Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G22270.1
CDS Infomation	\| Topoisomerase II-associated protein PAT1 \| Chr3:7874480-7877857 FORWARD LENGTH=2349 \| 201606
Sequence	ATGGAGAGATCTGATTCAAGGGATTTGTATAACTTTGTTCGCGCTTCTTCCTTAGATAAA AACAGTACACTCTTTGATGCATCACAATATGAGTTTTTTGGACAAAATCTGGATGATATG GAACTTGGGGGTCTTGATGATGATGGAGTAATCGCTCCTGTTCTTGGACATGCTGATGAT GATGAGTATCACTTGTTTGATAAAGGAGAGGGTGCAGGTTTAGGATCACTATCTGACATG GATGATCTTGCGACAACTTTCGCAAAGTTAAACAGAGTTGTTACCGGACCCAAACACCCT GGAGTTATTGGTGATAGAGGATCAGGATCCTTTTCAAGAGAGAGTTCTTCTGCTACCGAT TGGACACAAGATGCAGAGCTCACAAGCTGGTTGGACGAACAAGATCAAGAAGCTAAGAGA TGGTCCTCACAGCCACAATCATTTGCTCATTCAAAACCTTTGTACAGGACATCCTCTTAT CCTCAGCAGCAACCGCAGCTGCAGCACTACAATAGTGAACCGATAATTTTACCAGAATCA AATTTTACCTCATTTCCCCCGCCTGGTAACAGATCTCCGCAGGCTTCACCCGGAAATCTC CATCGCGCTCCTTCTCTTCCTGGTGGTTCTCAGTTGACCTATTCTGCACCTTCCCCGCTG TCAAATTCTGGTTTTCATCTTTCAGGATTGTCGCAAGGGCCCCACTATGGTGGTAATTTG ACTAGATATGCCTCGTGCGGTCCTACGCTTGGTAACATGGTGCAACCTCATTGGGTCACT GATCCTGGTCATCTACACGGAGATCATTCTGGTTTATTACATAATCTGGTGCAACAACAG CATCAACAATTGCCTCCTCGAAATGCTATTATGTCGCAACATTTGCTTGCCCTCCAGCAG AGACAATCATATGCTCAACTTGCAGCGCTACAGTCTCAACTGTATAGTTCCTATCCTTCG CCATCACGTAAAGTCCCTTTTGGAGTTGGTGAAGTTAGGGAACACAAACATAAGTCATCT CATAGAAGTCGAAAGAATAGAGGACTCTCTCAACAGACATCAGACGCAGCTAGTCAGAAA AGTGAAACTGGACTGCAGTTTAGATCAAAGCACATGACTTCAGAAGAAATAGAGAGTATA CTCAAGATGCAGCATTCCAATTCACACAGCAATGATCCCTATGTCAATGATTATTACCAC CAAGCGAAGCTTGCCAAGAAGTCTGCCGGATCTAAAGCAATCTCTCACTTCTATCCTGCT CAGTTGAAGGACCACCAGCCTCGGTCCCGTAATAGTTCTGAACAGCATCCACAAGTTCAT GTAGATGCTCTTGGTAAAATTACACTTCCATCTGTCCGCAGGCCACATGCCTTGCTTGAG GTTGACTCTTCTCCTGGTTTTAACGATGGAAGCGGGGATCATAAGGGCTCAGGAAAACAT TTGGAACAGGAACCTCTCGTTGCAGCTAGGGTTACAATTGAAGATGCTCTTGGAGTTCTT ATTGACATAGTTGACATTGACAGGACTCTCCAAAACACAAGACCCCAGGACGGAGGTGCC CAACTCAAGAGAAAGCGGCAGATCCTGCTAGAAGGATTAGCGACAGCACTTCAACTTGCT