Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G24220.1
CDS Infomation	\| nine-cis-epoxycarotenoid dioxygenase 6 \| Chr3:8761439-8763172 FORWARD LENGTH=1734 \| 201606
Sequence	ATGCAACACTCTCTTCGTTCTGATCTTCTTCCGACGAAGACTTCTCCTCGTTCTCATTTA CTTCCACAACCCAAAAATGCAAATATTTCTCGACGAATTCTCATTAACCCTTTCAAGATA CCGACACTTCCTGATCTCACTTCTCCGGTTCCGTCACCGGTTAAGCTCAAACCAACGTAT CCAAACTTAAACCTTCTTCAGAAGCTAGCGGCTACGATGCTCGACAAGATTGAGTCCTCT ATCGTTATTCCTATGGAGCAGAATCGCCCGCTTCCTAAACCGACCGACCCGGCGGTTCAA TTATCAGGTAACTTCGCTCCGGTTAATGAATGTCCGGTTCAGAACGGTTTAGAAGTGGTT GGTCAGATTCCTTCTTGTCTAAAAGGAGTTTACATCCGTAACGGTGCAAACCCTATGTTT CCGCCGTTAGCCGGACATCATTTATTTGACGGTGACGGAATGATTCACGCCGTTAGTATC GGTTTTGATAACCAGGTTAGTTACAGCTGCCGGTACACTAAAACAAACCGGCTTGTTCAA GAAACCGCGCTTGGACGATCGGTTTTCCCTAAACCAATCGGCGAGCTTCACGGCCATTCC GGTCTAGCTCGACTCGCTCTCTTCACGGCTCGAGCTGGGATCGGTCTAGTGGACGGGACA CGTGGCATGGGCGTAGCTAACGCCGGTGTGGTTTTCTTTAACGGCAGGTTATTAGCCATG TCAGAAGATGATCTTCCTTACCAAGTGAAGATCGACGGTCAAGGAGATCTTGAGACGATC GGACGGTTCGGATTCGATGACCAGATTGACTCTTCAGTGATAGCGCATCCTAAGGTGGAC GCGACCACAGGAGATCTCCATACACTGAGCTACAACGTTTTGAAGAAACCTCATCTCAGG TATCTTAAATTCAACACGTGCGGGAAAAAGACACGTGACGTGGAGATCACGCTCCCTGAA CCAACGATGATTCATGATTTCGCGATAACCGAGAATTTTGTCGTTATACCGGATCAGCAA ATGGTATTCAAATTATCCGAAATGATTCGGGGCGGGTCACCCGTTATCTACGTTAAAGAA AAAATGGCGAGATTTGGAGTTTTGTCAAAGCAGGATCTGACCGGGTCGGATATAAATTGG GTTGATGTACCGGATTGTTTCTGTTTCCATCTATGGAATGCGTGGGAAGAGAGAACCGAA GAGGGAGACCCAGTTATCGTCGTAATCGGGTCATGTATGAGCCCACCCGACACGATCTTT AGTGAATCAGGAGAACCAACCCGGGTTGAATTAAGTGAGATCCGGTTAAACATGCGTACA AAAGAATCGAACCGTAAGGTTATCGTAACCGGAGTGAATTTAGAAGCGGGTCACATAAAC CGTAGTTACGTGGGCCGGAAAAGCCAGTTCGTTTACATAGCAATAGCCGATCCTTGGCCC AAATGCAGTGGCATTGCGAAGGTAGATATACAAAACGGCACCGTTTCAGAGTTTAATTAC GGACCGAGCCGGTTCGGTGGAGAACCGTGCTTTGTACCGGAGGGAGAAGGAGAAGAAGAC AAAGGTTATGTAATGGGGTTTGTGAGAGACGAAGAGAAAGACGAGTCGGAGTTTGTGGTG GTCGACGCGACGGATATGAAGCAAGTCGCGGCGGTGCGCTTGCCGGAGAGGGTACCTTAT GGTTTCCATGGAACGTTCGTGAGCGAGAATCAGTTGAAGGAACAAGTTTTCTGA

Peptide Sequence

PEP ID	AT3G24220.1
PEP Infomation	\| nine-cis-epoxycarotenoid dioxygenase 6 \| Chr3:8761439-8763172 FORWARD LENGTH=577 \| 201606
Sequence	MQHSLRSDLLPTKTSPRSHLLPQPKNANISRRILINPFKIPTLPDLTSPVPSPVKLKPTY PNLNLLQKLAATMLDKIESSIVIPMEQNRPLPKPTDPAVQLSGNFAPVNECPVQNGLEVV GQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQ ETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAM SEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLR YLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKE KMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIF SESGEPTRVELSEIRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWP KCSGIAKVDIQNGTVSEFNYGPSRFGGEPCFVPEGEGEEDKGYVMGFVRDEEKDESEFVV VDATDMKQVAAVRLPERVPYGFHGTFVSENQLKEQVF

