Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G25690.5
CDS Infomation	\| Hydroxyproline-rich glycoprotein family protein \| Chr3:9353050-9357757 FORWARD LENGTH=3021 \| 201606
Sequence	ATGAGTTTCCACACCATATCATGGTTTGTTGTTGCTGCTTCCATTGCAGCAGTTACTGTT AAGCGGCTCAACGTTAAACCCTCCAAACCAAGCAAACCATCAGATAATGGCGAAGGAGGC GACAAAGAACAGTCTGTGGATCCCGACTACAATCTCAATGACAAGAATCTGCAAGAGGAG GAAGAGGAAGAAGAAGAAGAGGTGAAACTAATCAACAGTGTAATCAATCAGACTCGTGGA AGTTTCTCGGACTACTTAGATGATGATATATTACCCGAGTTTGAAGATCTTTTATCTGGT GAGATTGAGTATCCATTGCCTGATGATGATAATAACTTGGAGAAAGCTGAGAAAGAGAGG AAATATGAAGTCGAGATGGCTTATAACGATGGTGAGCTCGAACGGTTAAAGCAATTAGTT AAGGAGCTAGAAGAAAGAGAAGTGAAACTTGAAGGTGAATTACTCGAGTATTATGGACTT AAAGAGCAAGAATCAGATATCGTTGAGTTACAAAGACAGCTCAAGATCAAGACTGTTGAG ATTGATATGTTAAACATCACTATTAATTCTCTGCAAGCTGAGAGAAAAAAGCTTCAAGAA GAGCTCTCACAAAACGGTATTGTAAGAAAGGAGCTTGAAGTGGCGAGAAACAAGATCAAG GAGTTGCAGAGGCAAATCCAACTCGATGCTAACCAGACGAAAGGACAGTTACTGTTGCTT AAGCAGCATGTATCAAGTCTTCAAATGAAAGAAGAAGAAGCTATGAATAAAGATACTGAA GTTGAGAGGAAGCTTAAAGCTGTACAGGATTTGGAAGTGCAAGTTATGGAACTCAAGAGA AAAAATAGAGAGCTTCAACATGAGAAGAGAGAGTTATCCATTAAACTCGATTCAGCGGAA GCAAGAATTGCAACTCTTTCAAACATGACTGAGAGCGATAAAGTGGCGAAAGTTAGAGAA GAGGTTAACAATTTGAAGCATAACAATGAGGATTTGTTAAAGCAAGTGGAAGGGCTTCAA ATGAATAGGTTTAGTGAAGTTGAGGAATTGGTTTATCTACGTTGGGTCAATGCATGTTTA CGGTATGAGTTAAGAAACTACCAGACACCAGCTGGTAAAATCTCAGCTCGTGACTTAAGC AAGAACCTAAGCCCCAAGTCCCAAGCAAAAGCAAAACGGTTAATGTTAGAGTATGCTGGT TCAGAGCGTGGCCAAGGAGATACCGACTTAGAAAGCAACTATTCTCAACCTTCATCTCCG GGAAGCGATGATTTCGATAATGCTTCAATGGATAGTTCCACAAGTAGGTTTAGTAGTTTT AGCAAGAAGCCAGGATTGATTCAGAAACTTAAGAAATGGGGCAAAAGCAAGGATGATTCA AGCGTTCAATCATCGCCTTCAAGATCATTTTACGGAGGATCACCGGGAAGACTTAGCTCG AGTATGAATAAACAGAGAGGTCCTTTAGAATCTTTGATGATTAGAAACGCTGGTGAATCC GTAGCCATAACAACATTTGGTCAAGTGGATCAAGAATCTCCTGGTACCCCTGAAACACCG AATCTTCCAAGAATCAGAACACAACAACAAGCTTCTTCTCCGGGTGAGGGTTTGAATTCC GTTGCAGCATCGTTCCACGTGATGTCTAAATCGGTTGACAATGTTTTGGATGAGAAGTAT CCTGCGTACAAAGACAGGCATAAGTTGGCAGTTGAAAGAGAGAAGCACATTAAGCATAAA GCAGATCAAGCAAGAGCAGAGAGATTTGGCGGTAATGTGGCTTTGCCTCCTAAACTTGCT CAACTAAAGGAGAAAAGGGTTGTTGTTCCCTCTGTGATCACAGCCACAGGTGATCAGTCT