Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G27330.1
CDS Infomation	\| zinc finger (C3HC4-type RING finger) family protein \| Chr3:10116950-10120516 REVERSE LENGTH=2742 \| 201606
Sequence	ATGAAAGTTCGTAGGAAACTTGGTGGTGGTTGCGGCGGAGACGTCGTTGTTTCATGGCGG ACGTTCTTTTGGTTCGTGATTCTGTTTGTCTTCTCCTTCGTTCTCTTCTCCACCATGTTT ATTTTTAAGGGGAAGTTTCGTCCGGTGGTTCGTTCGACGATAAGCTTCTCAACGGCTGTT ACGGCAAGGGCGGTTTTCCGTGAGTCTATATCGTCTTCTCCGGCGGTTACGATTCGTGAA GCGGTGAAATTACCTGAACAAACTCTGGTTTTCCTAAAATACCCTCAGTCTCGTCGGTTA TTTACAAAAGACGATCTCATTTGCGTTTTCTCCGGTTCGTCGAAGCTACGGAAAGTGTAT CCGACGGCTGTGGACAGAGACAAATTTGGAGGTCAGATCGTACGGTGTCCTGAGACGCCA CGTGGCTACACCATTTCGCTTGCCGTTTCGAGATGGACGACCGATGATCATCTCCCGGCT GGACCAACTCACCGGTATGATTGGCTGGTTTACGACGCCGTGATCGACTACGATAACTCT ACGGTGGTTTTTGTCAAGGGGCTTAATCTACGGCCAGGAAGAGTTGCTGACGTGTCGAGA TATGAGTGCGTGTACGGTTGGGATTTCGCGAAACATAATCGGTTAATAAGATCAGATGTC ATCACTGCGGCTCAGGAGATCGTACGGTGTAGAACACCGTTAGCTGTGTTAGACGGCCCA AAAGCGGCCCGTGGGCCTGTTAAAGTCTCGGTTAGAATCAAAGGAGGAACCGGAATGCTT CCTTCTATCGCTCAGCCGGTTCGGATCATTAACCCGCCGCGAAAGAAACCCTTTCAAATG TGCGTTTGCACCATGACCCGAAACGCAGCCGCGGTTTTGAGAGAGTGGGTGATGTATCAC GCCGGAATTGGCGTTCAACGGTGGTTCATCTATGACAACAACAGCGACGACGATATCATC GCCGAGATCGAGAATCTCGAAAGACGTGGTTACAACATCTCTAGACATTTCTGGCCGTGG ATTAAAACTCAGGAAGCCGGATTCTCTAATTGCGCGATCCGTGCAAAGAGCGATTGCGAT TGGATTGCGTTTATCGACGTCGACGAGTTCTTCTACATCCCATCCGGTGAAACTCTAACT TCCGTCATCAGAAATTACACAACCACCGACTCAATCGGTGAAATTCGAACACCTTGCCAC AGTTTCGGGCCATCGGGTTTGAGATCTCGGCCTCGGAGTGGAGTCACGTCGGGATACACT TGCCGTGTGGTGTTACCGGAGAGACACAAGAGCATAATCCGGCCGGAAGCGATGAACGCG ACGCTGATAAACGTTGTTCACCATTTTCACCTCAGAGATGGATTCACGTTTGCTGACATG GATAAGGATATAATGGTAATCAACCACTACAAGTATCAGGTGTGGGAGGTTTTCAAAGAG AAGTTTTATCGGCGAGTCGCGACGTACGTAGCGGATTGGCAAAACGAAGAGAATGTCGGG TCAAGAGATCGAGCACCCGGTTTAGGAACCCGACCCGTTGAACCATCTGATTGGGCTGAG AGATTCTGTGAGGTTAATGATACGGGGCTTAGAGATCAAGTGTTTGAGAAGTTCAAAGAC