Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G21500.3
CDS Infomation	\| 1-deoxy-D-xylulose 5-phosphate synthase 1 \| Chr3:7573825-7576594 REVERSE LENGTH=2034 \| 201606
Sequence	ATGTCATATCAAACACAGATTAACAAATTCTCTCAAATGGCTCTCTCCGTATTTGCCTTT CCTTCTTACATAAATAGGAATCCTTCACTAAAATATCTTAAACCTTCTTCTATGTCTTCT ACAAAATATTCAAAAGTAAGAGCAACAACATTTTCAGAGAAAGGTGAATATTATTCAAAC AGACCACCAACTCCTTTATTGGACACAATCAACCATCCAATGCACATGAAAAATCTCTCC ATCAAAGAACTCAAAGTTCTTTCGGACGAGTTGAGATCTGATGTTATTTTTAATGTTTCG AAAACTGGAGGACACTTGGGTTCGAATCTTGGTGTTGTTGAGCTCACCGTGGCCCTTCAT TACATCTTCAATACTCCTCATGATAAGATCCTTTGGGATGTTGGTCATCAGTCTTATCCT CACAAGATTCTAACGGGAAGAAGAGGAAAGATGAAGACAATAAGGCAGACCAATGGCCTC TCCGGCTACACCAAGCGAAGAGAGAGTGAGCATGACTCTTTTGGCACCGGGCACAGTTCG ACCACACTATCTGCAGGCTTAGGGATGGCTGTAGGGAGGGATTTGAAGGGGATGAACAAC AGCGTGGTTTCGGTTATAGGCGATGGTGCTATGACAGCTGGACAAGCTTATGAAGCAATG AACAATGCTGGCTACTTACACTCCAACATGATTGTGATTCTCAACGACAACAAACAAGTA TCTTTGCCTACTGCTAACTTGGATGGACCAACTCAACCTGTTGGAGCTCTGAGCTGTGCT CTTAGTAGGCTGCAATCTAATTGTGGAATGATTAGAGAGACTAGTTCAACACTGTTTGAA GAACTTGGTTTTCACTATGTTGGTCCAGTTGATGGACACAACATAGATGATCTGGTCTCC ATTCTTGAAACATTAAAGAGCACCAAAACCATAGGACCGGTTCTTATCCATGTCGTGACT GAGAAAGGTCGTGGATATCCTTACGCAGAGAGAGCTGATGACAAGTATCATGGAGTTTTA AAATTTGATCCAGAAACAGGTAAACAGTTCAAAAATATTTCCAAGACTCAGTCTTACACT TCCTGTTTTGTGGAGGCCTTGATTGCAGAAGCAGAGGCAGACAAAGATATTGTTGCCATT CATGCAGCCATGGGAGGTGGAACCATGTTGAATCTCTTCGAAAGCCGCTTTCCTACAAGG TGTTTCGATGTCGGCATAGCAGAACAACATGCAGTTACCTTCGCTGCTGGTCTTGCTTGC GAAGGACTTAAGCCCTTTTGTACAATCTACTCATCTTTCATGCAACGGGCATATGATCAA GTTGTACATGATGTTGATCTACAGAAACTGCCTGTGAGATTTGCAATAGATAGAGCAGGA CTTATGGGAGCAGATGGTCCAACACATTGTGGAGCATTTGATGTGACGTTTATGGCATGT CTACCAAACATGATAGTAATGGCTCCATCTGATGAAGCAGAGCTTTTTAACATGGTTGCA ACCGCTGCAGCTATTGATGACCGTCCTTCTTGCTTTCGATATCATAGAGGAAATGGTATT GGTGTTTCACTTCCTCCTGGTAACAAAGGTGTCCCTCTTCAGATTGGGAGAGGTAGGATA CTAAGGGACGGCGAGAGGGTTGCGCTTTTGGGCTATGGATCAGCGGTGCAAAGATGTTTA GAGGCTGCATCTATGCTAAGCGAACGCGGATTAAAGATAACAGTAGCGGATGCAAGATTC TGTAAGCCGTTAGATGTTGCTCTCATTCGTAGCTTAGCTAAATCACACGAGGTTTTGATC ACGGTTGAAGAAGGTTCCATTGGAGGATTTGGATCGCATGTGGTACAATTTCTTGCACTT GATGGCCTTCTTGATGGAAAGCTCAAGTGGAGACCAATGGTACTACCTGACAGGTATATC GAACATGGATCACCAATGGATCAACTAGCTGAAGCTGGCCTCACAGCGTCTCACATTGCA GCCACTGCACTTAACTTAATGGGAACACCTAGAGAAGCATTGTTTTGGGAGTAA

Peptide Sequence

PEP ID	AT3G21500.3
PEP Infomation	\| 1-deoxy-D-xylulose 5-phosphate synthase 1 \| Chr3:7573825-7576594 REVERSE LENGTH=677 \| 201606
Sequence	MSYQTQINKFSQMALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFSEKGEYYSN RPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALH YIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSS TTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQV SLPTANLDGPTQPVGALSCALSRLQSNCGMIRETSSTLFEELGFHYVGPVDGHNIDDLVS ILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYT SCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLAC EGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMAC LPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRI LRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLI TVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIEHGSPMDQLAEAGLTASHIA ATALNLMGTPREALFWE

