Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G46960.1
CDS Infomation	\| RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein \| Chr3:17291004-17298067 REVERSE LENGTH=4044 \| 201606
Sequence	ATGAACAAAGTCGAAGCAGGCAATGAGCTCGGCTTCCGGGTCGGATTCTCCGGTCATGGT GGTCACCTCCGCGTCGAGCCTTTTTACACGGCCGAGAGAGACGACGCACTGAACTCACTT CCCGATTTTGTATCCCCTCCTGCATTTGCCAAGGAAACAAAAGAATCAATAAAGAAACAT ATTGAGGAGAAGTATCTCATCCCGAGACTGGAACCGGATCAGTTTTCTGCTGAAAAAGCT GAGAATCAGTGGGATTTTGATTGGTTTTCCAGGGTGAAGATGCCCCTTCAACCCTCTTTG CCAAGGTCCGTTGTGGTTCCGACTTGGGAGTTGCCATTCAGGCGTCAAAAAGAGGATACT GAGAACGGAGCATGGGAGCCAAAATCAGTGGAGGTGGATTTGTCAGAACAAATGTATGGG GATCAAGATTCTGGATTTTTTCCACGAATGGTAGGACCTCCGAAGGATTTTCTGAGAGGA AGTGTCAACAATCGCCCTTTCCGTCCAGGTGGCTTGGAGGATTCACAGTCTTCAGAGAGA GTCCTTCCAGAGGGTGTCTCTAGTGGCCAATGGGTACAGGAATTGCTCAATGGGGGTCCT GCTCAAACTGTTCCTCCTAGTTTTAAGCAGAGTTTAGATCTTGGAGATCTGATGCCATAT CCCCAAACATGGAGCGTTTATGAGGATCATAGTTCACATGGCAATGCTTCAGATGAAAAT TCGAGCAAGTTGTCTATTCAGTTTGACGATCTGTTCAAGAAGGCATGGGAAGAAGATACT TTCTCTGAACTTGAGGGAGATGATCATACAGCTGGATCTGAGTCTCCAAAGGCGGAAGCT GAACCCGATGCTAAAGCGAGCATAAGCAATGAAGTCAGCAAAGGACTAGAGACTGACGTC ACTGTGCTGGATGAGATTTTGTCATCAGCAAAAACAGCAATAATGTCTGAAGAGGCAGTT ACTGGGAGCAGCGATAAACAACTACGGAAAGAGGGATGGGCCACTAAAGGAGATAGCCAA GACATTGCAGACCGGTTTTATGAGCTTGTTCCTGACATGGCGATTGAATTCCCTTTCGAA TTGGACAACTTTCAGAAGGAGGCTATCTGTTGTTTAGAAAAGGGAGAGTCTGTTTTTGTA GCAGCACATACATCGGCGGGGAAGACAGTTGTTGCAGAATATGCATTCGCTTTGGCCACC AAGCACTGTACACGAGCGGTTTATACTGCTCCAATTAAAACCATCAGCAACCAAAAATAC AGAGATTTTTGTGGGAAGTTTGATGTAGGACTTCTCACAGGTGATGTTAGCATAAGGCCA GAGGCATCTTGTCTGATCATGACAACTGAAATATTAAGGTCAATGCTTTATCGTGGTGCT GATATCATACGTGATATAGAATGGGTTATATTTGATGAAGTTCACTATGTCAATGACGTA GAGAGAGGGGTTGTTTGGGAAGAAGTCATCATCATGTTGCCAAGGCATATAAATTTTGTC CTCCTTTCTGCAACGGTGCCAAACACATTTGAATTTGCTGATTGGATTGGCCGAACAAAA CAAAAGGAGATACGTGTTACTGGCACGACAAAAAGACCAGTTCCCCTAGAGCATTGTCTT TTTTACTCTGGAGAACTCTACAAAGTTTGTGAGAACGAAGTTTTTCTTTCAAAAGGGATA AAGGATGCTAAAGATTCACAAAAGAAGAAGAATTCAAATGCAGTTAGTGTTGCACCTAAA CAACAAATGGGATCTTCAGCTCATCAAGATGGGAGCAAATCTCAGAAACATGAAGCTCAT TCTCGTGGCAAGCAGAATAAACACTCAAGTGTAAAAGATGTGGGAAAATCCTCTTACAGT