AAAAAAACGCAGCGTTTAGTTTGGGAAAAAGCGGAAGAAGACGACAATATCCAGAGAATG GTGAGTGAAACACCATTGAGAGTTACTAATCGATCTGGAGATGGATCAAATGGATCAAAG GAAGTATCGATCGCGAGAGAGAAGAATGGTGAAAACGCAGAGATATTCATCAGCCCGAGA TTCAAATCAGCGGCGGCTATGGCGGGTTGGGACGAAGAAGATCTGATAATCGCTAGCTTT GTGGTAGATGATACTCCTGAAAGAAGTTCTTCAAAGCGAAGGAGACGTTCCAATTTGTTG TTTAAATCAACCCCACCTTCTGGTTCTTCAAGAAGGAATCAGCGTGTTAAGCAAAGTCTT GTTCCGTTACCTGTTATTGATCTTGATAAAGTAATCAGACATGAAGAAGAAAAATCTGCA GAGAAGAAGAAAAAGAAGAGAGAGATGGAAACAGAAACAAAAGAAGAGAAGAAAATAGAT AAAGATGAGAAGAGTTTGTCAGATCATGTTGTGCTTCCTTGCATAGATAAGCTTCGAGAT GAATTGTCTTGCGCGATTTGTCTTGAGATTTGCTTTGAACCTAGTACTACAACTTGTGGA CACAGCTTCTGCAAAAAGTGTTTGCGATCTGCGGCGGATAAGTGTGGAAGGAAATGCCCT AAATGCAGGCAACTAATAGGAAATGGAAGATATTGTACTGTCAATACGGTTCTTTGGAAC ACAATCCAGCTTTTGTTCCCTAAAGAAGTCGAAGCACAGAGAGCTGCTTCTGCTAACTTG AAAGGCAAGGAGACACCGAGTCCTAGAAATCCGAATCAAAGGCTAAGAAGCAGAAACAGG GAAACTGCATTGTTTCAAGAGAGGTTACAAAGAGAGGATATTTCGAGATTGCTTGTATCT GAAGAGAGAAGTGAGAGGAGCGAAAGAAGGAGGAGAAGTACAAGTATGAGGTTGGATCAA AATAGGGATGCAGCATTAGCGATGCGGTTACAGCGACAGGAGTTCGCATCAGCTTTTGGC GCAACGACGGCTGAAACTTCTTCTTCATCGGTTTCTACTCTGTCGCGAGCAAGAGCTAAC CTGCAAGCTATGGCGTCAAGAGCTGTTCGCAGGCAAGGATGA

Peptide Sequence

PEP ID	AT3G27330.1
PEP Infomation	\| zinc finger (C3HC4-type RING finger) family protein \| Chr3:10116950-10120516 REVERSE LENGTH=913 \| 201606
Sequence	MKVRRKLGGGCGGDVVVSWRTFFWFVILFVFSFVLFSTMFIFKGKFRPVVRSTISFSTAV TARAVFRESISSSPAVTIREAVKLPEQTLVFLKYPQSRRLFTKDDLICVFSGSSKLRKVY PTAVDRDKFGGQIVRCPETPRGYTISLAVSRWTTDDHLPAGPTHRYDWLVYDAVIDYDNS TVVFVKGLNLRPGRVADVSRYECVYGWDFAKHNRLIRSDVITAAQEIVRCRTPLAVLDGP KAARGPVKVSVRIKGGTGMLPSIAQPVRIINPPRKKPFQMCVCTMTRNAAAVLREWVMYH AGIGVQRWFIYDNNSDDDIIAEIENLERRGYNISRHFWPWIKTQEAGFSNCAIRAKSDCD WIAFIDVDEFFYIPSGETLTSVIRNYTTTDSIGEIRTPCHSFGPSGLRSRPRSGVTSGYT CRVVLPERHKSIIRPEAMNATLINVVHHFHLRDGFTFADMDKDIMVINHYKYQVWEVFKE KFYRRVATYVADWQNEENVGSRDRAPGLGTRPVEPSDWAERFCEVNDTGLRDQVFEKFKD KKTQRLVWEKAEEDDNIQRMVSETPLRVTNRSGDGSNGSKEVSIAREKNGENAEIFISPR