GATCCGTTCAGCAAAACCGGTCAGAAATCTGGGATGACTGCTAAGGATGATATTGTCTTT CTACGTATAGCGACTCTCCCCAAGGGTCGGAAATTGCTTACAAAGTATCTACAACTTCTA GTTCCAGGTACTGAGAATGCTCGAGTTGTCTGTATGGCTATATTCCGCCACTTGAGATTT CTGTTCGGCGGCCTACCTTCAGATACTCTAGCAGCAGAGACAATATCTAATCTTGCCAAA GCAGTCACGGTTTGCGTTCAGGCCATGGACCTTCGAGCACTGAGTGCTTGCCTTGCAGCT GTAGTATGTTCTTCAGAGCAGCCACCTCTCCGTCCTATCGGAAGTTCTGCTGGAGATGGT GCTTCAGTTGTCTTGATATCTCTTCTTGAGAGAGCTGCGGAAGTAGTGGTGGTTCCTCGA GTCATGCATGGGAATTCTAATGATGGTCTCTGGAGAGCGTCATTTGATGAATTCTTCAAC CTTCTTACCAAATACTGCAGAAGCAAGTATGACACAATCCGTGGACAGAACCAAGGGAGT GCAGCGGATGTTTTGGAGCTGGCGATAAAGAGGGAAATGCCCGCTGAGCTTTTACGTGCG AGTCTGCGTCACACCAATGACGACCAGAGGAACTATTTATTAAACTTTGGTCGTAAACCA TCAGCAATTAGTGAGTCGGCATCTCATGCAAGGGGTGGACAGATCAACTCTGAATCTGTG AGGGGTTAA

Peptide Sequence

PEP ID	AT3G22270.1
PEP Infomation	\| Topoisomerase II-associated protein PAT1 \| Chr3:7874480-7877857 FORWARD LENGTH=782 \| 201606
Sequence	MERSDSRDLYNFVRASSLDKNSTLFDASQYEFFGQNLDDMELGGLDDDGVIAPVLGHADD DEYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRESSSATD WTQDAELTSWLDEQDQEAKRWSSQPQSFAHSKPLYRTSSYPQQQPQLQHYNSEPIILPES NFTSFPPPGNRSPQASPGNLHRAPSLPGGSQLTYSAPSPLSNSGFHLSGLSQGPHYGGNL TRYASCGPTLGNMVQPHWVTDPGHLHGDHSGLLHNLVQQQHQQLPPRNAIMSQHLLALQQ RQSYAQLAALQSQLYSSYPSPSRKVPFGVGEVREHKHKSSHRSRKNRGLSQQTSDAASQK SETGLQFRSKHMTSEEIESILKMQHSNSHSNDPYVNDYYHQAKLAKKSAGSKAISHFYPA QLKDHQPRSRNSSEQHPQVHVDALGKITLPSVRRPHALLEVDSSPGFNDGSGDHKGSGKH LEQEPLVAARVTIEDALGVLIDIVDIDRTLQNTRPQDGGAQLKRKRQILLEGLATALQLA DPFSKTGQKSGMTAKDDIVFLRIATLPKGRKLLTKYLQLLVPGTENARVVCMAIFRHLRF LFGGLPSDTLAAETISNLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSAGDG ASVVLISLLERAAEVVVVPRVMHGNSNDGLWRASFDEFFNLLTKYCRSKYDTIRGQNQGS AADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAISESASHARGGQINSESV RG

Transcript Sequence

Transcript ID	AT3G22270.1
Transcript Infomation	\| Topoisomerase II-associated protein PAT1 \| Chr3:7874145-7878812 FORWARD LENGTH=3639 \| 201606
