Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G27700.1
CDS Infomation	\| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein \| Chr3:10257681-10261330 REVERSE LENGTH=2727 \| 201606
Sequence	ATGGAACTTTCTGTTTCCTCTCCAAAGCAAAGTGTGTTATCTCCACCTGATTGTATGAGT GACCCTGAGGAGGAGCATGAGATCAGTGAGGAGGAGGATGATGATCGCAACCATAAGCAC CGTAGGAAAGAAGAGACCAGGTCTCAGTCTTTGGAACAAGATTCTTCAGATCAGGCTTTC TCACGGCCGTACAGGAAAAACTATAGACATTATGAAAATGGCAATTCGTTTAGTGAACAT GAAAAGCGGTCTTTTGGGACTGGATCAGGGCAACGTGTACAGTTTGATAACCAAAGAATG AGGTCAAACCCAATGTTTTCAAGGGACTCTGGTCCTGGTAGAGGTAGAGGAAACTATGGT TCTTGGGCCCAGCGTGATTCCAGGTTTAATCCTGTTGATCTCTCATCTCATATGGTTCAA GTCGGGTCTATGGGCCAGGGTATGTTTGGAGGAAGGGGACTAGCTGGTGTTTCAGCTGCT CAAAGTGCACCATGGCCTCCTTTTGGAATGATTCCTGGAGTTCCTAATGGTGGCTTGGAT GGTTTCCATCACTTACAAGGGTCCCTTAGACCGCCCTTAAATGCGCCACTTAACATGGGT ATTCCTCGGCAACGATGCAGAGACTTTGAGGAACGTGGTTTCTGCCTCAGAGGGGACATG TGTCCAATGGAGCATGGAATGAATCGTATTGTTGTTGACGATGTTCAGAGTCTATCACAG TTTAACCTTCCCGTTTCAGTCCCTGGTGCACCTCATCTGGCAGCTTCTTCTAAACAAGTG CCCGCTCAGTTTGGGGGTGCCAGTTTCATGAATCCTAAAGGAGCTCATGGGAGGACTAAC GAGGGGGGAATGGCTGTTGATGGTTTGGGTTATGGGGATGCATATCCTAGTGCTGGTGGA ACTGACTTTTACGATCCTGATCAACCTTTGTGGAATAATAGTACTGGTGAAACTTCAGGT GCAATATCTACACTCAATTCTCATGGGGTTGATGAGAATGTGGCTCCACTGGATGACAGT AACCAAGACGCCGCTGAAAATGGGTGTGGTATTAGAGACTCTAGAAGCACAAGTCAATCA GTTTGGGGAAGAATGAAAGGTTCTAATAGTCAAGCAAATTCCAAAGAGAAAGCTGATGCA GTATTAAATTCATCAGCTGTTCCTGAAGATCAATTGAAGGAGGTCTCAGTTAATTCATCT CGACACGGTAAACAAAACCATGTTGGTGAAAGTGTCGCAAAAGTTGTTGATTCATCGAAT ATTTCAAATGATATGATGAACAATACAAGGAAACCAACTCAAAAGGCAATGCGGACTCTA TTTGTGAATTATGTTCCACACGAGAGCAACAGAAGGGACCTCATTCTTGCCCATTTTCAG AAATTTGGGAAAGTTATTGACATTCACATCCCAGTAAATAGTGAGAGAGCATTTGTGCAG TTCTCAAAACGTGAAGAGGCTGAATCTGCCCTCAGGGCACCTGATGCTGTGATGGGTAAC CGCTTCATCAAACTTTGGTGGGCAAATAGAGATAGTATACCTGATAATGGCCTGTCCACT GGCAGTGGTGCTTCTATGAAGGGTCGTAGTATGACTGCTTCTGGAGCACAGAACCAATTT CCTATTGCTGCTGCATCGAAAAGCAACCATGTATCTTCAATTGCTAAGGTCCCTACCTTC CAAACTGGTGGAGCTCCATCCTCCTCTGAACAGCCTAAGCCTGTGGTGGTGACCACCAGT GGTCCCAAGGTTACGCCGCTTCAGCAGAAAAAAGCAGACACTCTTGAGCGGTTGAAGGAG ACTCTTCGTAAAAAACAGGAAATGCTGGAGCAGAAGCGTAACGAGTACCGCAAAAAATTG