FKSAAAMAGWDEEDLIIASFVVDDTPERSSSKRRRRSNLLFKSTPPSGSSRRNQRVKQSL VPLPVIDLDKVIRHEEEKSAEKKKKKREMETETKEEKKIDKDEKSLSDHVVLPCIDKLRD ELSCAICLEICFEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNGRYCTVNTVLWN TIQLLFPKEVEAQRAASANLKGKETPSPRNPNQRLRSRNRETALFQERLQREDISRLLVS EERSERSERRRRSTSMRLDQNRDAALAMRLQRQEFASAFGATTAETSSSSVSTLSRARAN LQAMASRAVRRQG

Transcript Sequence

Transcript ID	AT3G27330.1
Transcript Infomation	\| zinc finger (C3HC4-type RING finger) family protein \| Chr3:10116674-10120645 REVERSE LENGTH=3147 \| 201606
Sequence	ACTCTTCTCATCATCCAAAACCAGAAACTTTGACCGGAAAAGAATCAGAGAAGTAAAGAA AAACAGAACAAAATTAAAACAGAATTTCTTCTCTAATCCATTACGCCGGCGATTTCGGCG GCGTAGGAGATGAAAGTTCGTAGGAAACTTGGTGGTGGTTGCGGCGGAGACGTCGTTGTT TCATGGCGGACGTTCTTTTGGTTCGTGATTCTGTTTGTCTTCTCCTTCGTTCTCTTCTCC ACCATGTTTATTTTTAAGGGGAAGTTTCGTCCGGTGGTTCGTTCGACGATAAGCTTCTCA ACGGCTGTTACGGCAAGGGCGGTTTTCCGTGAGTCTATATCGTCTTCTCCGGCGGTTACG ATTCGTGAAGCGGTGAAATTACCTGAACAAACTCTGGTTTTCCTAAAATACCCTCAGTCT CGTCGGTTATTTACAAAAGACGATCTCATTTGCGTTTTCTCCGGTTCGTCGAAGCTACGG AAAGTGTATCCGACGGCTGTGGACAGAGACAAATTTGGAGGTCAGATCGTACGGTGTCCT GAGACGCCACGTGGCTACACCATTTCGCTTGCCGTTTCGAGATGGACGACCGATGATCAT CTCCCGGCTGGACCAACTCACCGGTATGATTGGCTGGTTTACGACGCCGTGATCGACTAC GATAACTCTACGGTGGTTTTTGTCAAGGGGCTTAATCTACGGCCAGGAAGAGTTGCTGAC GTGTCGAGATATGAGTGCGTGTACGGTTGGGATTTCGCGAAACATAATCGGTTAATAAGA TCAGATGTCATCACTGCGGCTCAGGAGATCGTACGGTGTAGAACACCGTTAGCTGTGTTA GACGGCCCAAAAGCGGCCCGTGGGCCTGTTAAAGTCTCGGTTAGAATCAAAGGAGGAACC GGAATGCTTCCTTCTATCGCTCAGCCGGTTCGGATCATTAACCCGCCGCGAAAGAAACCC TTTCAAATGTGCGTTTGCACCATGACCCGAAACGCAGCCGCGGTTTTGAGAGAGTGGGTG ATGTATCACGCCGGAATTGGCGTTCAACGGTGGTTCATCTATGACAACAACAGCGACGAC GATATCATCGCCGAGATCGAGAATCTCGAAAGACGTGGTTACAACATCTCTAGACATTTC TGGCCGTGGATTAAAACTCAGGAAGCCGGATTCTCTAATTGCGCGATCCGTGCAAAGAGC GATTGCGATTGGATTGCGTTTATCGACGTCGACGAGTTCTTCTACATCCCATCCGGTGAA ACTCTAACTTCCGTCATCAGAAATTACACAACCACCGACTCAATCGGTGAAATTCGAACA