GGTAACAGTCAGAACAATGGGGCATTTAGACGATCAGCAGCTTCAAATTGGTTACTGCTT ATCAACAAGCTTTCAAAAATGTCCCTATTACCTGTGGTTGTCTTCTGTTTCTCGAAGAAT TATTGTGATAGGTGTGCCGACGCCTTGACTGGGACCGACCTCACCAGTAGCTCTGAGAAA AGTGAAATCCGTGTCTTTTGCGATAAAGCGTTTTCAAGATTGAAAGGGTCTGATCGGAAT TTACCTCAGGTTCTCAGACTCCAAAGCTTACTTCATAGAGGAATTGGTGTTCATCATGCT GGGCTGCTTCCAATTGTAAAGGAAGTTGTTGAAATGCTTTTTTGCCGTGGTGTTATTAAG GTGCTATTTTCAACGGAGACATTTGCCATGGGGGTTAATGCTCCAGCTAGAACGGTCGTT TTTGATGCTTTGAGGAAGTTTGATGGCAAGGAATTTAGACAATTGCTTCCTGGAGAGTAC ACTCAAATGGCAGGACGTGCTGGCAGAAGAGGACTTGACAAAACGGGCACAGTTGTTGTC ATGTGTCGCGATGAAGTTCCAGATGAGAGTGATCTGAGGCGTGTAATTGTTGGAAGCGCA ACAAGACTAGAATCTCAGTTTCGACTAACCTACATAATGATCCTCCATCTTTTACGTGTT GAAGAATTAAAGGTGGAGGACATGCTGAAAAGAAGTTTTGCTGAATTTCATGCCCAGAAG AAACTACCCGAGAAACAACAGCTTCTCATGATAAAACGTTCTCTACCAACTAAACATATT GAATGTATTAAAGGTGAACCGGCAATTGAAGATTACTATGACATGTACATGGAAGCAAAT GAATATAACAACAAGATGTCGGAAGCGGTCATGCAGTCTCCTTATGCCCAGAGTTTTCTT GTACAAGGAAGAGTAGTGGTCATGAAATCTGGAATGGGCATAGACAATTTACTCGGAATC GTTCTGAAGGGACCTTCCAACACTAACAGACAATATGTTGTTTTGGTGATAAAATCTGAA ATACCGCCACCGGAGAAAAATATGGTCAGCATTGGCAAGAAAAGTTCAGATCCTTCTCAA GGTTATTTTATTGCGCCTAAATCAAAACGTGGTTTTGAAGAAGAATTTTATACAAAGCCG AGCTCTCGTAAAGGTCCCGTTGTAATAAAGATAGAGCTCCCGTACCATGGGGTTGCTGCT GGTGTAGGTTACGAGGTTAAAGGGTTTGATAACAAAGAATTTTTGTGCATATGCGATAGC AAGATAAAGATTGATCAGGTGCGCCTACTCGAGGATGGGAACAAGGCAGCTTTTTCTCAG ACGGTTCAACAGCTTCTGGATCTGAAATCAGACGGAAACAAATTTCCTCCTGCTCTAGAC CCAGTAAAAGATTTGAAGCTGAAAGATGCTGAGCTTGTGGAGACATACTATAAATGGACC AACCTATTGCAAAAGATGTCCATGAATAAGTGCCACGGTTGTGTCAAATTGGAAGAGCAC ATGAAGTTAGCTAGGGAGATTAAGAAGCATAAGACGGATCTCAAAGATCTTGAATTTCAA ATGTCTGATGAAGCCCTATTACAAATGCCTGCCTTTCAGGGCCGGATCGATGTTCTGAAG AACATTGGGTGTATAGATGATGACCTCGTCGTCCAAATCAAAGGTCGTGTCGCTTGCGAG ATGAATTCTGGGGAAGAATTGATTTGCACAGTGTGTCTGTTCGAGAATCAATTCGAAGAA TTAGAACCAGAAGAAGCAGTGGCTATAATGTCTGCCTTTGTCTTCCAACAGAAAAACACT TCAGCGCCTACACTAACTCCTAAGCTGGCTAAGGCTAAACAAAGACTCTATGATACAGCA ATCAGACTTGGTGAACTTCAAGCTCAGTACAATTTACAAATAGACCCTGAAGAATATGCT CAGGAGAATCTCAAATTTGGTCTGGTCGAAGTCGTCTATGAGTGGGCAAAGGGGACTCCA TTTGCAGAGATATGTGAACTGACAGATGTCCCGGAAGGTCTGATAGTTCGAACCATTGTG AGATTGGATGAGACATGCCGTGAATTCAAGAACGCAGCTGCCATTATGGGGAACTCGGCG TTACACAAGAAAATGGATGCAGCTTCAAATGCCATAAAACGTGACATCGTCTTTGCGGCT AGTCTGTATGTGACCGGAGTGTAA