AACGAGTCAAATGAATCTAACGAAGGTAAAGCCAGCGAAAACGCTGCAACCGTAACCAAA ATGAAGCTTGTAGACATTGAGAAACGACCTCCTAGAGTACCTCGCCCGCCTCCAAGATCA GCTGGAGGTGGTAAAAGTACTAACTTGCCTTCAGCAAGACCTCCTTTACCTGGTGGTGGT CCACCACCACCTCCTCCACCACCTGGCGGTGGACCGCCTCCTCCACCTGGCGGTGGACCA CCTCCACCACCACCTCCTCCTGGAGCACTTGGAAGAGGAGCGGGAGGCGGGAACAAAGTT CACCGAGCTCCTGAGCTTGTTGAGTTTTATCAATCATTGATGAAACGTGAATCGAAGAAA GAAGGTGCACCTTCTTTGATCTCTTCAGGAACTGGTAATTCTTCAGCAGCTAGGAACAAT ATGATTGGGGAAATCGAGAACCGATCAACATTCCTCTTAGCAGTAAAAGCGGATGTGGAG ACACAAGGGGACTTTGTACAGTCGTTAGCAACTGAAGTCCGAGCTTCTTCTTTCACCGAC ATAGAAGATCTCTTGGCGTTCGTTAGCTGGCTAGATGAAGAGCTCTCCTTCTTGGTTGAT GAAAGGGCAGTTCTTAAACACTTTGACTGGCCAGAAGGTAAAGCTGATGCGCTACGAGAA GCAGCTTTTGAATATCAAGATCTTATGAAACTGGAGAAGCAAGTTACGTCCTTTGTTGAT GATCCTAATCTCTCTTGTGAACCTGCTTTGAAGAAGATGTACAAGTTGCTAGAGAAGGTT GAACAAAGTGTATACGCGCTTTTACGTACGAGAGACATGGCGATTTCACGATATAAAGAA TTCGGGATTCCAGTTGATTGGTTATCTGATACTGGCGTCGTAGGAAAGATCAAGCTTTCG TCAGTCCAGCTCGCGAAGAAGTACATGAAACGAGTAGCTTATGAGCTAGATTCAGTGAGC GGATCCGATAAAGATCCGAACAGAGAGTTCTTGCTTCTCCAAGGTGTTCGTTTCGCGTTT AGAGTCCATCAGTTTGCTGGAGGGTTTGATGCAGAGAGCATGAAAGCATTTGAGGAACTT AGAAGCAGAGCCAAAACTGAAAGTGGAGACAATAATAATAATAATAATAATAATAGCAAT GAAGAAGAATCTGTAAACTGA

Peptide Sequence

PEP ID	AT3G25690.5
PEP Infomation	\| Hydroxyproline-rich glycoprotein family protein \| Chr3:9353050-9357757 FORWARD LENGTH=1006 \| 201606
Sequence	MSFHTISWFVVAASIAAVTVKRLNVKPSKPSKPSDNGEGGDKEQSVDPDYNLNDKNLQEE EEEEEEEVKLINSVINQTRGSFSDYLDDDILPEFEDLLSGEIEYPLPDDDNNLEKAEKER KYEVEMAYNDGELERLKQLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVE IDMLNITINSLQAERKKLQEELSQNGIVRKELEVARNKIKELQRQIQLDANQTKGQLLLL KQHVSSLQMKEEEAMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAE ARIATLSNMTESDKVAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACL RYELRNYQTPAGKISARDLSKNLSPKSQAKAKRLMLEYAGSERGQGDTDLESNYSQPSSP GSDDFDNASMDSSTSRFSSFSKKPGLIQKLKKWGKSKDDSSVQSSPSRSFYGGSPGRLSS SMNKQRGPLESLMIRNAGESVAITTFGQVDQESPGTPETPNLPRIRTQQQASSPGEGLNS VAASFHVMSKSVDNVLDEKYPAYKDRHKLAVEREKHIKHKADQARAERFGGNVALPPKLA QLKEKRVVVPSVITATGDQSNESNESNEGKASENAATVTKMKLVDIEKRPPRVPRPPPRS