Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G46870.2
CDS Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:17263011-17264022 FORWARD LENGTH=810 | 201606
Sequence

ATGACAGCCATTCGCGTCTGCTCGCGAAAGTTCCCAACTTTCGCTTCGATTTTCTTCCAA
AACATTACAAGGAATCCGTCAATTCATCGAATTTCATTCTCGAATTTAAAACCCAAAACG
CTACTTCACCCAATTCCGCCGAAACCCTTCACTGTCTTTGTTTCTCGGTTCCATGACGGG
AGACCAAGAGGTCCTCTCTGGAGAGGTAAGAAACTGATCGGAAAAGAAGCCCTTTTCGTG
ATTCTGGGTCTCAAGAGATTGAAAGAAGACGACGAGAAGCTGGACAAGTTTATAAAAACC
CATGTTTTCAGATTGTTGAAATTAGACATGTTAGCTGTTATCGGTGAGCTTGAACGACAA
GAAGAGACTGCGTTAGCCATCAAGTGTTCGACGAAATGCCTGAACGGAGCTAACATTAGG
ATGTTTGAGGTGATCCAGAAACAAGAATGGTACCAACCTGATGTGTTTATGTACAAGGAC
CTTATAGTATCCTTAGCAAAGAGTAAAAGAATGGATGAAGCAATGGCGTTGTGGGAGAAA
ATGAAGAAAGAAAACCTCTTTCCTGATTCTCAGACTTATACTGAGGTTATCAGAGGATTT
CTTCGAGACGGATGTCCAGCTGATGCTATGAATGTGTATGAAGACATGTTGAAATCTCCA
GATCCGCCGGAAGAGTTGCCGTTTAGGGTTTTGTTGAAGGGGCTTCTGCCGCATCCGCTT
CTTAGAAACAAAGTGAAGAAGGATTTCGAAGAGTTGTTCCCTGAGAAACATGCTTATGAT
CCACCAGAAGAGATATTTGGTAGATGCTGA

Peptide Sequence

PEP ID

AT3G46870.2
PEP Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:17263011-17264022 FORWARD LENGTH=269 | 201606
Sequence

MTAIRVCSRKFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDG
RPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQ
EETALAIKCSTKCLNGANIRMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEK
MKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPL
LRNKVKKDFEELFPEKHAYDPPEEIFGRC

Transcript Sequence

Transcript ID

AT3G46870.2
Transcript Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:17262983-17264475 FORWARD LENGTH=1131 | 201606
Sequence

GACGATTCAAAGTTCACGCCTTTGAGAGATGACAGCCATTCGCGTCTGCTCGCGAAAGTT
CCCAACTTTCGCTTCGATTTTCTTCCAAAACATTACAAGGAATCCGTCAATTCATCGAAT
TTCATTCTCGAATTTAAAACCCAAAACGCTACTTCACCCAATTCCGCCGAAACCCTTCAC
TGTCTTTGTTTCTCGGTTCCATGACGGGAGACCAAGAGGTCCTCTCTGGAGAGGTAAGAA
ACTGATCGGAAAAGAAGCCCTTTTCGTGATTCTGGGTCTCAAGAGATTGAAAGAAGACGA
CGAGAAGCTGGACAAGTTTATAAAAACCCATGTTTTCAGATTGTTGAAATTAGACATGTT
AGCTGTTATCGGTGAGCTTGAACGACAAGAAGAGACTGCGTTAGCCATCAAGTGTTCGAC
GAAATGCCTGAACGGAGCTAACATTAGGATGTTTGAGGTGATCCAGAAACAAGAATGGTA
CCAACCTGATGTGTTTATGTACAAGGACCTTATAGTATCCTTAGCAAAGAGTAAAAGAAT
GGATGAAGCAATGGCGTTGTGGGAGAAAATGAAGAAAGAAAACCTCTTTCCTGATTCTCA
GACTTATACTGAGGTTATCAGAGGATTTCTTCGAGACGGATGTCCAGCTGATGCTATGAA
TGTGTATGAAGACATGTTGAAATCTCCAGATCCGCCGGAAGAGTTGCCGTTTAGGGTTTT
GTTGAAGGGGCTTCTGCCGCATCCGCTTCTTAGAAACAAAGTGAAGAAGGATTTCGAAGA
GTTGTTCCCTGAGAAACATGCTTATGATCCACCAGAAGAGATATTTGGTAGATGCTGAGG
GGAAGTCTATCTTGATCAAGATCCAGAATGTGTGATCCTGAAGAAGTATCAGTAGATCTG
AGCAAGTGGCGAAACAAAAGACTTAGTTAGTTAGACGAACCCAGATGATGTAGCGACTTC
TATTCCTTGTTATGATGCTTCATGATATTAGGCAGAGACCGAAATTTTGTGAATGCATCA
TCTTTATGAAGTGACTTCTATTCCTCGTTCTGATGCTTCATAATATTAGTCAAAGACCTA
ACTTTGTGAATCTATCATCTTTTGAGTAAAGAAGATTCTAAGTTGACAACT