Sequence	ATGTTACACACGGCCAAGGAAACAGAACAAGAACAAATAAAGGCCATTGCTTTCTTCTTC CCTTCCCCTTCTCTTCATTGCCCTTCTCTCTCTCTTTTTTATCGCGGAGAGAGTTTTATA GATTTCTCCTTCTTCAACTTTACTTGCGTTTCTTTGTTTTATCAATTCGAAAACCCTAGC AGCAATCTCTGCTGATTTCACTTACCCACCTCGAATTTTGTTGTTCTATCTCCTTCACAA AGCACCACCTATCTGAAACCCTAGGGGAAGAGGATTCTCTCTTATGTCCTCTTCTGTTAT CTTCTCTTACCTCTAAAGTTTCGTTTATTTCGATCATGGAGAGATCTGATTCAAGGGATT TGTATAACTTTGTTCGCGCTTCTTCCTTAGATAAAAACAGTACACTCTTTGATGCATCAC AATATGAGTTTTTTGGACAAAATCTGGATGATATGGAACTTGGGGGTCTTGATGATGATG GAGTAATCGCTCCTGTTCTTGGACATGCTGATGATGATGAGTATCACTTGTTTGATAAAG GAGAGGGTGCAGGTTTAGGATCACTATCTGACATGGATGATCTTGCGACAACTTTCGCAA AGTTAAACAGAGTTGTTACCGGACCCAAACACCCTGGAGTTATTGGTGATAGAGGATCAG GATCCTTTTCAAGAGAGAGTTCTTCTGCTACCGATTGGACACAAGATGCAGAGCTCACAA GCTGGTTGGACGAACAAGATCAAGAAGCTAAGAGATGGTCCTCACAGCCACAATCATTTG CTCATTCAAAACCTTTGTACAGGACATCCTCTTATCCTCAGCAGCAACCGCAGCTGCAGC ACTACAATAGTGAACCGATAATTTTACCAGAATCAAATTTTACCTCATTTCCCCCGCCTG GTAACAGATCTCCGCAGGCTTCACCCGGAAATCTCCATCGCGCTCCTTCTCTTCCTGGTG GTTCTCAGTTGACCTATTCTGCACCTTCCCCGCTGTCAAATTCTGGTTTTCATCTTTCAG GATTGTCGCAAGGGCCCCACTATGGTGGTAATTTGACTAGATATGCCTCGTGCGGTCCTA CGCTTGGTAACATGGTGCAACCTCATTGGGTCACTGATCCTGGTCATCTACACGGAGATC ATTCTGGTTTATTACATAATCTGGTGCAACAACAGCATCAACAATTGCCTCCTCGAAATG CTATTATGTCGCAACATTTGCTTGCCCTCCAGCAGAGACAATCATATGCTCAACTTGCAG CGCTACAGTCTCAACTGTATAGTTCCTATCCTTCGCCATCACGTAAAGTCCCTTTTGGAG TTGGTGAAGTTAGGGAACACAAACATAAGTCATCTCATAGAAGTCGAAAGAATAGAGGAC TCTCTCAACAGACATCAGACGCAGCTAGTCAGAAAAGTGAAACTGGACTGCAGTTTAGAT CAAAGCACATGACTTCAGAAGAAATAGAGAGTATACTCAAGATGCAGCATTCCAATTCAC ACAGCAATGATCCCTATGTCAATGATTATTACCACCAAGCGAAGCTTGCCAAGAAGTCTG CCGGATCTAAAGCAATCTCTCACTTCTATCCTGCTCAGTTGAAGGACCACCAGCCTCGGT CCCGTAATAGTTCTGAACAGCATCCACAAGTTCATGTAGATGCTCTTGGTAAAATTACAC TTCCATCTGTCCGCAGGCCACATGCCTTGCTTGAGGTTGACTCTTCTCCTGGTTTTAACG ATGGAAGCGGGGATCATAAGGGCTCAGGAAAACATTTGGAACAGGAACCTCTCGTTGCAG