Transcript Sequence

Transcript ID	AT3G21500.3
Transcript Infomation	\| 1-deoxy-D-xylulose 5-phosphate synthase 1 \| Chr3:7573560-7576721 REVERSE LENGTH=2426 \| 201606
Sequence	AAGCTATTCTCTAAAATTTTGATATTAAATTTGTACAAAATACATTTCTACGTGGATTTA AGGTGTTAAAAGAGTTCGATTAGTAAGCTTTACATTTTATTGATACTACCACTATATATA CGTTGGAATGTCATATCAAACACAGATTAACAAATTCTCTCAAATGGCTCTCTCCGTATT TGCCTTTCCTTCTTACATAAATAGGAATCCTTCACTAAAATATCTTAAACCTTCTTCTAT GTCTTCTACAAAATATTCAAAAGTAAGAGCAACAACATTTTCAGAGAAAGGTGAATATTA TTCAAACAGACCACCAACTCCTTTATTGGACACAATCAACCATCCAATGCACATGAAAAA TCTCTCCATCAAAGAACTCAAAGTTCTTTCGGACGAGTTGAGATCTGATGTTATTTTTAA TGTTTCGAAAACTGGAGGACACTTGGGTTCGAATCTTGGTGTTGTTGAGCTCACCGTGGC CCTTCATTACATCTTCAATACTCCTCATGATAAGATCCTTTGGGATGTTGGTCATCAGTC TTATCCTCACAAGATTCTAACGGGAAGAAGAGGAAAGATGAAGACAATAAGGCAGACCAA TGGCCTCTCCGGCTACACCAAGCGAAGAGAGAGTGAGCATGACTCTTTTGGCACCGGGCA CAGTTCGACCACACTATCTGCAGGCTTAGGGATGGCTGTAGGGAGGGATTTGAAGGGGAT GAACAACAGCGTGGTTTCGGTTATAGGCGATGGTGCTATGACAGCTGGACAAGCTTATGA AGCAATGAACAATGCTGGCTACTTACACTCCAACATGATTGTGATTCTCAACGACAACAA ACAAGTATCTTTGCCTACTGCTAACTTGGATGGACCAACTCAACCTGTTGGAGCTCTGAG CTGTGCTCTTAGTAGGCTGCAATCTAATTGTGGAATGATTAGAGAGACTAGTTCAACACT GTTTGAAGAACTTGGTTTTCACTATGTTGGTCCAGTTGATGGACACAACATAGATGATCT GGTCTCCATTCTTGAAACATTAAAGAGCACCAAAACCATAGGACCGGTTCTTATCCATGT CGTGACTGAGAAAGGTCGTGGATATCCTTACGCAGAGAGAGCTGATGACAAGTATCATGG AGTTTTAAAATTTGATCCAGAAACAGGTAAACAGTTCAAAAATATTTCCAAGACTCAGTC TTACACTTCCTGTTTTGTGGAGGCCTTGATTGCAGAAGCAGAGGCAGACAAAGATATTGT TGCCATTCATGCAGCCATGGGAGGTGGAACCATGTTGAATCTCTTCGAAAGCCGCTTTCC TACAAGGTGTTTCGATGTCGGCATAGCAGAACAACATGCAGTTACCTTCGCTGCTGGTCT TGCTTGCGAAGGACTTAAGCCCTTTTGTACAATCTACTCATCTTTCATGCAACGGGCATA TGATCAAGTTGTACATGATGTTGATCTACAGAAACTGCCTGTGAGATTTGCAATAGATAG AGCAGGACTTATGGGAGCAGATGGTCCAACACATTGTGGAGCATTTGATGTGACGTTTAT GGCATGTCTACCAAACATGATAGTAATGGCTCCATCTGATGAAGCAGAGCTTTTTAACAT GGTTGCAACCGCTGCAGCTATTGATGACCGTCCTTCTTGCTTTCGATATCATAGAGGAAA TGGTATTGGTGTTTCACTTCCTCCTGGTAACAAAGGTGTCCCTCTTCAGATTGGGAGAGG TAGGATACTAAGGGACGGCGAGAGGGTTGCGCTTTTGGGCTATGGATCAGCGGTGCAAAG ATGTTTAGAGGCTGCATCTATGCTAAGCGAACGCGGATTAAAGATAACAGTAGCGGATGC AAGATTCTGTAAGCCGTTAGATGTTGCTCTCATTCGTAGCTTAGCTAAATCACACGAGGT TTTGATCACGGTTGAAGAAGGTTCCATTGGAGGATTTGGATCGCATGTGGTACAATTTCT TGCACTTGATGGCCTTCTTGATGGAAAGCTCAAGTGGAGACCAATGGTACTACCTGACAG GTATATCGAACATGGATCACCAATGGATCAACTAGCTGAAGCTGGCCTCACAGCGTCTCA CATTGCAGCCACTGCACTTAACTTAATGGGAACACCTAGAGAAGCATTGTTTTGGGAGTA ACGGGATCTCCATGAGAGTGCTCTTTCCACAAAAAACCTATATCGAGAGAACCCGCTTAG AAGAAGGATATATTATAGTTATATAACATCTTGAATAAATTCATTCACATTCAAGAATGA TTTTGTGTGTATTGCTTATATCTCGTTTCAACTAGGCTAAGAAATAGAACAAATGGCTTT GACGTTTTCATCACTAAACACCATAAATTTCTCCATCTCCCAATCACAAAACCCGAACAT CGACTGATCCCCTAAACAAATCGATT