Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G43610.2
CDS Infomation	\| Spc97 / Spc98 family of spindle pole body (SBP) component \| Chr3:15517772-15523927 REVERSE LENGTH=3627 \| 201606
Sequence	ATGCCGGTGCTGGCGACGAGTCTCGTTTCGCTTAAAGTGGAGGAGCCATACCTTCCTCCG CGAAATTGGGAATCTTTACCGTCTCAAAGCGGCCGATTTCTTCCTCCAACTCGTTCTTCT GCTTCTTCTTCTTCATCTTCTTCCTTTGTCTCTGAATCGAGCTTGGTCAGGTTGGCGCTG AATGCTCTGCAAGGAGTTGAGTCTTCTCTTATTAGTATAGAACAGCTCTCTTCTGCATTT TGTTCTGAGCCAGCTGACAGGACCTTCCACAAAATTCCGAGCTTGTGGCATCGGTTGTCA AGCACTGATGCGTTGGGACAGATTCTTAGAGATATAGGCTGCTTCGGTTCTTTGGTATTT CTTCTCCATAAGTTCGTTGACCATTTCACAAGATTGAATTTGGATGTGGAATCAGCTGTT GAGGGACAGGGGAGCTGTAAAATTGGTGAAAATGAAGAAGTCAATAACAAAAGCTGCTAT ACTCTTGTTAATCAGGCTTTTGCTATTGCTGTGAGGAGGGTCCTAGAAGGCTATATATCT GGGCTTGATACATTATGTGCATCGATAGAACTGAGGCGTTCATCAAACATTGTTGATGGG TCTGACCATGGTTCTTCTCGGTTAGGCAGCCTTACAAACGTCGTTCATCCAAAGATAACA TTATTGGAAGTTTTTCTGCATACTAGAGAGTTAAGAACACAGATTGAAGCTCTGGCAAAC ATATGTGATTTGTATGATATAGCCCTTTCTTACTGTGCCTCTCCTTGGGAATGTCTCATT ACTGAAGCAACCACGCGATTTCATGGGTTCTACAGAGGAAGTGACCTTCTTACTTACTTA TATTCACAACTACAGGTTGCTGATCCTACTCACAGTGCTATGCTGAAGTTTTTGTTCCTC AAAACATGTGAGCCATATTGTGAGTTTATAAGATCTTGGATGTTTAAAGCCGAACTTAAC GATCCTCACAAGGAGTTCATTGTGGAATGTCGCAGTGAGTCAACATCTTTTTCTTGGAAT AAGCCTGGCATCTCCCCATTGAAGAGCGTAAGGGAGCGAGGAGGGCTTGTTCCGTGTTTC TTAAACGGCTTCTTGGAACCTATAGTAAGGGCTGGTCAACAGCTTCAAGTAATTACAAAA CTTCTGGAACTGTGTAATCTTCCTGCGTCTGGACACAAAAATTACACAGATCTTCTTCCG TGTTGGACCTATTTTTCTACCACTAGTCCAGGGTACCCATCTCCAATAACTTTCAGCAAA TTACATATAGAAGTGATGATAAAGAAAAGAGACGATTACTACAGAATGATGCAAGAAAAA CTTGGTGACTTTTCAGAAAAGTTTGAAGTGTTCCCTGGGCAGGTTCCTGGAGCAATATCT TTACCAATCTCCTATGGCGACGGAGACAAAAATTCCATTTATTTCACACTGGATGAGAGT TTACTAATTCCTTCAACAATGGCAATAGACTTGACCAGGGACCAGAGTGGCTCTGATTCT GATGATCAGAATACAGAAGACAGATGGTTTTCAGAGATAGATGCATCATGCTCATCTGAA TGTTCATCGACTAGGGATTCTTTGGAAGCATCCGAGGTTGGACTCCTTGATTCACAAAGT ACATTAGTGGGACCTCCACCAAATTATTTATCAGCTCTACGTTTCTCTGTTGCCTCTAAT