AGGGKSTNLPSARPPLPGGGPPPPPPPPGGGPPPPPGGGPPPPPPPPGALGRGAGGGNKV HRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSSAARNNMIGEIENRSTFLLAVKADVE TQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEELSFLVDERAVLKHFDWPEGKADALRE AAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMYKLLEKVEQSVYALLRTRDMAISRYKE FGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAF RVHQFAGGFDAESMKAFEELRSRAKTESGDNNNNNNNNSNEEESVN

Transcript Sequence

Transcript ID	AT3G25690.5
Transcript Infomation	\| Hydroxyproline-rich glycoprotein family protein \| Chr3:9352444-9357953 FORWARD LENGTH=3442 \| 201606
Sequence	CTTATTCTCACACTTTCTTTCTTTAGCAATGAAATTTCAAATTTTGAAGAGCGATTTACA AAAACCGTTGATTAAAAATGAAACCTTCACGCCATTGTTCAATACTATCAAAGTTCAGTG CTTTCTCTATAACCAACAATCGACATTGGAAGAAGAAAACTCTAATCTTCGCTAGTTGAA GTCTGATTGGTAAAAAAGAATCAGAATCCAGTGAAGGGTCTAAATATGAGTTTCCACACC ATATCATGGTTTGTTGTTGCTGCTTCCATTGCAGCAGTTACTGTTAAGCGGCTCAACGTT AAACCCTCCAAACCAAGCAAACCATCAGATAATGGCGAAGGAGGCGACAAAGAACAGTCT GTGGATCCCGACTACAATCTCAATGACAAGAATCTGCAAGAGGAGGAAGAGGAAGAAGAA GAAGAGGTGAAACTAATCAACAGTGTAATCAATCAGACTCGTGGAAGTTTCTCGGACTAC TTAGATGATGATATATTACCCGAGTTTGAAGATCTTTTATCTGGTGAGATTGAGTATCCA TTGCCTGATGATGATAATAACTTGGAGAAAGCTGAGAAAGAGAGGAAATATGAAGTCGAG ATGGCTTATAACGATGGTGAGCTCGAACGGTTAAAGCAATTAGTTAAGGAGCTAGAAGAA AGAGAAGTGAAACTTGAAGGTGAATTACTCGAGTATTATGGACTTAAAGAGCAAGAATCA GATATCGTTGAGTTACAAAGACAGCTCAAGATCAAGACTGTTGAGATTGATATGTTAAAC ATCACTATTAATTCTCTGCAAGCTGAGAGAAAAAAGCTTCAAGAAGAGCTCTCACAAAAC GGTATTGTAAGAAAGGAGCTTGAAGTGGCGAGAAACAAGATCAAGGAGTTGCAGAGGCAA ATCCAACTCGATGCTAACCAGACGAAAGGACAGTTACTGTTGCTTAAGCAGCATGTATCA AGTCTTCAAATGAAAGAAGAAGAAGCTATGAATAAAGATACTGAAGTTGAGAGGAAGCTT AAAGCTGTACAGGATTTGGAAGTGCAAGTTATGGAACTCAAGAGAAAAAATAGAGAGCTT CAACATGAGAAGAGAGAGTTATCCATTAAACTCGATTCAGCGGAAGCAAGAATTGCAACT CTTTCAAACATGACTGAGAGCGATAAAGTGGCGAAAGTTAGAGAAGAGGTTAACAATTTG AAGCATAACAATGAGGATTTGTTAAAGCAAGTGGAAGGGCTTCAAATGAATAGGTTTAGT GAAGTTGAGGAATTGGTTTATCTACGTTGGGTCAATGCATGTTTACGGTATGAGTTAAGA AACTACCAGACACCAGCTGGTAAAATCTCAGCTCGTGACTTAAGCAAGAACCTAAGCCCC AAGTCCCAAGCAAAAGCAAAACGGTTAATGTTAGAGTATGCTGGTTCAGAGCGTGGCCAA