Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G47180.1
CDS Infomation

| RING/U-box superfamily protein | Chr3:17372821-17373453 REVERSE LENGTH=633 | 201606
Sequence

ATGGATAACCAAGAAGAAGAGCCTAAGCAACCTCCAAACAAACTTCCCGATCTAGCCCTC
TTTGAGCAAGCAAATTCTGAAGTTGCTCTTGCTGCCTCCCAAGCTAATTCCCATTTTGCC
CATGCTATGCATGATTCGTCTCCCTCAATGATTTCAATGATAGAAAGTGACGAAGAATCT
GAAGATGAAGAAGAAATCAATGAGAACTACTACGAGTATTTCGATAGCAATGGATTTGGA
GTAGATGAAGACGAAATCAATGAGTTTCTTGAAGATCAAGAAAGCAATTCCAACCTTGAG
GAGGAGGATGATTTCTTGGAGGAAGAAGATGAGATTGATCCCGACCAATTGTCTTACGAG
GAACTGATTGCGCTTGGAGATTTCATCGGAGTCGAAAACCGTGGGCTAACTCCTATTGAA
ATCTCTACGTGTTTGAACGCATCTACATACGTATTTTCACATAACAAAAACGAGATTGAT
CGTTGTGTAGTTTGCCAAATGGAGTTTGAAGAAAGAGAATCTTTGGTCGTTCTCCGACCT
TGTGACCATCCATACCACTCTGAGTGTATAACCAAATGGCTTGAGACAAAGAAGATTTGT
CCCATTTGTTGTTCTGAACCATCTGTCAGTTGA

Peptide Sequence

PEP ID

AT3G47180.1
PEP Infomation

| RING/U-box superfamily protein | Chr3:17372821-17373453 REVERSE LENGTH=210 | 201606
Sequence

MDNQEEEPKQPPNKLPDLALFEQANSEVALAASQANSHFAHAMHDSSPSMISMIESDEES
EDEEEINENYYEYFDSNGFGVDEDEINEFLEDQESNSNLEEEDDFLEEEDEIDPDQLSYE
ELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDRCVVCQMEFEERESLVVLRP
CDHPYHSECITKWLETKKICPICCSEPSVS

Transcript Sequence

Transcript ID

AT3G47180.1
Transcript Infomation

| RING/U-box superfamily protein | Chr3:17372731-17373547 REVERSE LENGTH=817 | 201606
Sequence

TGCTTAAGTAACCTCTCTGACATGAAAGCCATTTTCATATAAAATTCCGGAGCTCGGCTT
CCTAACCATAACACAATCTACTTATTCTTCTCTAATGGATAACCAAGAAGAAGAGCCTAA
GCAACCTCCAAACAAACTTCCCGATCTAGCCCTCTTTGAGCAAGCAAATTCTGAAGTTGC
TCTTGCTGCCTCCCAAGCTAATTCCCATTTTGCCCATGCTATGCATGATTCGTCTCCCTC
AATGATTTCAATGATAGAAAGTGACGAAGAATCTGAAGATGAAGAAGAAATCAATGAGAA
CTACTACGAGTATTTCGATAGCAATGGATTTGGAGTAGATGAAGACGAAATCAATGAGTT
TCTTGAAGATCAAGAAAGCAATTCCAACCTTGAGGAGGAGGATGATTTCTTGGAGGAAGA
AGATGAGATTGATCCCGACCAATTGTCTTACGAGGAACTGATTGCGCTTGGAGATTTCAT
CGGAGTCGAAAACCGTGGGCTAACTCCTATTGAAATCTCTACGTGTTTGAACGCATCTAC
ATACGTATTTTCACATAACAAAAACGAGATTGATCGTTGTGTAGTTTGCCAAATGGAGTT
TGAAGAAAGAGAATCTTTGGTCGTTCTCCGACCTTGTGACCATCCATACCACTCTGAGTG
TATAACCAAATGGCTTGAGACAAAGAAGATTTGTCCCATTTGTTGTTCTGAACCATCTGT
CAGTTGAAATGTAATGGTATAAATATTTTAATTATCATTAATTAGTTTATTAACTTTTTT
GGGGGATTAAACCTACGACCTCTAGGTTTTGCATGGG