Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G22400.1
CDS Infomation	\| PLAT/LH2 domain-containing lipoxygenase family protein \| Chr3:7927011-7931167 FORWARD LENGTH=2661 \| 201606
Sequence	ATGATCCACACCGACATCGCAGAGATCTTATGCGTCAAACCCAAGACAACGAAGAAGACA AAAACAATGGAGGAAGATGTCAAGAAGACGACGACGATGAAGATAGAAGGAGAAGTTGTT GTGATGAAGAAGAATCTCCTTGATTTCAAAGACGTTATGGCTTCTCTTCTTGATCGTGTC AATGAGCTTCTTGGTCGTCGTGTCTCTCTCCACCTCATCAGCTCTCACCAACCCGACCCG GCCAATGAGAAGAGAGGAAGACTTGGAAAAGCAGCACATCTGGAAAAATGGGTAACAAAA ATAAAAACGTCAGTAACCGCTGAGGAAACTGCGTTTGGAGTAACGTTTGATTGGGACGAG TCAATGGGACCACCGGCTGCATTTGTGATCAAGAACCACCACCATAGTCAATTCTACCTT AAGTCCCTCACCCTCCGCGGCTTCCCTGATGGCGAAGGTGGTGCCACTGCGATACATTTC ATCTGCAATTCTTGGATTTACCCGAATCATCGATACCGCTCCGACCGCGTTTTCTTCTCT AACAAGGCATATCTTCCAAGTGAAACACCGGAGCTAATCAAAGAGCTAAGAGAAGAAGAG CTAAAGAATCTAAGAGGCAATGAGAAAGGAGGAGAATTCAAAGAATGGGACAGAGTTTAC GACTACGCTTATTACAACGACTTGGGTGCTCCTGACAAGGGTCCTGACTCAGTTCGTCCG GTTCTTGGCGGTTCACCTGAGCTGCCTTATCCTCGCCGTGGCAAAACCGGCCGTAAATCC ACCAAATCAGACCCTAAGTCTGAAAGCAGGCTGGCTTTACTAAACCTAAACATATACGTG CCAAGGGACGAGCGATTTAGCCATGTGAAGTTTTCAGACTTCCTCGCTTATGCACTCAAG TCCGTGACTCAAGTGCTTGTCCCTGAGATCGCCTCTGTTTGCGACAAGACCATCAACGAG TTTGACTCCTTCGAAGATGTTTTTCACCTCTATGACGGTAGTATTAAGCTCGCCAATGGT CACACCATTTCTAAGCTCCGTGATGTTATCCCGTGGGAGATGTTTAGAGAGCTAGTTCGC AACGACGGAGAACGGTTCTTGAAGTATCCCTTGCCTGACATCCTCAAAGAGAGCAGATCG GCTTGGAGGACTGACGAAGAGTTTGCTCGAGAAATGCTGGCCGGTCTTAATCCGGTGGTG ATTAGCCGTCTTCAGGAATTTCCACCAAAGAGCTGTCTGGACTCTGCAAAGTATGGAAAC CAACACTCTTCCATACGAACAGAGCACATAGAATCAAACATGAACGGCCTCAATGTCCAA GAAGCTTTGGAACAGAATAAGCTATACATATTGGATCATCACGACGCATTGATGCCTTAC CTGACACGGATAAACTCAACAAACACTAAAACCTATGCGACCCGAACCCTGCTGTTGCTT CAAGCAGACGGAACACTGAAGCCTCTCGCCATAGAGCTGAGTCTTCCACACGCACAAGGC GAATCATATGGATCGGTCAGCAAAGTTTTCACACCAGCAGAGAAAGGTGTCGAGGGATCG GTTTGGCAACTTGCTAAGGCTTATGCTGCGGTCAATGACTCTGGTTATCATCAGCTTATA AGCCATTGGTTGCAAACGCATGCGGTGATTGAACCGTTCATAATCGCGTCCAATAGGCAG CTCAGCGTGGTCCATCCGATCCATAAACTTCTACATCCTCATTTCCGTGACACTATGAAC ATCAACGCATTAGCGCGTCATGTACTCATAAACTCAGACGGAGTTCTTGAGAGAACAGTC TTCCCTAGTCGATACGCCATGGAAATGTCTTCTTCAATTTACAAGAATTGGGTTTTCACC GAGCAGGCTCTCCCAAAAGACCTCCTCAAACGAGGAGTTGCTGTTGAAGATCCAAACAGT GACAACGGCGTTAAGCTTCTGATCGAAGATTACCCGTTTGCGGTCGACGGTTTAGAGATT TGGTCAGCGATCAAAACATGGGTCACAGAGTACTGCACATTCTACTACAATAATGACAAA ACCGTCCAAACGGATACAGAGATCCAATCATGGTGGACCGAGCTCCGAACCAAAGGCCAC GGCGACAAACGACACGAGTCATGGTGGCCTTCGATGCAAACCCGCGACGACCTAATCGAA ACCTGCACGATCATCATCTGGATCGCCTCTGCTCTTCACGCAGCAGTAAATTTCGGACAG