CTAGGGTTACAATTGAAGATGCTCTTGGAGTTCTTATTGACATAGTTGACATTGACAGGA CTCTCCAAAACACAAGACCCCAGGACGGAGGTGCCCAACTCAAGAGAAAGCGGCAGATCC TGCTAGAAGGATTAGCGACAGCACTTCAACTTGCTGATCCGTTCAGCAAAACCGGTCAGA AATCTGGGATGACTGCTAAGGATGATATTGTCTTTCTACGTATAGCGACTCTCCCCAAGG GTCGGAAATTGCTTACAAAGTATCTACAACTTCTAGTTCCAGGTACTGAGAATGCTCGAG TTGTCTGTATGGCTATATTCCGCCACTTGAGATTTCTGTTCGGCGGCCTACCTTCAGATA CTCTAGCAGCAGAGACAATATCTAATCTTGCCAAAGCAGTCACGGTTTGCGTTCAGGCCA TGGACCTTCGAGCACTGAGTGCTTGCCTTGCAGCTGTAGTATGTTCTTCAGAGCAGCCAC CTCTCCGTCCTATCGGAAGTTCTGCTGGAGATGGTGCTTCAGTTGTCTTGATATCTCTTC TTGAGAGAGCTGCGGAAGTAGTGGTGGTTCCTCGAGTCATGCATGGGAATTCTAATGATG GTCTCTGGAGAGCGTCATTTGATGAATTCTTCAACCTTCTTACCAAATACTGCAGAAGCA AGTATGACACAATCCGTGGACAGAACCAAGGGAGTGCAGCGGATGTTTTGGAGCTGGCGA TAAAGAGGGAAATGCCCGCTGAGCTTTTACGTGCGAGTCTGCGTCACACCAATGACGACC AGAGGAACTATTTATTAAACTTTGGTCGTAAACCATCAGCAATTAGTGAGTCGGCATCTC ATGCAAGGGGTGGACAGATCAACTCTGAATCTGTGAGGGGTTAATAAAAAAGAAAGAGAA ACCATGTGCTTGGAAGATTCCAATTCTTGGTTTTCATGGCTGTGGTGTGGACTCAGGAGA CAAACTTGTAAGTAACCTGGTGGTGTAGGAATCTTTTCACAAGGGTTTCAGGTGAAAAGT GCTTTTAGATTCTGCTCTTCGTCTTCGTTTTTTAACTTTGAACTCTTTTATATTTCGTAT TATCTTTTATGGTGGACAAATGCATATTCTGCTTGGTTTGTGTATTGGATGATGGGAAAG AATGTGAAACATGGAGTAGTAGGGTTATCTGAAGAAGTAATGTCTTCCGATGGGAGCCAT ATTTTGGTGCTCTAAATCGTTAGGGAAACAAAAATAGGAGGGAACTTTAGTAGTTTGGGA AGGATACTAGTGTTTTGTGTACAGAATGATGATAAAACCCTTTATCCGGAGAATAGTGAG AAGACTATATAGGTGTTAATCCTCTTCGATTAACAGGTTTAGGTCCGGAAAGCAGCTGGG AATCTGGGATAGGGAGTTCAAAAGTTTGTTATCTGATATGTTTATTTCCTCTTTGAACTG TTTCGTGTAATAGTAGTAGGAACTCACAAAAACCCTCTTTTGAATACTCTTGGATCCATC TCTCTCGTTGGTTGTTTCAAGATTCCATCTTCTAGGCTCTTCTACCTTTTTTGTGATGAG CTTTAAGTACAACACTAAGATCCAACTGGTTTTGTTGTCCTTGTAGAATCTTTGGTTTGA CTAGTGATTGTTGGAATCATTTGGCCCTTCTATTTGACAGAATCTTTAAGTTACTATAAT AAGGATCTTACAGAAATTGATTTTCTATACTACAAAATTTCTGTAATGGTAATGACCAAG GGCCGATGATGAGTGACTCGTAAACTACTAGAATTCACTAAAGCTAGTGATATACTTTGT TCATTCTATTCTTTGGTGGATCCAGCGAGTTAAATGCGT