Transcript Sequence

Transcript ID	AT3G24220.1
Transcript Infomation	\| nine-cis-epoxycarotenoid dioxygenase 6 \| Chr3:8761419-8763303 FORWARD LENGTH=1885 \| 201606
Sequence	GTCGCTCACAAGTCACCACCATGCAACACTCTCTTCGTTCTGATCTTCTTCCGACGAAGA CTTCTCCTCGTTCTCATTTACTTCCACAACCCAAAAATGCAAATATTTCTCGACGAATTC TCATTAACCCTTTCAAGATACCGACACTTCCTGATCTCACTTCTCCGGTTCCGTCACCGG TTAAGCTCAAACCAACGTATCCAAACTTAAACCTTCTTCAGAAGCTAGCGGCTACGATGC TCGACAAGATTGAGTCCTCTATCGTTATTCCTATGGAGCAGAATCGCCCGCTTCCTAAAC CGACCGACCCGGCGGTTCAATTATCAGGTAACTTCGCTCCGGTTAATGAATGTCCGGTTC AGAACGGTTTAGAAGTGGTTGGTCAGATTCCTTCTTGTCTAAAAGGAGTTTACATCCGTA ACGGTGCAAACCCTATGTTTCCGCCGTTAGCCGGACATCATTTATTTGACGGTGACGGAA TGATTCACGCCGTTAGTATCGGTTTTGATAACCAGGTTAGTTACAGCTGCCGGTACACTA AAACAAACCGGCTTGTTCAAGAAACCGCGCTTGGACGATCGGTTTTCCCTAAACCAATCG GCGAGCTTCACGGCCATTCCGGTCTAGCTCGACTCGCTCTCTTCACGGCTCGAGCTGGGA TCGGTCTAGTGGACGGGACACGTGGCATGGGCGTAGCTAACGCCGGTGTGGTTTTCTTTA ACGGCAGGTTATTAGCCATGTCAGAAGATGATCTTCCTTACCAAGTGAAGATCGACGGTC AAGGAGATCTTGAGACGATCGGACGGTTCGGATTCGATGACCAGATTGACTCTTCAGTGA TAGCGCATCCTAAGGTGGACGCGACCACAGGAGATCTCCATACACTGAGCTACAACGTTT TGAAGAAACCTCATCTCAGGTATCTTAAATTCAACACGTGCGGGAAAAAGACACGTGACG TGGAGATCACGCTCCCTGAACCAACGATGATTCATGATTTCGCGATAACCGAGAATTTTG TCGTTATACCGGATCAGCAAATGGTATTCAAATTATCCGAAATGATTCGGGGCGGGTCAC CCGTTATCTACGTTAAAGAAAAAATGGCGAGATTTGGAGTTTTGTCAAAGCAGGATCTGA CCGGGTCGGATATAAATTGGGTTGATGTACCGGATTGTTTCTGTTTCCATCTATGGAATG CGTGGGAAGAGAGAACCGAAGAGGGAGACCCAGTTATCGTCGTAATCGGGTCATGTATGA GCCCACCCGACACGATCTTTAGTGAATCAGGAGAACCAACCCGGGTTGAATTAAGTGAGA TCCGGTTAAACATGCGTACAAAAGAATCGAACCGTAAGGTTATCGTAACCGGAGTGAATT TAGAAGCGGGTCACATAAACCGTAGTTACGTGGGCCGGAAAAGCCAGTTCGTTTACATAG CAATAGCCGATCCTTGGCCCAAATGCAGTGGCATTGCGAAGGTAGATATACAAAACGGCA CCGTTTCAGAGTTTAATTACGGACCGAGCCGGTTCGGTGGAGAACCGTGCTTTGTACCGG AGGGAGAAGGAGAAGAAGACAAAGGTTATGTAATGGGGTTTGTGAGAGACGAAGAGAAAG ACGAGTCGGAGTTTGTGGTGGTCGACGCGACGGATATGAAGCAAGTCGCGGCGGTGCGCT TGCCGGAGAGGGTACCTTATGGTTTCCATGGAACGTTCGTGAGCGAGAATCAGTTGAAGG AACAAGTTTTCTGACTTAGTAGTGTGTATATTCATAATTATATGCTATCTCCTCTTTTTA GGTTTACGTTTAAATTGGTTAATGTGTTGATATTTTTGGGTATAAGAAAGGAGTTATTAC ATCTTCCATATCATAATTAATATTT