TACCCTTACGCCGGTTTTCTCCCTAACCGTCCTACCGTCAGCCGCCGGTTTATGCCTGAA CCAGGTACGGATGAGTATGCTGAGCTGGAGGAAGATGCTGACGTAGCGTTCTTGAAGACG ATCACGCCGCAGTTACAGACTCTACTTGGTATCTCCATCATAGAGATATTGTCTATGCAT TCAACGGACGAGATCTACTTAGGGCAAAGAGATTCACCGAATTGGACGGCGGATGATGAG CCTTTGGAGGCGTTTAAGCGGTTTGGGAAAGAACTTGAGCTGATAGAGAACAATATTATA CGAAGAAACAATGACAAGAGGTTCAAGAACAGAACCGGACCGGTTAACATACCGTACACA TTGTTGTACCCGAATACTACGGATTATACGAGAGAAGGTGGGATTACTGGGAAAGGGATC CCGAACAGTGTCTCAATCTAA

Peptide Sequence

PEP ID	AT3G22400.1
PEP Infomation	\| PLAT/LH2 domain-containing lipoxygenase family protein \| Chr3:7927011-7931167 FORWARD LENGTH=886 \| 201606
Sequence	MIHTDIAEILCVKPKTTKKTKTMEEDVKKTTTMKIEGEVVVMKKNLLDFKDVMASLLDRV NELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDE SMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFS NKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRP VLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALK SVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVR NDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGN QHSSIRTEHIESNMNGLNVQEALEQNKLYILDHHDALMPYLTRINSTNTKTYATRTLLLL QADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAYAAVNDSGYHQLI SHWLQTHAVIEPFIIASNRQLSVVHPIHKLLHPHFRDTMNINALARHVLINSDGVLERTV FPSRYAMEMSSSIYKNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLIEDYPFAVDGLEI WSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIE TCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFMPEPGTDEYAELEEDADVAFLKT ITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNII RRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI

Transcript Sequence

Transcript ID	AT3G22400.1
Transcript Infomation	\| PLAT/LH2 domain-containing lipoxygenase family protein \| Chr3:7926728-7931351 FORWARD LENGTH=3128 \| 201606
Sequence	AGTACATACCACTTGGTGTATAGTTTTGGGAAAGAAAAAATTACTAGAGTTGGAGAAAGA ATTTATTGTAGCAAAAATGTAAAACCATTGTGACTGTTCAGCTCTAGCTAGATTCAATAT AAATATAGTATCAGATTTGTGTTATATGCATAAAAAGAACATTCTTATAATCACACATCT CTCTCTCTTCATTCCCCAAGCATAGAATCTCTCCCTCTCTATCTATCTCTCTTTCACCTT TTCTTGATTCTTACTCAGAGAAAATTCTGCAATATATATCGCCATGATCCACACCGACAT CGCAGAGATCTTATGCGTCAAACCCAAGACAACGAAGAAGACAAAAACAATGGAGGAAGA TGTCAAGAAGACGACGACGATGAAGATAGAAGGAGAAGTTGTTGTGATGAAGAAGAATCT CCTTGATTTCAAAGACGTTATGGCTTCTCTTCTTGATCGTGTCAATGAGCTTCTTGGTCG TCGTGTCTCTCTCCACCTCATCAGCTCTCACCAACCCGACCCGGCCAATGAGAAGAGAGG AAGACTTGGAAAAGCAGCACATCTGGAAAAATGGGTAACAAAAATAAAAACGTCAGTAAC CGCTGAGGAAACTGCGTTTGGAGTAACGTTTGATTGGGACGAGTCAATGGGACCACCGGC TGCATTTGTGATCAAGAACCACCACCATAGTCAATTCTACCTTAAGTCCCTCACCCTCCG