GCTACACTTGAAAAACAAGGTACTGTTGTCAAGAGGGAGGAAGCAGATGAGCCAGATGCT AAGCGTGTTAAACTAGACACAGCCTCTGATTCGGGAGCTGCAATTGCATCACCAAAAACA GAGTCATCGACAGATAAGAAAGTGCCTATCCTGAAACCACTTTCCACCGCCAAACTAAGC ACAGAAACGCCATCACCCGATTCAAAAAACTTTAAGCAAAGACCATATTCGTTTACCACA AGTTTGAACGCTCCTATGGTAAATAGGTATAAGTTGGATAACCGCACCACGACCATCAAA GTGGTTCCTCCTTTGCCAACTGGGTTAGCTGATGTTGCTGTCGTAAAGGAACATTTTTCA TCTTACGGCGAAGTCTCAAAAGTGGAACTGGAAGACAATGCATCGATTGATAGTGGCAAG GATCATGAAACACAGAACGAAAGCCGTGCAGCTTGTGTCACATTTGTGAAACGCAGCGCA GCAGAGAAAGCGTTTGCTAATGCAAAGTGTTGGCAAGAACACACGTTGCAGCTCGTGTGG GTAACACGTCAAAGCAACAGAGAGAGCAACAATAACAATAACAATAGTAATAGTCTCTCT GTTTCTCGTGACAACCTTAGCAGCAAAAACAAGTGCGCTTCTGTCTCTAATGACCCAAAA CCAGCAGTTGAAGTCAAGACCTCCTCTACGGAAGAACCAGAGAATACAAATGTTTCTGGA GACAACGACAGTACTTTGGATAAACAAGAGACCAAAGAAAGCGACAATGATAACAATAAA AGTAACCACGAGTCCATCGAAGGAGCTTCTGAGGTGATTGCAACTGCAGGAACTGATGAA GAACAATCTGAACAAATTCATCAGTGA

Peptide Sequence

PEP ID	AT3G27700.1
PEP Infomation	\| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein \| Chr3:10257681-10261330 REVERSE LENGTH=908 \| 201606
Sequence	MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF SRPYRKNYRHYENGNSFSEHEKRSFGTGSGQRVQFDNQRMRSNPMFSRDSGPGRGRGNYG SWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGLAGVSAAQSAPWPPFGMIPGVPNGGLD GFHHLQGSLRPPLNAPLNMGIPRQRCRDFEERGFCLRGDMCPMEHGMNRIVVDDVQSLSQ FNLPVSVPGAPHLAASSKQVPAQFGGASFMNPKGAHGRTNEGGMAVDGLGYGDAYPSAGG TDFYDPDQPLWNNSTGETSGAISTLNSHGVDENVAPLDDSNQDAAENGCGIRDSRSTSQS VWGRMKGSNSQANSKEKADAVLNSSAVPEDQLKEVSVNSSRHGKQNHVGESVAKVVDSSN ISNDMMNNTRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQ FSKREEAESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQF PIAAASKSNHVSSIAKVPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKE TLRKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKT ESSTDKKVPILKPLSTAKLSTETPSPDSKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTIK VVPPLPTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDHETQNESRAACVTFVKRSA AEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRDNLSSKNKCASVSNDPK PAVEVKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEVIATAGTDE EQSEQIHQ

