Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G47290.2
CDS Infomation

| phosphatidylinositol-speciwc phospholipase C8 | Chr3:17420606-17424049 FORWARD LENGTH=1722 | 201606
Sequence

ATGTTAGTTACGAGGCGATGGGAATCGCATCCGGCGAACTCGCCGGACCTCATCTTACAG
TTTTTTGGGAATGAATTCCACGGCTACGGTGACGATATGCCTGAGACATTGCGGAGGTTG
ACGGAGTTGCTGGGTTATGAGAAGGAAGAAGACGGCGCCGGAATGAATGCAGCCAAGAAA
ATCGCGGCGGAATTGAATCGCCGAAAAGATGATATACCGGCTTTCAGACGCTTGCGGTGT
CTCGAGCTTGATCAGTTGAACGAGTTTCTTTTTTCTACGAAGCTCAATCCCCCGATCGGT
GACCAGGTTCATCATGACATGCATGCTCCGCTGTCGCATTACTTCATTCACACCAGCCTC
AATTCCTACTTCACCGGGAATGTCTTTGGGAAATACAGCATTTTGCCCATCATTGAAGCA
CTTGAACAGGGTGTGAGGGTGGTTGAACTAGATCTGTGGCCGGATGGTAGAGGCAGCATC
TGCGTTAGGCCTAGCTGGAACTTTGAGAAGCCTCTGAAATTGCAAGAGTGTTTGGATTCT
ATTAAAGAACATGCCTTTACCAAATGTACATATCCCTTGATAATTACGTTCAAGGACGGC
TTGAAACCGGAACTTCAATCCAAAGCTACTCAGATGATACAACAGACATTTAATCATATG
GTATATCACCATGATCCTCATAGTTTGGAGGTTTTTCCTTCGCCACAACAACTGCGAAAT
AAGATACTAATATCAAGAAGACCCCCAAAAGAGTTGTTATATGCTAATGATGATGATGGA
AAGGTTGGCGTACGGAATGGGGTTGAGATAAGACAACACCCGGCAGATCCAAATTACCAG
AGTTTAGTTTCCTTCCATGTAGTGGAGCCAAGAGGCATGCTACAAAACGTATTAACAGGC
AAGGCTAACAAAATCCAACGACCAGGATGGTACGAAACAGATATTATAAGCTTCACCCAA
AAGAGATTCTTGCGGACACGTCCACAACGGAAATTGTTGATCTATGCCCCCTATAAACCC
CAAAGAGCGTGGATGCACGGTGCTCAATTGATTGCACTAAGCAGGAAGGAGGAGAAAGAA
AAACTTTGGTTGATGCAAGGGATGTTTAGAGCAAATGGAGGGTGCGGTTATGTCAAGAAG
CCGGATTTCCTTTTGAATGCTGGTCCTAGTGGAGTTTTCTATCCAACAGTGAATCCGGTG
GTTGTGAAGATATTGAAGGTCAAAATCTACATGGGAGATGGATGGATTGTGGACTTCAAG
AAGCGCATAGGTCGACTGTCTAAGCCGGACTTATACGTTAGGATTAGTATTGCCGGTGTA
CCCCATGATGAGAACATTATGAAAACAACGGTGAAAAACAACGAATGGACACCTACATGG
GGAGAAGAATTCACATTCCCTTTGACCTATCCTGACCTTGCTTTGATTAGTTTTGAAGTT
TATGACTACGAAGTATCGACTGCAGATGCATTTTGTGGTCAGACTTGTCTACCGGTTTCT
GAACTAATAGAAGGAATTCGTGCTGTTCCGCTCTATGATGAAAGAGTGCAAAATTGCAAA
ATGTGGCGACATGATGTTGACATCAGAACCAAAGAAGACCCAGAGTTGACCAGACTAGCC
GGTTCAAACATCAACCAAACCAAACCGGACCAAAAAGGAGAATTTTGGTGCAAACCAAGT
TCCGATCAAGCAACTGACCTAGGATTGGATATTTACAAATAA

Peptide Sequence

PEP ID

AT3G47290.2
PEP Infomation

| phosphatidylinositol-speciwc phospholipase C8 | Chr3:17420606-17424049 FORWARD LENGTH=573 | 201606
Sequence

MLVTRRWESHPANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKK
IAAELNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQVHHDMHAPLSHYFIHTSL
NSYFTGNVFGKYSILPIIEALEQGVRVVELDLWPDGRGSICVRPSWNFEKPLKLQECLDS
IKEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRN
KILISRRPPKELLYANDDDGKVGVRNGVEIRQHPADPNYQSLVSFHVVEPRGMLQNVLTG
KANKIQRPGWYETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKE
KLWLMQGMFRANGGCGYVKKPDFLLNAGPSGVFYPTVNPVVVKILKVKIYMGDGWIVDFK
KRIGRLSKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEV
YDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERVQNCKMWRHDVDIRTKEDPELTRLA
GSNINQTKPDQKGEFWCKPSSDQATDLGLDIYK