Peptide Sequence

PEP ID	AT3G46960.1
PEP Infomation	\| RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein \| Chr3:17291004-17298067 REVERSE LENGTH=1347 \| 201606
Sequence	MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAERDDALNSLPDFVSPPAFAKETKESIKKH IEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKEDT ENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSER VLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVYEDHSSHGNASDEN SSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPDAKASISNEVSKGLETDV TVLDEILSSAKTAIMSEEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPDMAIEFPFE LDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKY RDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDV ERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCL FYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAH SRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKN YCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHA GLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEY TQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRV EELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEAN EYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKSE IPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPVVIKIELPYHGVAA GVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALD PVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQ MSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEE LEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYA QENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSA LHKKMDAASNAIKRDIVFAASLYVTGV

Transcript Sequence

Transcript ID	AT3G46960.1
Transcript Infomation	\| RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein \| Chr3:17290873-17298222 REVERSE LENGTH=4330 \| 201606
Sequence	GGCGTTGCGAATCCGCTGAACTCAACCGGAGGGAAATCTAATTGTTGTGTTCCTTCCTTT CACAGACCGATCGCTGATAAAGTCAGAATAGTTCGGAACAAGAGACGGCGAGAAAAGGGA ATGCGAAGAAGATAACGGTATAGAGAAAAGGCACTATGAACAAAGTCGAAGCAGGCAATG AGCTCGGCTTCCGGGTCGGATTCTCCGGTCATGGTGGTCACCTCCGCGTCGAGCCTTTTT ACACGGCCGAGAGAGACGACGCACTGAACTCACTTCCCGATTTTGTATCCCCTCCTGCAT TTGCCAAGGAAACAAAAGAATCAATAAAGAAACATATTGAGGAGAAGTATCTCATCCCGA GACTGGAACCGGATCAGTTTTCTGCTGAAAAAGCTGAGAATCAGTGGGATTTTGATTGGT TTTCCAGGGTGAAGATGCCCCTTCAACCCTCTTTGCCAAGGTCCGTTGTGGTTCCGACTT GGGAGTTGCCATTCAGGCGTCAAAAAGAGGATACTGAGAACGGAGCATGGGAGCCAAAAT CAGTGGAGGTGGATTTGTCAGAACAAATGTATGGGGATCAAGATTCTGGATTTTTTCCAC GAATGGTAGGACCTCCGAAGGATTTTCTGAGAGGAAGTGTCAACAATCGCCCTTTCCGTC CAGGTGGCTTGGAGGATTCACAGTCTTCAGAGAGAGTCCTTCCAGAGGGTGTCTCTAGTG GCCAATGGGTACAGGAATTGCTCAATGGGGGTCCTGCTCAAACTGTTCCTCCTAGTTTTA AGCAGAGTTTAGATCTTGGAGATCTGATGCCATATCCCCAAACATGGAGCGTTTATGAGG ATCATAGTTCACATGGCAATGCTTCAGATGAAAATTCGAGCAAGTTGTCTATTCAGTTTG ACGATCTGTTCAAGAAGGCATGGGAAGAAGATACTTTCTCTGAACTTGAGGGAGATGATC ATACAGCTGGATCTGAGTCTCCAAAGGCGGAAGCTGAACCCGATGCTAAAGCGAGCATAA GCAATGAAGTCAGCAAAGGACTAGAGACTGACGTCACTGTGCTGGATGAGATTTTGTCAT CAGCAAAAACAGCAATAATGTCTGAAGAGGCAGTTACTGGGAGCAGCGATAAACAACTAC GGAAAGAGGGATGGGCCACTAAAGGAGATAGCCAAGACATTGCAGACCGGTTTTATGAGC TTGTTCCTGACATGGCGATTGAATTCCCTTTCGAATTGGACAACTTTCAGAAGGAGGCTA TCTGTTGTTTAGAAAAGGGAGAGTCTGTTTTTGTAGCAGCACATACATCGGCGGGGAAGA CAGTTGTTGCAGAATATGCATTCGCTTTGGCCACCAAGCACTGTACACGAGCGGTTTATA CTGCTCCAATTAAAACCATCAGCAACCAAAAATACAGAGATTTTTGTGGGAAGTTTGATG TAGGACTTCTCACAGGTGATGTTAGCATAAGGCCAGAGGCATCTTGTCTGATCATGACAA CTGAAATATTAAGGTCAATGCTTTATCGTGGTGCTGATATCATACGTGATATAGAATGGG TTATATTTGATGAAGTTCACTATGTCAATGACGTAGAGAGAGGGGTTGTTTGGGAAGAAG TCATCATCATGTTGCCAAGGCATATAAATTTTGTCCTCCTTTCTGCAACGGTGCCAAACA CATTTGAATTTGCTGATTGGATTGGCCGAACAAAACAAAAGGAGATACGTGTTACTGGCA CGACAAAAAGACCAGTTCCCCTAGAGCATTGTCTTTTTTACTCTGGAGAACTCTACAAAG TTTGTGAGAACGAAGTTTTTCTTTCAAAAGGGATAAAGGATGCTAAAGATTCACAAAAGA AGAAGAATTCAAATGCAGTTAGTGTTGCACCTAAACAACAAATGGGATCTTCAGCTCATC AAGATGGGAGCAAATCTCAGAAACATGAAGCTCATTCTCGTGGCAAGCAGAATAAACACT CAAGTGTAAAAGATGTGGGAAAATCCTCTTACAGTGGTAACAGTCAGAACAATGGGGCAT TTAGACGATCAGCAGCTTCAAATTGGTTACTGCTTATCAACAAGCTTTCAAAAATGTCCC TATTACCTGTGGTTGTCTTCTGTTTCTCGAAGAATTATTGTGATAGGTGTGCCGACGCCT TGACTGGGACCGACCTCACCAGTAGCTCTGAGAAAAGTGAAATCCGTGTCTTTTGCGATA AAGCGTTTTCAAGATTGAAAGGGTCTGATCGGAATTTACCTCAGGTTCTCAGACTCCAAA