GGGAATTGTAATCAGAATCTGGTTCAGCATAGTGATTCAGGTTATATAGACAATAATCTT GTGAGGCAAGGTGAGAAGGCAGATATTAATCATCAGTGGGTGGATACTAAGCCAGAAGAG TCAACTGGAGTATGTGAAGATGATAAATTTAGGGGCCCTCTTTTGATTAAGTCATGGCCC CTTGGCGGATTACCTAGAAATCCATTTTGTGTTGATAAGAAGTCTGCAGACGATGACAGC GAAGATCCAAGAAATTATTCAGGAGCTAGGATGGAACAGAGGCACTTAATGAATACTGAT GAAAGAAAACTATTTTTAAACAACATTTCCACCAGTGGCAGCTGTTCAAAGCACGAGAGA AGACATGATGTGCTGGAAAACTGTCTTTCATCGAAATTAGATTTGATGAAAGACACAAAG GTAAACTACCCTAATGATGTCCTCAGTATGAATCCCTTAGTGAGATGTGATTTCTTGCGC AAGCATGGTAACACAAACAAGAGGAACCAGGGGAAATCATTGCCTTGGTTTGATTTTTCC GCGGTGGATGACCCTTCAAAAACATGTATTACCAGGATACCTGTACGAGTCCCTATTGAT TTTCAGAAAGAATCTCACAGTCCTCAGACTGATAGAAAGAGTCATCGCCATGCCAACCAA GAAAGGTTTGATGTTGAAGATCCTAAAGTTTCTTCCAGTCAGTTATCTTCTGGTATAAAA GGTTGCGCAGAAGAAAAAAAATCAAATGCATTTGGTGGAGGTAGATGGGAGAGTATGCTT CGTAGATCAAATAACCCTGAAACTAGTGCCTTTAGTGATCGCAGACAGGACTCCTCTGGC ACATTTGAATTGCCACTTGATTTTGTTATAGACAAGTGTCTACTGCAGGAAATACATCTT CAATATAACTTTGTCAGTAAGCTAGCTATCAAGTTGCTCGAAGAAGGATTTGGCTTGCAA GAACATCTGCTAGCTCTACGTAGATATCATTTCATGGAACTAGCAGACTGGGCAGATGTA TTTGTAGTGTCACTTTGGCATCATAAATGGCTTGTTACAGAGGCAGATAAGAGAATTGCA GAAATTCAAGGGTTTCTAGAATCATCAATTCAGAGATCATCATGTGAACGAGACATTTGT AAGGACAGGATATTTTTGTACAAAAGACAAGGCACAATGCATATCCCACCATCAACCATT GGAGTGCGTTCCTTTGATTTCCTAAGGTTGGGTTATCGAGTGGATTGGCCAATCAGTATA ATTTTAACATGCGATGCCCTGACAGCGTATGCTGATGTATTTAGTTTCCTGGTTCAAGTG AAACTAGCAGCCTACGTATTAACTGATGTCTGGTGTTCACTGAAGGATGTAAGACATATG ATGCATGAGAAGAAAGAGAAGATATTGAAGCAAGAACTCCGGTGGTTAAACATATTGATG AAACTAAGGCATCAGGTCAACCATTTTGTAACAGCACTACAGCAATATGTACATTCAGAA TTGTCTCACGTATCATGGTCCAAGTTCCTTCATTCCCTGAAAAATAAGGTCAAGGATATG ATGGATCTTGAATCTGTGCATATGGCTTATCTAAGTGAGGCTTTGCGCATCAGATGCTTC CTATCTGACGAAACCCAAATCATATCTAACATCATAGAGAACATCTTGCAATGCGCACTG GACTTCCGGTCTTGTCTTCCCAGAGGTATTCAGAGTACAGATCGAGTCCCAAACGATTCA TGGACAAAAACATTAGGCATAAACACATCTCAGGTGATGATGGTGAAGCAGAATTTTGAC AAAGAGTTAAAGGAGCTGCATAAGTGTCACCTGAGATCACCAAAACATGGGAAATATGGG CTCTCTCGCTTCTGGGACTACCTCAACTTCAACCTTTATTATTCAGATATCCTTCATGAC TCTAACATCTTCTCTCTTATTCCTTAG