Transcript Sequence

Transcript ID	AT3G27700.1
Transcript Infomation	\| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein \| Chr3:10256895-10261975 REVERSE LENGTH=3912 \| 201606
Sequence	CTTCCTCGCCTTTCCTTGTGTTACTTGCAATAACAAATAAGCCCCTCTTTCTCTCTCTAC CCTCTCTCTCTCTTTCTCAGCTATTCCACAGCTCCATCAAACCCTAACGACGAGACCAGT CGCTATCGGCGACGTTGATTCTCCTACTAATTCCGAAACCTCGACGGCGCGGCCAAAAAT CTCCGCCGTGGATTCAATCTTCATTGACGATTCCTCCAATTTTGTCCAATTTCTTCCCCA AATGTTCCATCCATTGTTTTTTATTTAGGTTTTCGTCGTCGTCGGAGCCGAAACCGATTT TGTTTGTCTGTGAAGAGGAGCGAACAGAGTCACTGATTATTCCAAGAGAACCTAGTTTTG TATGAGAGACAAGAAGCTCTGCAATATTGAAGTGGTTTCATGGAACTTTCTGTTTCCTCT CCAAAGCAAAGTGTGTTATCTCCACCTGATTGTATGAGTGACCCTGAGGAGGAGCATGAG ATCAGTGAGGAGGAGGATGATGATCGCAACCATAAGCACCGTAGGAAAGAAGAGACCAGG TCTCAGTCTTTGGAACAAGATTCTTCAGATCAGGCTTTCTCACGGCCGTACAGGAAAAAC TATAGACATTATGAAAATGGCAATTCGTTTAGTGAACATGAAAAGCGGTCTTTTGGGACT GGATCAGGGCAACGTGTACAGTTTGATAACCAAAGAATGAGGTCAAACCCAATGTTTTCA AGGGACTCTGGTCCTGGTAGAGGTAGAGGAAACTATGGTTCTTGGGCCCAGCGTGATTCC AGGTTTAATCCTGTTGATCTCTCATCTCATATGGTTCAAGTCGGGTCTATGGGCCAGGGT ATGTTTGGAGGAAGGGGACTAGCTGGTGTTTCAGCTGCTCAAAGTGCACCATGGCCTCCT TTTGGAATGATTCCTGGAGTTCCTAATGGTGGCTTGGATGGTTTCCATCACTTACAAGGG TCCCTTAGACCGCCCTTAAATGCGCCACTTAACATGGGTATTCCTCGGCAACGATGCAGA GACTTTGAGGAACGTGGTTTCTGCCTCAGAGGGGACATGTGTCCAATGGAGCATGGAATG AATCGTATTGTTGTTGACGATGTTCAGAGTCTATCACAGTTTAACCTTCCCGTTTCAGTC CCTGGTGCACCTCATCTGGCAGCTTCTTCTAAACAAGTGCCCGCTCAGTTTGGGGGTGCC AGTTTCATGAATCCTAAAGGAGCTCATGGGAGGACTAACGAGGGGGGAATGGCTGTTGAT GGTTTGGGTTATGGGGATGCATATCCTAGTGCTGGTGGAACTGACTTTTACGATCCTGAT CAACCTTTGTGGAATAATAGTACTGGTGAAACTTCAGGTGCAATATCTACACTCAATTCT CATGGGGTTGATGAGAATGTGGCTCCACTGGATGACAGTAACCAAGACGCCGCTGAAAAT GGGTGTGGTATTAGAGACTCTAGAAGCACAAGTCAATCAGTTTGGGGAAGAATGAAAGGT TCTAATAGTCAAGCAAATTCCAAAGAGAAAGCTGATGCAGTATTAAATTCATCAGCTGTT CCTGAAGATCAATTGAAGGAGGTCTCAGTTAATTCATCTCGACACGGTAAACAAAACCAT GTTGGTGAAAGTGTCGCAAAAGTTGTTGATTCATCGAATATTTCAAATGATATGATGAAC AATACAAGGAAACCAACTCAAAAGGCAATGCGGACTCTATTTGTGAATTATGTTCCACAC GAGAGCAACAGAAGGGACCTCATTCTTGCCCATTTTCAGAAATTTGGGAAAGTTATTGAC ATTCACATCCCAGTAAATAGTGAGAGAGCATTTGTGCAGTTCTCAAAACGTGAAGAGGCT