CCTTGCCACAGTTTCGGGCCATCGGGTTTGAGATCTCGGCCTCGGAGTGGAGTCACGTCG GGATACACTTGCCGTGTGGTGTTACCGGAGAGACACAAGAGCATAATCCGGCCGGAAGCG ATGAACGCGACGCTGATAAACGTTGTTCACCATTTTCACCTCAGAGATGGATTCACGTTT GCTGACATGGATAAGGATATAATGGTAATCAACCACTACAAGTATCAGGTGTGGGAGGTT TTCAAAGAGAAGTTTTATCGGCGAGTCGCGACGTACGTAGCGGATTGGCAAAACGAAGAG AATGTCGGGTCAAGAGATCGAGCACCCGGTTTAGGAACCCGACCCGTTGAACCATCTGAT TGGGCTGAGAGATTCTGTGAGGTTAATGATACGGGGCTTAGAGATCAAGTGTTTGAGAAG TTCAAAGACAAAAAAACGCAGCGTTTAGTTTGGGAAAAAGCGGAAGAAGACGACAATATC CAGAGAATGGTGAGTGAAACACCATTGAGAGTTACTAATCGATCTGGAGATGGATCAAAT GGATCAAAGGAAGTATCGATCGCGAGAGAGAAGAATGGTGAAAACGCAGAGATATTCATC AGCCCGAGATTCAAATCAGCGGCGGCTATGGCGGGTTGGGACGAAGAAGATCTGATAATC GCTAGCTTTGTGGTAGATGATACTCCTGAAAGAAGTTCTTCAAAGCGAAGGAGACGTTCC AATTTGTTGTTTAAATCAACCCCACCTTCTGGTTCTTCAAGAAGGAATCAGCGTGTTAAG CAAAGTCTTGTTCCGTTACCTGTTATTGATCTTGATAAAGTAATCAGACATGAAGAAGAA AAATCTGCAGAGAAGAAGAAAAAGAAGAGAGAGATGGAAACAGAAACAAAAGAAGAGAAG AAAATAGATAAAGATGAGAAGAGTTTGTCAGATCATGTTGTGCTTCCTTGCATAGATAAG CTTCGAGATGAATTGTCTTGCGCGATTTGTCTTGAGATTTGCTTTGAACCTAGTACTACA ACTTGTGGACACAGCTTCTGCAAAAAGTGTTTGCGATCTGCGGCGGATAAGTGTGGAAGG AAATGCCCTAAATGCAGGCAACTAATAGGAAATGGAAGATATTGTACTGTCAATACGGTT CTTTGGAACACAATCCAGCTTTTGTTCCCTAAAGAAGTCGAAGCACAGAGAGCTGCTTCT GCTAACTTGAAAGGCAAGGAGACACCGAGTCCTAGAAATCCGAATCAAAGGCTAAGAAGC AGAAACAGGGAAACTGCATTGTTTCAAGAGAGGTTACAAAGAGAGGATATTTCGAGATTG CTTGTATCTGAAGAGAGAAGTGAGAGGAGCGAAAGAAGGAGGAGAAGTACAAGTATGAGG TTGGATCAAAATAGGGATGCAGCATTAGCGATGCGGTTACAGCGACAGGAGTTCGCATCA GCTTTTGGCGCAACGACGGCTGAAACTTCTTCTTCATCGGTTTCTACTCTGTCGCGAGCA AGAGCTAACCTGCAAGCTATGGCGTCAAGAGCTGTTCGCAGGCAAGGATGAAATGTGATC ATCATCTTGAATGACATTCATCATCATCTTTAGCCTGAATCTGCCACAGATCAAGGCAAT TTTCACATTGTAAAACTACACTATTATTCGGTTCCGTATTCCTGAAATTTCCTTAGAAAT CCATAGTCTGATCATGAAGATTGTAATCGATCCGTTACCATGGAACCTTTGTTGGTGTCA GAGACTTGTGAGAGTTTGATAATGGGAAGACATACTAAATTAGGTTAACTTGTGTTTTTG TAATAACTTGTGTGTCACAAATAGGTT