Peptide Sequence

PEP ID	AT3G43610.2
PEP Infomation	\| Spc97 / Spc98 family of spindle pole body (SBP) component \| Chr3:15517772-15523927 REVERSE LENGTH=1208 \| 201606
Sequence	MPVLATSLVSLKVEEPYLPPRNWESLPSQSGRFLPPTRSSASSSSSSSFVSESSLVRLAL NALQGVESSLISIEQLSSAFCSEPADRTFHKIPSLWHRLSSTDALGQILRDIGCFGSLVF LLHKFVDHFTRLNLDVESAVEGQGSCKIGENEEVNNKSCYTLVNQAFAIAVRRVLEGYIS GLDTLCASIELRRSSNIVDGSDHGSSRLGSLTNVVHPKITLLEVFLHTRELRTQIEALAN ICDLYDIALSYCASPWECLITEATTRFHGFYRGSDLLTYLYSQLQVADPTHSAMLKFLFL KTCEPYCEFIRSWMFKAELNDPHKEFIVECRSESTSFSWNKPGISPLKSVRERGGLVPCF LNGFLEPIVRAGQQLQVITKLLELCNLPASGHKNYTDLLPCWTYFSTTSPGYPSPITFSK LHIEVMIKKRDDYYRMMQEKLGDFSEKFEVFPGQVPGAISLPISYGDGDKNSIYFTLDES LLIPSTMAIDLTRDQSGSDSDDQNTEDRWFSEIDASCSSECSSTRDSLEASEVGLLDSQS TLVGPPPNYLSALRFSVASNGNCNQNLVQHSDSGYIDNNLVRQGEKADINHQWVDTKPEE STGVCEDDKFRGPLLIKSWPLGGLPRNPFCVDKKSADDDSEDPRNYSGARMEQRHLMNTD ERKLFLNNISTSGSCSKHERRHDVLENCLSSKLDLMKDTKVNYPNDVLSMNPLVRCDFLR KHGNTNKRNQGKSLPWFDFSAVDDPSKTCITRIPVRVPIDFQKESHSPQTDRKSHRHANQ ERFDVEDPKVSSSQLSSGIKGCAEEKKSNAFGGGRWESMLRRSNNPETSAFSDRRQDSSG TFELPLDFVIDKCLLQEIHLQYNFVSKLAIKLLEEGFGLQEHLLALRRYHFMELADWADV FVVSLWHHKWLVTEADKRIAEIQGFLESSIQRSSCERDICKDRIFLYKRQGTMHIPPSTI GVRSFDFLRLGYRVDWPISIILTCDALTAYADVFSFLVQVKLAAYVLTDVWCSLKDVRHM MHEKKEKILKQELRWLNILMKLRHQVNHFVTALQQYVHSELSHVSWSKFLHSLKNKVKDM MDLESVHMAYLSEALRIRCFLSDETQIISNIIENILQCALDFRSCLPRGIQSTDRVPNDS WTKTLGINTSQVMMVKQNFDKELKELHKCHLRSPKHGKYGLSRFWDYLNFNLYYSDILHD SNIFSLIP

Transcript Sequence

Transcript ID	AT3G43610.2
Transcript Infomation	\| Spc97 / Spc98 family of spindle pole body (SBP) component \| Chr3:15517576-15524096 REVERSE LENGTH=3992 \| 201606
