Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G47080.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17338415-17340129 REVERSE LENGTH=1548 \| 201606
Sequence	ATGGAAGTGAAAGTAGCAACAACGACGTCGTTTCATTGGTCAGGACGACACACAGCGATT CCTCAATGTCCGTCATTTTCGCAAACCCTAACTTCATCTAAACGCCGTCGTTCTCGTGGA ATAGCCGGTGATGTTTCCGTCGGAGGAGGATCTTTGAGATTAAAACCTTCGACGTTTCTC GGAACACAATCTGGGAAACTTCACCGATCTAAATCATGTGAGCTTTGGCAATTTTCTAAT TCCACCACGAAGAAGATTAGAACTGATGTGAAGAAGAAACATAATCCTTTGAGAAGAGTT TGTAGTGCGAGCTCCGGTTTCTTCTCCTCCGACGAAGCATTCTCTGTGAAAATGCAGGAA TTAGCTTCACAATTCAGAAACGCAGGCGATGAAGAAGAAGAAGAGAACAAACAGAAATCA GAAGCAGTAGATAACGATAACGATAGCAATAATCATAGATTTGGTTCTTTGAAGCTATTA CAAGAGTCTGTTCCAGGTTTAGCTTCTTTGGAAGCTCCATGGGCAGAGATGGTTAACCAT TCAAGTATTGAGCGTAAAGCAAACAGTGTTGATTTACCTCTATCACTTAGGATAATAAAG AGGAAGTTACAAGAAGAAGCTCTTAAGAAAGCTAGTGCTACTACTTACTGTTCTATCAAT AGAGCTTTTTCTTCTATGGTTTTCATGATTGAGGAGCTTCATAGCTTTGCGTTGCAGACT AGAGTGGGTGTTCTTAAGCAGGTTAAGAAGGAAATGCACGCTTCATTGTTGTGGATTTTC CAACGTGTGTTCTCTCAGACACCTACTTTGATGGTTTATGTGATGATCCTTTTGGCGAAC TACACTGTGCATTCAGTTGCATCAAACCTACCTATTGCAGCATCTCCTCCAGTTGTTAAT AAAGGTCCGGATCAGACGCAACAAAGGATTGATTTTTCTTCGTTAAAGGAGTCTACGAAG CTTGATGGGTCCAAATGGTTAGGATCGATCAATTTTGACAAGGTTTCCCACTTGCCGAGA CATCGAGACTCGGTTTCAGGAGAAGGGATGAGAGAAGAGGAGGTGAGTCTGTGGAATTCG ATGGTGGAAGAAGCAGATCAAATGCAAGATTCCTCTGTTGATCGTGACATGAGATTGAGA CTTGTTTCACCGATCACTGCAAGGATTGAATTGGATGATTATGCCAATTACACTAGAACT GAGCTTTTATATAAGATAGGTTTGGCTCAAGAGCCTGACAATCATCTGCTCCTAGCTAAC TACGCTCAGTTCCTTTACCTCGTTACTCAAGACCATGAGAGAGCGGAGAACTGCTTCAAG AAAGCAATAGAGTCAGAAGATGTAGACGCAGAAACGTACAGCAAATACGCCATCTTCCTG TGGAAAGTTCGGAATGATCTCTGGGCTGCTGAGGAGAACTTTCTAGAAGCTATATCTGCA GACCCTACCAACTCCTTCTACGCCGCCAACTACGCCAATTTCCTCTGGAATACCGGTGGT GAAGAGACGTGTTTCCCTTTAGAAGATTCTACTCAGGAAATGGTTTGA

Peptide Sequence

PEP ID	AT3G47080.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17338415-17340129 REVERSE LENGTH=515 \| 201606
Sequence	MEVKVATTTSFHWSGRHTAIPQCPSFSQTLTSSKRRRSRGIAGDVSVGGGSLRLKPSTFL GTQSGKLHRSKSCELWQFSNSTTKKIRTDVKKKHNPLRRVCSASSGFFSSDEAFSVKMQE LASQFRNAGDEEEEENKQKSEAVDNDNDSNNHRFGSLKLLQESVPGLASLEAPWAEMVNH SSIERKANSVDLPLSLRIIKRKLQEEALKKASATTYCSINRAFSSMVFMIEELHSFALQT RVGVLKQVKKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASNLPIAASPPVVN KGPDQTQQRIDFSSLKESTKLDGSKWLGSINFDKVSHLPRHRDSVSGEGMREEEVSLWNS MVEEADQMQDSSVDRDMRLRLVSPITARIELDDYANYTRTELLYKIGLAQEPDNHLLLAN YAQFLYLVTQDHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAEENFLEAISA DPTNSFYAANYANFLWNTGGEETCFPLEDSTQEMV