GCTTACTTCATAGAGGAATTGGTGTTCATCATGCTGGGCTGCTTCCAATTGTAAAGGAAG TTGTTGAAATGCTTTTTTGCCGTGGTGTTATTAAGGTGCTATTTTCAACGGAGACATTTG CCATGGGGGTTAATGCTCCAGCTAGAACGGTCGTTTTTGATGCTTTGAGGAAGTTTGATG GCAAGGAATTTAGACAATTGCTTCCTGGAGAGTACACTCAAATGGCAGGACGTGCTGGCA GAAGAGGACTTGACAAAACGGGCACAGTTGTTGTCATGTGTCGCGATGAAGTTCCAGATG AGAGTGATCTGAGGCGTGTAATTGTTGGAAGCGCAACAAGACTAGAATCTCAGTTTCGAC TAACCTACATAATGATCCTCCATCTTTTACGTGTTGAAGAATTAAAGGTGGAGGACATGC TGAAAAGAAGTTTTGCTGAATTTCATGCCCAGAAGAAACTACCCGAGAAACAACAGCTTC TCATGATAAAACGTTCTCTACCAACTAAACATATTGAATGTATTAAAGGTGAACCGGCAA TTGAAGATTACTATGACATGTACATGGAAGCAAATGAATATAACAACAAGATGTCGGAAG CGGTCATGCAGTCTCCTTATGCCCAGAGTTTTCTTGTACAAGGAAGAGTAGTGGTCATGA AATCTGGAATGGGCATAGACAATTTACTCGGAATCGTTCTGAAGGGACCTTCCAACACTA ACAGACAATATGTTGTTTTGGTGATAAAATCTGAAATACCGCCACCGGAGAAAAATATGG TCAGCATTGGCAAGAAAAGTTCAGATCCTTCTCAAGGTTATTTTATTGCGCCTAAATCAA AACGTGGTTTTGAAGAAGAATTTTATACAAAGCCGAGCTCTCGTAAAGGTCCCGTTGTAA TAAAGATAGAGCTCCCGTACCATGGGGTTGCTGCTGGTGTAGGTTACGAGGTTAAAGGGT TTGATAACAAAGAATTTTTGTGCATATGCGATAGCAAGATAAAGATTGATCAGGTGCGCC TACTCGAGGATGGGAACAAGGCAGCTTTTTCTCAGACGGTTCAACAGCTTCTGGATCTGA AATCAGACGGAAACAAATTTCCTCCTGCTCTAGACCCAGTAAAAGATTTGAAGCTGAAAG ATGCTGAGCTTGTGGAGACATACTATAAATGGACCAACCTATTGCAAAAGATGTCCATGA ATAAGTGCCACGGTTGTGTCAAATTGGAAGAGCACATGAAGTTAGCTAGGGAGATTAAGA AGCATAAGACGGATCTCAAAGATCTTGAATTTCAAATGTCTGATGAAGCCCTATTACAAA TGCCTGCCTTTCAGGGCCGGATCGATGTTCTGAAGAACATTGGGTGTATAGATGATGACC TCGTCGTCCAAATCAAAGGTCGTGTCGCTTGCGAGATGAATTCTGGGGAAGAATTGATTT GCACAGTGTGTCTGTTCGAGAATCAATTCGAAGAATTAGAACCAGAAGAAGCAGTGGCTA TAATGTCTGCCTTTGTCTTCCAACAGAAAAACACTTCAGCGCCTACACTAACTCCTAAGC TGGCTAAGGCTAAACAAAGACTCTATGATACAGCAATCAGACTTGGTGAACTTCAAGCTC AGTACAATTTACAAATAGACCCTGAAGAATATGCTCAGGAGAATCTCAAATTTGGTCTGG TCGAAGTCGTCTATGAGTGGGCAAAGGGGACTCCATTTGCAGAGATATGTGAACTGACAG ATGTCCCGGAAGGTCTGATAGTTCGAACCATTGTGAGATTGGATGAGACATGCCGTGAAT TCAAGAACGCAGCTGCCATTATGGGGAACTCGGCGTTACACAAGAAAATGGATGCAGCTT CAAATGCCATAAAACGTGACATCGTCTTTGCGGCTAGTCTGTATGTGACCGGAGTGTAAG ATTTGATCACAATTCATACATTTGACCAGAGACGCTTCTCACTTAACTTGAAATTCAAAT CACTAAACATGTCCACAAATATAGTAGTTAAATTTTTCGTTACGACTATTACAGAAATGG ATTTCAGTTT