GAATCTGCCCTCAGGGCACCTGATGCTGTGATGGGTAACCGCTTCATCAAACTTTGGTGG GCAAATAGAGATAGTATACCTGATAATGGCCTGTCCACTGGCAGTGGTGCTTCTATGAAG GGTCGTAGTATGACTGCTTCTGGAGCACAGAACCAATTTCCTATTGCTGCTGCATCGAAA AGCAACCATGTATCTTCAATTGCTAAGGTCCCTACCTTCCAAACTGGTGGAGCTCCATCC TCCTCTGAACAGCCTAAGCCTGTGGTGGTGACCACCAGTGGTCCCAAGGTTACGCCGCTT CAGCAGAAAAAAGCAGACACTCTTGAGCGGTTGAAGGAGACTCTTCGTAAAAAACAGGAA ATGCTGGAGCAGAAGCGTAACGAGTACCGCAAAAAATTGGCTACACTTGAAAAACAAGGT ACTGTTGTCAAGAGGGAGGAAGCAGATGAGCCAGATGCTAAGCGTGTTAAACTAGACACA GCCTCTGATTCGGGAGCTGCAATTGCATCACCAAAAACAGAGTCATCGACAGATAAGAAA GTGCCTATCCTGAAACCACTTTCCACCGCCAAACTAAGCACAGAAACGCCATCACCCGAT TCAAAAAACTTTAAGCAAAGACCATATTCGTTTACCACAAGTTTGAACGCTCCTATGGTA AATAGGTATAAGTTGGATAACCGCACCACGACCATCAAAGTGGTTCCTCCTTTGCCAACT GGGTTAGCTGATGTTGCTGTCGTAAAGGAACATTTTTCATCTTACGGCGAAGTCTCAAAA GTGGAACTGGAAGACAATGCATCGATTGATAGTGGCAAGGATCATGAAACACAGAACGAA AGCCGTGCAGCTTGTGTCACATTTGTGAAACGCAGCGCAGCAGAGAAAGCGTTTGCTAAT GCAAAGTGTTGGCAAGAACACACGTTGCAGCTCGTGTGGGTAACACGTCAAAGCAACAGA GAGAGCAACAATAACAATAACAATAGTAATAGTCTCTCTGTTTCTCGTGACAACCTTAGC AGCAAAAACAAGTGCGCTTCTGTCTCTAATGACCCAAAACCAGCAGTTGAAGTCAAGACC TCCTCTACGGAAGAACCAGAGAATACAAATGTTTCTGGAGACAACGACAGTACTTTGGAT AAACAAGAGACCAAAGAAAGCGACAATGATAACAATAAAAGTAACCACGAGTCCATCGAA GGAGCTTCTGAGGTGATTGCAACTGCAGGAACTGATGAAGAACAATCTGAACAAATTCAT CAGTGAGGTAATATTTTTGTCTCAGAAACATATCTTTTGAGCTTGGATCTGGTATTTTAG TGATCTTTTTCTCCGACTTAGGCTTTTAAGCCAATTCGTGAGACGTTAATATTTGTTGGT AGCAAAAGATATATACATATCTAAGTATTTTGTTTTCCTTTTTTCGATAGTAGAATGTGA AAAAGAAAAGAGAAGACAAAAAAAAAAAAAAAGAAGTGTATTGTTACATTTGGCCTTCCA AGAACATTTGGTTGGGTCTTTGTACCAGCAGATCTTTGTTCCTTTTTTTCAGTCATTAGC TGCTATAATTATTTCAATTTCTGTTGTAAATAGTCTGGACATTTTGATTCCTTGTCATTT AGAAAAAAAATTGTGGAATCCAGAATCGGAAGCCATTTTGAAAGTTTATGCAGTGTTTTG GTAGACTTGTATTATTTTTTCCCTAGATTTAGAATCTTGCAACTACATTGTTTTTTCATT CAGTTTTAGCATAGGGACAGTTGTAGATAAACAAACATTTGTAATTCAATGTCTCTCAAC TATTGAATTTGGAAACTTAAGCACGTTTATAACTGCCTTGTAATTCAGTGTCTTATGTTT CGAATGTCTTAGCCTTTTAAACGTACTGCCAAGTTGCTAGCAAACGAGAATTCTAACCAA AGCAAAAAAAAAAAAAATGGAACCGATGTATCAAATATAGGGATAACTTTAATGCATTGA TAAATGTTTAAAAGATATAATTTACATAAATTATCCGATCAAACTCTATTTTCCGGGGAC GAAGTTGGTGGC