Transcript Sequence

Transcript ID

AT3G47290.2
Transcript Infomation

| phosphatidylinositol-speciwc phospholipase C8 | Chr3:17420510-17424342 FORWARD LENGTH=2111 | 201606
Sequence

ACGTTTTAGTGTATCCGATTATGGTTCGACAGAGAGCATAGAAACAAAAGTTTCCTCCAC
TTGTTGTTTCAACAAAACAAAATCCTCCCCTTTCATATGTTAGTTACGAGGCGATGGGAA
TCGCATCCGGCGAACTCGCCGGACCTCATCTTACAGTTTTTTGGGAATGAATTCCACGGC
TACGGTGACGATATGCCTGAGACATTGCGGAGGTTGACGGAGTTGCTGGGTTATGAGAAG
GAAGAAGACGGCGCCGGAATGAATGCAGCCAAGAAAATCGCGGCGGAATTGAATCGCCGA
AAAGATGATATACCGGCTTTCAGACGCTTGCGGTGTCTCGAGCTTGATCAGTTGAACGAG
TTTCTTTTTTCTACGAAGCTCAATCCCCCGATCGGTGACCAGGTTCATCATGACATGCAT
GCTCCGCTGTCGCATTACTTCATTCACACCAGCCTCAATTCCTACTTCACCGGGAATGTC
TTTGGGAAATACAGCATTTTGCCCATCATTGAAGCACTTGAACAGGGTGTGAGGGTGGTT
GAACTAGATCTGTGGCCGGATGGTAGAGGCAGCATCTGCGTTAGGCCTAGCTGGAACTTT
GAGAAGCCTCTGAAATTGCAAGAGTGTTTGGATTCTATTAAAGAACATGCCTTTACCAAA
TGTACATATCCCTTGATAATTACGTTCAAGGACGGCTTGAAACCGGAACTTCAATCCAAA
GCTACTCAGATGATACAACAGACATTTAATCATATGGTATATCACCATGATCCTCATAGT
TTGGAGGTTTTTCCTTCGCCACAACAACTGCGAAATAAGATACTAATATCAAGAAGACCC
CCAAAAGAGTTGTTATATGCTAATGATGATGATGGAAAGGTTGGCGTACGGAATGGGGTT
GAGATAAGACAACACCCGGCAGATCCAAATTACCAGAGTTTAGTTTCCTTCCATGTAGTG
GAGCCAAGAGGCATGCTACAAAACGTATTAACAGGCAAGGCTAACAAAATCCAACGACCA
GGATGGTACGAAACAGATATTATAAGCTTCACCCAAAAGAGATTCTTGCGGACACGTCCA
CAACGGAAATTGTTGATCTATGCCCCCTATAAACCCCAAAGAGCGTGGATGCACGGTGCT
CAATTGATTGCACTAAGCAGGAAGGAGGAGAAAGAAAAACTTTGGTTGATGCAAGGGATG
TTTAGAGCAAATGGAGGGTGCGGTTATGTCAAGAAGCCGGATTTCCTTTTGAATGCTGGT
CCTAGTGGAGTTTTCTATCCAACAGTGAATCCGGTGGTTGTGAAGATATTGAAGGTCAAA
ATCTACATGGGAGATGGATGGATTGTGGACTTCAAGAAGCGCATAGGTCGACTGTCTAAG
CCGGACTTATACGTTAGGATTAGTATTGCCGGTGTACCCCATGATGAGAACATTATGAAA
ACAACGGTGAAAAACAACGAATGGACACCTACATGGGGAGAAGAATTCACATTCCCTTTG
ACCTATCCTGACCTTGCTTTGATTAGTTTTGAAGTTTATGACTACGAAGTATCGACTGCA
GATGCATTTTGTGGTCAGACTTGTCTACCGGTTTCTGAACTAATAGAAGGAATTCGTGCT
GTTCCGCTCTATGATGAAAGAGTGCAAAATTGCAAAATGTGGCGACATGATGTTGACATC
AGAACCAAAGAAGACCCAGAGTTGACCAGACTAGCCGGTTCAAACATCAACCAAACCAAA
CCGGACCAAAAAGGAGAATTTTGGTGCAAACCAAGTTCCGATCAAGCAACTGACCTAGGA
TTGGATATTTACAAATAAATCCATCATAAGAAGAGTAATGATTCAGCTGTAATCATAAAT
CACCATGTCGAACTGAATTTGGTCCGCGATGACCCACCCAAAGCACACAATACTCAAATA
CACCAACTCAATGAAGAGTTTTCCAGACCTAAATTGAATATTCACCAGAAAGTTACATAT
TTCAAGACATGGCGATACATAAACAATAACTTCTGAACCAATCAACTAGAGAGCCGAGAA
GACCCATCCGGATCAAGTCAACTACAAGATCATCGACCCAAAGTCACATTTTCTCAACCT
ATCTTTGATAT