CGGCTTCCCTGATGGCGAAGGTGGTGCCACTGCGATACATTTCATCTGCAATTCTTGGAT TTACCCGAATCATCGATACCGCTCCGACCGCGTTTTCTTCTCTAACAAGGCATATCTTCC AAGTGAAACACCGGAGCTAATCAAAGAGCTAAGAGAAGAAGAGCTAAAGAATCTAAGAGG CAATGAGAAAGGAGGAGAATTCAAAGAATGGGACAGAGTTTACGACTACGCTTATTACAA CGACTTGGGTGCTCCTGACAAGGGTCCTGACTCAGTTCGTCCGGTTCTTGGCGGTTCACC TGAGCTGCCTTATCCTCGCCGTGGCAAAACCGGCCGTAAATCCACCAAATCAGACCCTAA GTCTGAAAGCAGGCTGGCTTTACTAAACCTAAACATATACGTGCCAAGGGACGAGCGATT TAGCCATGTGAAGTTTTCAGACTTCCTCGCTTATGCACTCAAGTCCGTGACTCAAGTGCT TGTCCCTGAGATCGCCTCTGTTTGCGACAAGACCATCAACGAGTTTGACTCCTTCGAAGA TGTTTTTCACCTCTATGACGGTAGTATTAAGCTCGCCAATGGTCACACCATTTCTAAGCT CCGTGATGTTATCCCGTGGGAGATGTTTAGAGAGCTAGTTCGCAACGACGGAGAACGGTT CTTGAAGTATCCCTTGCCTGACATCCTCAAAGAGAGCAGATCGGCTTGGAGGACTGACGA AGAGTTTGCTCGAGAAATGCTGGCCGGTCTTAATCCGGTGGTGATTAGCCGTCTTCAGGA ATTTCCACCAAAGAGCTGTCTGGACTCTGCAAAGTATGGAAACCAACACTCTTCCATACG AACAGAGCACATAGAATCAAACATGAACGGCCTCAATGTCCAAGAAGCTTTGGAACAGAA TAAGCTATACATATTGGATCATCACGACGCATTGATGCCTTACCTGACACGGATAAACTC AACAAACACTAAAACCTATGCGACCCGAACCCTGCTGTTGCTTCAAGCAGACGGAACACT GAAGCCTCTCGCCATAGAGCTGAGTCTTCCACACGCACAAGGCGAATCATATGGATCGGT CAGCAAAGTTTTCACACCAGCAGAGAAAGGTGTCGAGGGATCGGTTTGGCAACTTGCTAA GGCTTATGCTGCGGTCAATGACTCTGGTTATCATCAGCTTATAAGCCATTGGTTGCAAAC GCATGCGGTGATTGAACCGTTCATAATCGCGTCCAATAGGCAGCTCAGCGTGGTCCATCC GATCCATAAACTTCTACATCCTCATTTCCGTGACACTATGAACATCAACGCATTAGCGCG TCATGTACTCATAAACTCAGACGGAGTTCTTGAGAGAACAGTCTTCCCTAGTCGATACGC CATGGAAATGTCTTCTTCAATTTACAAGAATTGGGTTTTCACCGAGCAGGCTCTCCCAAA AGACCTCCTCAAACGAGGAGTTGCTGTTGAAGATCCAAACAGTGACAACGGCGTTAAGCT TCTGATCGAAGATTACCCGTTTGCGGTCGACGGTTTAGAGATTTGGTCAGCGATCAAAAC ATGGGTCACAGAGTACTGCACATTCTACTACAATAATGACAAAACCGTCCAAACGGATAC AGAGATCCAATCATGGTGGACCGAGCTCCGAACCAAAGGCCACGGCGACAAACGACACGA GTCATGGTGGCCTTCGATGCAAACCCGCGACGACCTAATCGAAACCTGCACGATCATCAT CTGGATCGCCTCTGCTCTTCACGCAGCAGTAAATTTCGGACAGTACCCTTACGCCGGTTT TCTCCCTAACCGTCCTACCGTCAGCCGCCGGTTTATGCCTGAACCAGGTACGGATGAGTA TGCTGAGCTGGAGGAAGATGCTGACGTAGCGTTCTTGAAGACGATCACGCCGCAGTTACA GACTCTACTTGGTATCTCCATCATAGAGATATTGTCTATGCATTCAACGGACGAGATCTA CTTAGGGCAAAGAGATTCACCGAATTGGACGGCGGATGATGAGCCTTTGGAGGCGTTTAA GCGGTTTGGGAAAGAACTTGAGCTGATAGAGAACAATATTATACGAAGAAACAATGACAA GAGGTTCAAGAACAGAACCGGACCGGTTAACATACCGTACACATTGTTGTACCCGAATAC TACGGATTATACGAGAGAAGGTGGGATTACTGGGAAAGGGATCCCGAACAGTGTCTCAAT CTAAAGATAAACCCTCTCTCTCTTTAAGGTTTTTTTGAATTATTTATTTTTTATATTTTG GCTTTGCGTGTAATATTACTCTTATTTTTTTATTTTTATTTTTAATTATCATATATTACT CTTGTTATAATCCATGCAACAATTATTGTTTTGTTTTAAATTTTCTATATTTATAAATTT ACCTGAAC