTACAAGCAAGGACAAGCTGGAATCACTAGAGCCACTGTTTCA GTTACCTTCGACAATTCCGAGAGAAATCGAAGTCCTTTAGGTCATGAAGATCATTCAGAG ATTACAGTAACTAGACAAATTGTAGTTGGTGGAAAGAACAAGTATTTGATCAATGGGAAG CTTGCACAACCAAATCAAGTTCAGAATCTTTTCCATTCGGTGCAGCTTAATGTGAACAAT CCTCATTTTCTGATTATGCAAGGGCGTATTACCAAAGTTTTAAACATGAAACCTATGGAG ATTTTATCTATGCTTGAAGAAGCTGCTGGTACGAGAATGTATGAGAATAAGAAAGAGGCT GCGTTAAAGACGTTGGAGAAAAAGCAAACTAAGGTTGATGAGATTAATAAGCTTCTTGAG AAAGATATATTGCCAGCTTTGGAGAAGTTGAGGAGAGAAAAGTCGCAGTATATGCAGTGG GCTAATGGTAATGCGGAATTAGATCGGTTAAAGAGGTTTTGTGTCGCTTTTGAGTATGTG CAAGCGGAGAAGATTAGAGATAATTCGATACATGTTGTTGAAGAAATGAAGATAAAAATG ACTGGTATTGATGAGCAGACAGATAAGACACAGGGTGAAATATCGGAACTGGAGAAACAG ATTAAAGCTTTGACTCAAGCAAGGGAAGCTAGTATGGGAGGAGAAGTAAAAGCTTTGTCT GACAAAGTTGATTCATTGTCTAATGAAGTGACACGTGAATTATCCAAGCTTACTAATATG GAGGACACCCTTCAAGGCGAAGAAAAGAATGCTGAAAAGATGGTTCATAATATAGAAGAT TTGAAGAAATCTGTAGAAGAAAGAGCTTCTGCTCTCAACAAGTGTGACGAAGGAGCAGCA GAACTAAAACAAAAATTCCAGGAATTTTCAACCACATTGGAAGAGTGTGAAAGAGAACAC CAGGGTATACTAGCTGGTAAGAGTAGTGGAGATGAAGAGAAATGTCTCGAAGATCAACTA CGTGATGCAAAGATTTCTGTTGGAACAGCTGAAACGGAGTTGAAGCAGCTGAATACCAAA ATTAGTCACTGTGAAAAGGAACTAAAAGAGAAAAAGTCTCAGTTAATGTCAAAACAAGAC GAAGCTGTTGCAGTGGAAAATGAACTTGATGCTAGAAAAAATGATGTAGAAAGTGTAAAA AGGGCATTTGATTCTCTTCCATATAAAGAGGGTCAGATGGAAGCATTGGAGAAGGATCGA GAATCAGAACTTGAAATTGGGCACAGGCTGAAAGATAAAGTGCACGAACTTTCGGCTCAA TTAGCAAATGTTCAGTTTACATACCGCGATCCTGTGAAAAACTTTGATCGATCAAAGGTG AAAGGTGTGGTTGCAAAACTGATAAAAGTGAATGATAGGTCCTCAATGACAGCTTTGGAG GTTACTGCTGGTGGGAAGTTATTTAATGTTATTGTAGACACAGAAGATACTGGAAAACAG CTCCTTCAAAAGGGTGATCTTCGGAGAAGAGTTACAATTATTCCTCTTAACAAAATTCAG TCTCACCTAGTTCCACCTAGAGTGCAGCAAGCCACTGTTAAATTAGTTGGAAAGGGTAAT GCGGAATTGGCACTTTCTTTAGTTGGTTATAGTGAAGAATTAAAGAATGCCATGGAATAT GTTTTTGGTTCCACTTTTGTTTGCAAAACTACTGATGCGGCTAAGGAAGTAGCATTTAAT AGGGAAATTCGGACTCCTAGTGTTACACTTGAAGGTGATGTATTTCAGCCAAGTGGTCTT CTTACTGGTGGAAGTCGCAAGGGTGGAGGTGATCTGCTAAGACAACTTCATGATCTGGCC GAGGCTGAAACAAAATTTCGAGCACATCAGAAAAGTTTGTCTGAAATTGAAGCAAACATC AAGGAGCTTCAGCCTCTTCAAACGAAGTTCACAGACATGAAAGCACAGTTGGAGCTGAAA ATGTATGACATGTCCTTATTTCTAAAAAGGGCTGAACAGAACGAGCACCACAAGCTTGGT GACGCAGTGAAGAAACTTGAAGAAGAGGTTGAAGAAATGAGATCCCAAATCAAAGAGAAG GAAGGTCTTTACAAAAGTTGTGCTGATACTGTCTCCACGCTGGAGAAATCCATCAAAGAT CATGATAAGAACAGAGAGGGAAGACTCAAGGACTTGGAAAAGAATATTAAAACTCTAAAA GCTCGTATTCAGGCATCCTCAAAAGATCTAAAGGGTCATGAAAACGTAAGGGAGAGGCTT