Sequence	TTTTTTTTTCCTCCTCCAGTGATCTCTCTGTGTGAGTAAAGCTCATCATCACCATTCTCA GCTTTTTGGCTTGTGGGAATGACGAAAGATCTCTCCTTTCTGGGATCCGAGAAGCAACTC GACGAAACCCTTTTCCGCTAAAACCATTCCAGTCAAGGCAGTAGTAATAATGCCGGTGCT GGCGACGAGTCTCGTTTCGCTTAAAGTGGAGGAGCCATACCTTCCTCCGCGAAATTGGGA ATCTTTACCGTCTCAAAGCGGCCGATTTCTTCCTCCAACTCGTTCTTCTGCTTCTTCTTC TTCATCTTCTTCCTTTGTCTCTGAATCGAGCTTGGTCAGGTTGGCGCTGAATGCTCTGCA AGGAGTTGAGTCTTCTCTTATTAGTATAGAACAGCTCTCTTCTGCATTTTGTTCTGAGCC AGCTGACAGGACCTTCCACAAAATTCCGAGCTTGTGGCATCGGTTGTCAAGCACTGATGC GTTGGGACAGATTCTTAGAGATATAGGCTGCTTCGGTTCTTTGGTATTTCTTCTCCATAA GTTCGTTGACCATTTCACAAGATTGAATTTGGATGTGGAATCAGCTGTTGAGGGACAGGG GAGCTGTAAAATTGGTGAAAATGAAGAAGTCAATAACAAAAGCTGCTATACTCTTGTTAA TCAGGCTTTTGCTATTGCTGTGAGGAGGGTCCTAGAAGGCTATATATCTGGGCTTGATAC ATTATGTGCATCGATAGAACTGAGGCGTTCATCAAACATTGTTGATGGGTCTGACCATGG TTCTTCTCGGTTAGGCAGCCTTACAAACGTCGTTCATCCAAAGATAACATTATTGGAAGT TTTTCTGCATACTAGAGAGTTAAGAACACAGATTGAAGCTCTGGCAAACATATGTGATTT GTATGATATAGCCCTTTCTTACTGTGCCTCTCCTTGGGAATGTCTCATTACTGAAGCAAC CACGCGATTTCATGGGTTCTACAGAGGAAGTGACCTTCTTACTTACTTATATTCACAACT ACAGGTTGCTGATCCTACTCACAGTGCTATGCTGAAGTTTTTGTTCCTCAAAACATGTGA GCCATATTGTGAGTTTATAAGATCTTGGATGTTTAAAGCCGAACTTAACGATCCTCACAA GGAGTTCATTGTGGAATGTCGCAGTGAGTCAACATCTTTTTCTTGGAATAAGCCTGGCAT CTCCCCATTGAAGAGCGTAAGGGAGCGAGGAGGGCTTGTTCCGTGTTTCTTAAACGGCTT CTTGGAACCTATAGTAAGGGCTGGTCAACAGCTTCAAGTAATTACAAAACTTCTGGAACT GTGTAATCTTCCTGCGTCTGGACACAAAAATTACACAGATCTTCTTCCGTGTTGGACCTA TTTTTCTACCACTAGTCCAGGGTACCCATCTCCAATAACTTTCAGCAAATTACATATAGA AGTGATGATAAAGAAAAGAGACGATTACTACAGAATGATGCAAGAAAAACTTGGTGACTT TTCAGAAAAGTTTGAAGTGTTCCCTGGGCAGGTTCCTGGAGCAATATCTTTACCAATCTC CTATGGCGACGGAGACAAAAATTCCATTTATTTCACACTGGATGAGAGTTTACTAATTCC TTCAACAATGGCAATAGACTTGACCAGGGACCAGAGTGGCTCTGATTCTGATGATCAGAA TACAGAAGACAGATGGTTTTCAGAGATAGATGCATCATGCTCATCTGAATGTTCATCGAC TAGGGATTCTTTGGAAGCATCCGAGGTTGGACTCCTTGATTCACAAAGTACATTAGTGGG ACCTCCACCAAATTATTTATCAGCTCTACGTTTCTCTGTTGCCTCTAATGGGAATTGTAA TCAGAATCTGGTTCAGCATAGTGATTCAGGTTATATAGACAATAATCTTGTGAGGCAAGG TGAGAAGGCAGATATTAATCATCAGTGGGTGGATACTAAGCCAGAAGAGTCAACTGGAGT ATGTGAAGATGATAAATTTAGGGGCCCTCTTTTGATTAAGTCATGGCCCCTTGGCGGATT ACCTAGAAATCCATTTTGTGTTGATAAGAAGTCTGCAGACGATGACAGCGAAGATCCAAG