Transcript Sequence

Transcript ID	AT3G47080.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:17338102-17340543 REVERSE LENGTH=2177 \| 201606
Sequence	CTCTACCCGTGGAATAAATAAATAAAACCAATCTCTTCTCTAAAATAGCACGCGCCTTTT CACCGCCTATATCCGGTAAATTAATTAAATAATTTACTAATTTTTCTCTCTTGGTATATA AACATACAAGGGCTTTTGTCTTCTTCTTCTTCTTCTTCTCTGTTTCTAACAAAGTTCAGG AGCTCTCGTAAGCCTCTGAATTCGATTTGACCTGACAACCATACAAAAAATTCTCCCGAG AAAATCTCTCTCTCAACGAACGAATTTCGAATCACCAAGAAGAAATTCTGAGATTTGTTT GCGTTTCATCGGAATAATGGAAGTGAAAGTAGCAACAACGACGTCGTTTCATTGGTCAGG ACGACACACAGCGATTCCTCAATGTCCGTCATTTTCGCAAACCCTAACTTCATCTAAACG CCGTCGTTCTCGTGGAATAGCCGGTGATGTTTCCGTCGGAGGAGGATCTTTGAGATTAAA ACCTTCGACGTTTCTCGGAACACAATCTGGGAAACTTCACCGATCTAAATCATGTGAGCT TTGGCAATTTTCTAATTCCACCACGAAGAAGATTAGAACTGATGTGAAGAAGAAACATAA TCCTTTGAGAAGAGTTTGTAGTGCGAGCTCCGGTTTCTTCTCCTCCGACGAAGCATTCTC TGTGAAAATGCAGGAATTAGCTTCACAATTCAGAAACGCAGGCGATGAAGAAGAAGAAGA GAACAAACAGAAATCAGAAGCAGTAGATAACGATAACGATAGCAATAATCATAGATTTGG TTCTTTGAAGCTATTACAAGAGTCTGTTCCAGGTTTAGCTTCTTTGGAAGCTCCATGGGC AGAGATGGTTAACCATTCAAGTATTGAGCGTAAAGCAAACAGTGTTGATTTACCTCTATC ACTTAGGATAATAAAGAGGAAGTTACAAGAAGAAGCTCTTAAGAAAGCTAGTGCTACTAC TTACTGTTCTATCAATAGAGCTTTTTCTTCTATGGTTTTCATGATTGAGGAGCTTCATAG CTTTGCGTTGCAGACTAGAGTGGGTGTTCTTAAGCAGGTTAAGAAGGAAATGCACGCTTC ATTGTTGTGGATTTTCCAACGTGTGTTCTCTCAGACACCTACTTTGATGGTTTATGTGAT GATCCTTTTGGCGAACTACACTGTGCATTCAGTTGCATCAAACCTACCTATTGCAGCATC TCCTCCAGTTGTTAATAAAGGTCCGGATCAGACGCAACAAAGGATTGATTTTTCTTCGTT AAAGGAGTCTACGAAGCTTGATGGGTCCAAATGGTTAGGATCGATCAATTTTGACAAGGT TTCCCACTTGCCGAGACATCGAGACTCGGTTTCAGGAGAAGGGATGAGAGAAGAGGAGGT GAGTCTGTGGAATTCGATGGTGGAAGAAGCAGATCAAATGCAAGATTCCTCTGTTGATCG TGACATGAGATTGAGACTTGTTTCACCGATCACTGCAAGGATTGAATTGGATGATTATGC CAATTACACTAGAACTGAGCTTTTATATAAGATAGGTTTGGCTCAAGAGCCTGACAATCA TCTGCTCCTAGCTAACTACGCTCAGTTCCTTTACCTCGTTACTCAAGACCATGAGAGAGC GGAGAACTGCTTCAAGAAAGCAATAGAGTCAGAAGATGTAGACGCAGAAACGTACAGCAA ATACGCCATCTTCCTGTGGAAAGTTCGGAATGATCTCTGGGCTGCTGAGGAGAACTTTCT AGAAGCTATATCTGCAGACCCTACCAACTCCTTCTACGCCGCCAACTACGCCAATTTCCT CTGGAATACCGGTGGTGAAGAGACGTGTTTCCCTTTAGAAGATTCTACTCAGGAAATGGT TTGAGAAGGAGCGAATGGCAGTGAATGGATGTTGGTTTGTTTGGAGTGAAGAGACAGCGA CACGGAACTTAGGTACACGATAGAAGCAAGAGGAAAAGTGTAAGTAGTGTTTTTGAGTGA ACCATTGCGGCTGATGAAACATTGCTTCTCTTTGGTTCTTTTTTCTTTTTGCTTTTGCCT AATTTTTCACTCAGTAGTATATACGGTCGCAGATTCCATCGAATAAGAACATGTGTAGAT CCAACACTATTACACGAATAATAAACACTGAGCATTGCTTTTGGTGAAATAATAAGTGCG CATATTTGAATCGTTTA