GGAGATACCGACTTAGAAAGCAACTATTCTCAACCTTCATCTCCGGGAAGCGATGATTTC GATAATGCTTCAATGGATAGTTCCACAAGTAGGTTTAGTAGTTTTAGCAAGAAGCCAGGA TTGATTCAGAAACTTAAGAAATGGGGCAAAAGCAAGGATGATTCAAGCGTTCAATCATCG CCTTCAAGATCATTTTACGGAGGATCACCGGGAAGACTTAGCTCGAGTATGAATAAACAG AGAGGTCCTTTAGAATCTTTGATGATTAGAAACGCTGGTGAATCCGTAGCCATAACAACA TTTGGTCAAGTGGATCAAGAATCTCCTGGTACCCCTGAAACACCGAATCTTCCAAGAATC AGAACACAACAACAAGCTTCTTCTCCGGGTGAGGGTTTGAATTCCGTTGCAGCATCGTTC CACGTGATGTCTAAATCGGTTGACAATGTTTTGGATGAGAAGTATCCTGCGTACAAAGAC AGGCATAAGTTGGCAGTTGAAAGAGAGAAGCACATTAAGCATAAAGCAGATCAAGCAAGA GCAGAGAGATTTGGCGGTAATGTGGCTTTGCCTCCTAAACTTGCTCAACTAAAGGAGAAA AGGGTTGTTGTTCCCTCTGTGATCACAGCCACAGGTGATCAGTCTAACGAGTCAAATGAA TCTAACGAAGGTAAAGCCAGCGAAAACGCTGCAACCGTAACCAAAATGAAGCTTGTAGAC ATTGAGAAACGACCTCCTAGAGTACCTCGCCCGCCTCCAAGATCAGCTGGAGGTGGTAAA AGTACTAACTTGCCTTCAGCAAGACCTCCTTTACCTGGTGGTGGTCCACCACCACCTCCT CCACCACCTGGCGGTGGACCGCCTCCTCCACCTGGCGGTGGACCACCTCCACCACCACCT CCTCCTGGAGCACTTGGAAGAGGAGCGGGAGGCGGGAACAAAGTTCACCGAGCTCCTGAG CTTGTTGAGTTTTATCAATCATTGATGAAACGTGAATCGAAGAAAGAAGGTGCACCTTCT TTGATCTCTTCAGGAACTGGTAATTCTTCAGCAGCTAGGAACAATATGATTGGGGAAATC GAGAACCGATCAACATTCCTCTTAGCAGTAAAAGCGGATGTGGAGACACAAGGGGACTTT GTACAGTCGTTAGCAACTGAAGTCCGAGCTTCTTCTTTCACCGACATAGAAGATCTCTTG GCGTTCGTTAGCTGGCTAGATGAAGAGCTCTCCTTCTTGGTTGATGAAAGGGCAGTTCTT AAACACTTTGACTGGCCAGAAGGTAAAGCTGATGCGCTACGAGAAGCAGCTTTTGAATAT CAAGATCTTATGAAACTGGAGAAGCAAGTTACGTCCTTTGTTGATGATCCTAATCTCTCT TGTGAACCTGCTTTGAAGAAGATGTACAAGTTGCTAGAGAAGGTTGAACAAAGTGTATAC GCGCTTTTACGTACGAGAGACATGGCGATTTCACGATATAAAGAATTCGGGATTCCAGTT GATTGGTTATCTGATACTGGCGTCGTAGGAAAGATCAAGCTTTCGTCAGTCCAGCTCGCG AAGAAGTACATGAAACGAGTAGCTTATGAGCTAGATTCAGTGAGCGGATCCGATAAAGAT CCGAACAGAGAGTTCTTGCTTCTCCAAGGTGTTCGTTTCGCGTTTAGAGTCCATCAGTTT GCTGGAGGGTTTGATGCAGAGAGCATGAAAGCATTTGAGGAACTTAGAAGCAGAGCCAAA ACTGAAAGTGGAGACAATAATAATAATAATAATAATAATAGCAATGAAGAAGAATCTGTA AACTGAGTTTTATTACTTCTCTCTGTATCATTTGTATCACATACTTCATTTATAGTACAG TGAAATTTATAGATTCTTGTAAAAAGAAATACAACATTTTTCTTTGACAAAAAAAAAAGA AATACAATTTTTTTGTGTGTAGGTTTGCAATGATCTTTATTTACTATATAGTAGTATTAG ATAATGAATTGGCAATAAATTT