AAATTATTCAGGAGCTAGGATGGAACAGAGGCACTTAATGAATACTGATGAAAGAAAACT ATTTTTAAACAACATTTCCACCAGTGGCAGCTGTTCAAAGCACGAGAGAAGACATGATGT GCTGGAAAACTGTCTTTCATCGAAATTAGATTTGATGAAAGACACAAAGGTAAACTACCC TAATGATGTCCTCAGTATGAATCCCTTAGTGAGATGTGATTTCTTGCGCAAGCATGGTAA CACAAACAAGAGGAACCAGGGGAAATCATTGCCTTGGTTTGATTTTTCCGCGGTGGATGA CCCTTCAAAAACATGTATTACCAGGATACCTGTACGAGTCCCTATTGATTTTCAGAAAGA ATCTCACAGTCCTCAGACTGATAGAAAGAGTCATCGCCATGCCAACCAAGAAAGGTTTGA TGTTGAAGATCCTAAAGTTTCTTCCAGTCAGTTATCTTCTGGTATAAAAGGTTGCGCAGA AGAAAAAAAATCAAATGCATTTGGTGGAGGTAGATGGGAGAGTATGCTTCGTAGATCAAA TAACCCTGAAACTAGTGCCTTTAGTGATCGCAGACAGGACTCCTCTGGCACATTTGAATT GCCACTTGATTTTGTTATAGACAAGTGTCTACTGCAGGAAATACATCTTCAATATAACTT TGTCAGTAAGCTAGCTATCAAGTTGCTCGAAGAAGGATTTGGCTTGCAAGAACATCTGCT AGCTCTACGTAGATATCATTTCATGGAACTAGCAGACTGGGCAGATGTATTTGTAGTGTC ACTTTGGCATCATAAATGGCTTGTTACAGAGGCAGATAAGAGAATTGCAGAAATTCAAGG GTTTCTAGAATCATCAATTCAGAGATCATCATGTGAACGAGACATTTGTAAGGACAGGAT ATTTTTGTACAAAAGACAAGGCACAATGCATATCCCACCATCAACCATTGGAGTGCGTTC CTTTGATTTCCTAAGGTTGGGTTATCGAGTGGATTGGCCAATCAGTATAATTTTAACATG CGATGCCCTGACAGCGTATGCTGATGTATTTAGTTTCCTGGTTCAAGTGAAACTAGCAGC CTACGTATTAACTGATGTCTGGTGTTCACTGAAGGATGTAAGACATATGATGCATGAGAA GAAAGAGAAGATATTGAAGCAAGAACTCCGGTGGTTAAACATATTGATGAAACTAAGGCA TCAGGTCAACCATTTTGTAACAGCACTACAGCAATATGTACATTCAGAATTGTCTCACGT ATCATGGTCCAAGTTCCTTCATTCCCTGAAAAATAAGGTCAAGGATATGATGGATCTTGA ATCTGTGCATATGGCTTATCTAAGTGAGGCTTTGCGCATCAGATGCTTCCTATCTGACGA AACCCAAATCATATCTAACATCATAGAGAACATCTTGCAATGCGCACTGGACTTCCGGTC TTGTCTTCCCAGAGGTATTCAGAGTACAGATCGAGTCCCAAACGATTCATGGACAAAAAC ATTAGGCATAAACACATCTCAGGTGATGATGGTGAAGCAGAATTTTGACAAAGAGTTAAA GGAGCTGCATAAGTGTCACCTGAGATCACCAAAACATGGGAAATATGGGCTCTCTCGCTT CTGGGACTACCTCAACTTCAACCTTTATTATTCAGATATCCTTCATGACTCTAACATCTT CTCTCTTATTCCTTAGAAGTCATTATATGATATACTCTTATGTGTGTGTTGTATATTTTT GTGTTATATGTTTCACTTCCATATATTATTGCGGTACAGTTTTCACACAAATAATTGAGC TGTCTTTATTGATCCTTTTCCTCTATCACTCTCTTATTAAAATAGTCTTCTTTTTGCAAC TAGACATGTTATTATATTATATTTTTGTGGGC