GTGATGGAGCAAGAAGCAGTGACGCAGGAACAGTCATATTTAAAGAGCCAGCTAACTTCA TTGAGGACGCAAATTAGCACTCTGGCTTCAGATGTGGGCAATCAACGAGCCAAGGTGGAT GCCATACAGAAGGATCATGATCAGTCTCTCTCTGAGCTCAAGTTGATACATGCAAAGATG AAGGAATGTGATACACAGATTAGTGGTTCTATTGCAGAGCAGGAAAAGTGTCTGCAGAAG ATTAGTGACATGAAGCTTGACAGAAAGAAGTTAGAAAATGAGGTGACAAGGATGGAGATG GAGCACAAGAATTGTTCAGTGAAGGTAGACAAACTTGTTGAGAAGCATACATGGATTACA TCTGAGAAGCGGCTTTTTGGAAACGGAGGGACAGACTATGATTTTGAATCCCGCGATCCT CACAAAGCAAGAGAAGAACTTGAAAGACTCCAGACAGATCAATCAAGTCTAGAGAAAAGA GTGAACAAGAAGGTCACGGCTATGTTTGAGAAAGCTGAAGATGAATATAATGCTCTTATG ACCAAGAAAAATATAATCGAGACTGACAAATCAAAAATCAAGAAAGTTATTGAGGAGCTT GATGAGAAGAAAAAAGAAACACTGAAAGTTACATGGGTTAAAGTTAACCAGGATTTTGGT TCCATCTTTTCAACTCTACTACCTGGCACCATGTCAAAATTAGAACCTCCAGAGGGAGGT ACTTTCCTTGATGGTCTTGAGGTCCGTGTTGCTTTTGGAGATGTCTGGAAACAGTCTTTA TCTGAACTAAGTGGAGGGCAAAGATCTCTTCTTGCACTATCTTTAATCCTGGCGTTGCTA CTCTTTAAGCCAGCTCCTATTTATATCTTAGATGAGGTTGATGCAGCTCTTGATCTAAGC CACACACAGAACATAGGAAGAATGATAAAATCTCATTTCCCACATTCACAGTTCATTGTG GTTTCACTGAAAGAAGGAATGTTCAGCAACGCCGATGTTCTCTTCCGAACAAAATTCGTG GATGGTGTTTCAACGGTCCAGAGGACAGTAACAAAACAGAGCTAA

Peptide Sequence

PEP ID	AT3G47460.2
PEP Infomation	\| Structural maintenance of chromosomes (SMC) family protein \| Chr3:17486765-17493178 FORWARD LENGTH=1174 \| 201606
Sequence	MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA NLQELVYKQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLINGK LAQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPMEILSMLEEAAGTRMYENKKEA ALKTLEKKQTKVDEINKLLEKDILPALEKLRREKSQYMQWANGNAELDRLKRFCVAFEYV QAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVKALS DKVDSLSNEVTRELSKLTNMEDTLQGEEKNAEKMVHNIEDLKKSVEERASALNKCDEGAA ELKQKFQEFSTTLEECEREHQGILAGKSSGDEEKCLEDQLRDAKISVGTAETELKQLNTK ISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKRAFDSLPYKEGQMEALEKDR ESELEIGHRLKDKVHELSAQLANVQFTYRDPVKNFDRSKVKGVVAKLIKVNDRSSMTALE VTAGGKLFNVIVDTEDTGKQLLQKGDLRRRVTIIPLNKIQSHLVPPRVQQATVKLVGKGN AELALSLVGYSEELKNAMEYVFGSTFVCKTTDAAKEVAFNREIRTPSVTLEGDVFQPSGL LTGGSRKGGGDLLRQLHDLAEAETKFRAHQKSLSEIEANIKELQPLQTKFTDMKAQLELK MYDMSLFLKRAEQNEHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKD HDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTS LRTQISTLASDVGNQRAKVDAIQKDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQK ISDMKLDRKKLENEVTRMEMEHKNCSVKVDKLVEKHTWITSEKRLFGNGGTDYDFESRDP HKAREELERLQTDQSSLEKRVNKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEEL DEKKKETLKVTWVKVNQDFGSIFSTLLPGTMSKLEPPEGGTFLDGLEVRVAFGDVWKQSL SELSGGQRSLLALSLILALLLFKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIV VSLKEGMFSNADVLFRTKFVDGVSTVQRTVTKQS

Transcript Sequence

Transcript ID	AT3G47460.2
Transcript Infomation	\| Structural maintenance of chromosomes (SMC) family protein \| Chr3:17486490-17493395 FORWARD LENGTH=4017 \| 201606
Sequence	CAGAAGGCCCAATTTTAAAGAGAAAATTATGTTTTTTTATTTGGTAAATTGAAAAAAAGA AAAAAGAAAAATTCAAATTTGCTTGTAATAATCCTCTCAAAGAGAATTCAGTTAGACGAT TCGTCTCTACTTCTCCTGCAACGGTTAGATTTTGAATCTACGCTCTCAATTTCGGAAGCT TGTTGTGATACTTCCGTCTGGGTTTCCATTTCTAGGGTTTATGGGGTTTAGTTTCTAAAT TAGGGTAAAATTTGGGGAAGAAGAAGACAACAAAGATGCATATAAAGGAGATATGCTTGG AAGGTTTCAAATCATACGCAACGAGGACAGTAGTTCCGGGTTTTGACCCGCATTTCAACG CGATTACGGGTCTAAACGGATCCGGAAAATCCAACATCCTCGATTCCATCTGCTTCGTTC TAGGTATCACTAATCTTCAACAAGTTCGAGCTGCTAATCTACAGGAACTCGTTTACAAGC AAGGACAAGCTGGAATCACTAGAGCCACTGTTTCAGTTACCTTCGACAATTCCGAGAGAA ATCGAAGTCCTTTAGGTCATGAAGATCATTCAGAGATTACAGTAACTAGACAAATTGTAG TTGGTGGAAAGAACAAGTATTTGATCAATGGGAAGCTTGCACAACCAAATCAAGTTCAGA ATCTTTTCCATTCGGTGCAGCTTAATGTGAACAATCCTCATTTTCTGATTATGCAAGGGC GTATTACCAAAGTTTTAAACATGAAACCTATGGAGATTTTATCTATGCTTGAAGAAGCTG CTGGTACGAGAATGTATGAGAATAAGAAAGAGGCTGCGTTAAAGACGTTGGAGAAAAAGC AAACTAAGGTTGATGAGATTAATAAGCTTCTTGAGAAAGATATATTGCCAGCTTTGGAGA AGTTGAGGAGAGAAAAGTCGCAGTATATGCAGTGGGCTAATGGTAATGCGGAATTAGATC GGTTAAAGAGGTTTTGTGTCGCTTTTGAGTATGTGCAAGCGGAGAAGATTAGAGATAATT CGATACATGTTGTTGAAGAAATGAAGATAAAAATGACTGGTATTGATGAGCAGACAGATA AGACACAGGGTGAAATATCGGAACTGGAGAAACAGATTAAAGCTTTGACTCAAGCAAGGG AAGCTAGTATGGGAGGAGAAGTAAAAGCTTTGTCTGACAAAGTTGATTCATTGTCTAATG AAGTGACACGTGAATTATCCAAGCTTACTAATATGGAGGACACCCTTCAAGGCGAAGAAA AGAATGCTGAAAAGATGGTTCATAATATAGAAGATTTGAAGAAATCTGTAGAAGAAAGAG CTTCTGCTCTCAACAAGTGTGACGAAGGAGCAGCAGAACTAAAACAAAAATTCCAGGAAT TTTCAACCACATTGGAAGAGTGTGAAAGAGAACACCAGGGTATACTAGCTGGTAAGAGTA GTGGAGATGAAGAGAAATGTCTCGAAGATCAACTACGTGATGCAAAGATTTCTGTTGGAA CAGCTGAAACGGAGTTGAAGCAGCTGAATACCAAAATTAGTCACTGTGAAAAGGAACTAA AAGAGAAAAAGTCTCAGTTAATGTCAAAACAAGACGAAGCTGTTGCAGTGGAAAATGAAC TTGATGCTAGAAAAAATGATGTAGAAAGTGTAAAAAGGGCATTTGATTCTCTTCCATATA AAGAGGGTCAGATGGAAGCATTGGAGAAGGATCGAGAATCAGAACTTGAAATTGGGCACA GGCTGAAAGATAAAGTGCACGAACTTTCGGCTCAATTAGCAAATGTTCAGTTTACATACC GCGATCCTGTGAAAAACTTTGATCGATCAAAGGTGAAAGGTGTGGTTGCAAAACTGATAA AAGTGAATGATAGGTCCTCAATGACAGCTTTGGAGGTTACTGCTGGTGGGAAGTTATTTA ATGTTATTGTAGACACAGAAGATACTGGAAAACAGCTCCTTCAAAAGGGTGATCTTCGGA GAAGAGTTACAATTATTCCTCTTAACAAAATTCAGTCTCACCTAGTTCCACCTAGAGTGC AGCAAGCCACTGTTAAATTAGTTGGAAAGGGTAATGCGGAATTGGCACTTTCTTTAGTTG GTTATAGTGAAGAATTAAAGAATGCCATGGAATATGTTTTTGGTTCCACTTTTGTTTGCA AAACTACTGATGCGGCTAAGGAAGTAGCATTTAATAGGGAAATTCGGACTCCTAGTGTTA CACTTGAAGGTGATGTATTTCAGCCAAGTGGTCTTCTTACTGGTGGAAGTCGCAAGGGTG GAGGTGATCTGCTAAGACAACTTCATGATCTGGCCGAGGCTGAAACAAAATTTCGAGCAC ATCAGAAAAGTTTGTCTGAAATTGAAGCAAACATCAAGGAGCTTCAGCCTCTTCAAACGA AGTTCACAGACATGAAAGCACAGTTGGAGCTGAAAATGTATGACATGTCCTTATTTCTAA AAAGGGCTGAACAGAACGAGCACCACAAGCTTGGTGACGCAGTGAAGAAACTTGAAGAAG AGGTTGAAGAAATGAGATCCCAAATCAAAGAGAAGGAAGGTCTTTACAAAAGTTGTGCTG ATACTGTCTCCACGCTGGAGAAATCCATCAAAGATCATGATAAGAACAGAGAGGGAAGAC TCAAGGACTTGGAAAAGAATATTAAAACTCTAAAAGCTCGTATTCAGGCATCCTCAAAAG ATCTAAAGGGTCATGAAAACGTAAGGGAGAGGCTTGTGATGGAGCAAGAAGCAGTGACGC AGGAACAGTCATATTTAAAGAGCCAGCTAACTTCATTGAGGACGCAAATTAGCACTCTGG CTTCAGATGTGGGCAATCAACGAGCCAAGGTGGATGCCATACAGAAGGATCATGATCAGT CTCTCTCTGAGCTCAAGTTGATACATGCAAAGATGAAGGAATGTGATACACAGATTAGTG GTTCTATTGCAGAGCAGGAAAAGTGTCTGCAGAAGATTAGTGACATGAAGCTTGACAGAA AGAAGTTAGAAAATGAGGTGACAAGGATGGAGATGGAGCACAAGAATTGTTCAGTGAAGG TAGACAAACTTGTTGAGAAGCATACATGGATTACATCTGAGAAGCGGCTTTTTGGAAACG GAGGGACAGACTATGATTTTGAATCCCGCGATCCTCACAAAGCAAGAGAAGAACTTGAAA GACTCCAGACAGATCAATCAAGTCTAGAGAAAAGAGTGAACAAGAAGGTCACGGCTATGT TTGAGAAAGCTGAAGATGAATATAATGCTCTTATGACCAAGAAAAATATAATCGAGACTG ACAAATCAAAAATCAAGAAAGTTATTGAGGAGCTTGATGAGAAGAAAAAAGAAACACTGA AAGTTACATGGGTTAAAGTTAACCAGGATTTTGGTTCCATCTTTTCAACTCTACTACCTG GCACCATGTCAAAATTAGAACCTCCAGAGGGAGGTACTTTCCTTGATGGTCTTGAGGTCC GTGTTGCTTTTGGAGATGTCTGGAAACAGTCTTTATCTGAACTAAGTGGAGGGCAAAGAT CTCTTCTTGCACTATCTTTAATCCTGGCGTTGCTACTCTTTAAGCCAGCTCCTATTTATA TCTTAGATGAGGTTGATGCAGCTCTTGATCTAAGCCACACACAGAACATAGGAAGAATGA TAAAATCTCATTTCCCACATTCACAGTTCATTGTGGTTTCACTGAAAGAAGGAATGTTCA GCAACGCCGATGTTCTCTTCCGAACAAAATTCGTGGATGGTGTTTCAACGGTCCAGAGGA CAGTAACAAAACAGAGCTAATAACCTGCTTATATCCTTAACAACACTAATGATGTATATA CTCTTCTTTCCTCAATCAGGTTGGCTTATATGTGTGTTCTACGTATCTTTTAAGATCTGT AGCCAATTATTTGTTGGTACCTATTGTCTATGTCTAGAGACCGAAGCTTAACTTAAACTT TTGTTTTTTTTGTTGCAAATGTATTAAGAGATTGTGAATCTAAGTTATGGTGTGCTT