Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G21330.1
CDS Infomation	\| basic helix-loop-helix (bHLH) DNA-binding superfamily protein \| Chr3:7507720-7508841 FORWARD LENGTH=1122 \| 201606
Sequence	ATGGAAGGATTGGAATCTGTGTACGCTCAAGCTATGTATGGAATGACACGAGAGAGCAAA ATCATGGAGCATCAAGGATCAGATTTGATTTGGGGAGGAAATGAGCTAATGGCTCGAGAA CTCTGTTCTTCTTCTTCTTATCACCACCAACTCATTAATCCGAATCTTAGCAGCTGTTTC ATGTCTGATCTTGGAGTCTTAGGTGAGATTCAACAGCAGCAACATGTTGGCAACAGAGCT AGCTCGATAGATCCATCATCACTCGATTGTTTGTTATCTGCGACGTCGAATAGCAACAAC ACCTCGACGGAGGACGATGAAGGAATATCTGTGCTTTTCTCAGATTGTCAGACTCTTTGG AGCTTTGGTGGAGTCTCATCTGCAGAGTCTGAGAACAGAGAGATCACTACTGAGACGACA ACAACGATAAAGCCTAAGCCTTTGAAGAGAAACAGAGGAGGAGATGGAGGAACTACTGAG ACTACAACAACAACAACAAAACCTAAGTCTTTGAAGAGAAACAGAGGAGACGAGACAGGA AGTCACTTTAGTCTTGTTCATCCTCAAGATGATTCGGAGAAAGGAGGTTTCAAGCTTATA TACGATGAGAATCAATCGAAATCAAAGAAACCAAGAACAGAGAAAGAACGAGGCGGTTCT TCGAACATTAGTTTCCAACATTCAACTTGTTTGTCTGACAATGTCGAGCCCGATGCTGAG GCGATTGCACAAATGAAGGAGATGATATACAGAGCGGCTGCATTTAGACCGGTGAATTTC GGGTTAGAGATTGTGGAGAAGCCTAAGAGGAAGAACGTCAAGATATCGACGGATCCTCAA ACGGTTGCAGCGAGACAGAGAAGGGAGAGGATAAGTGAGAAGATTAGGGTTTTACAAACA TTGGTTCCAGGTGGGACGAAGATGGATACTGCATCAATGCTTGATGAAGCTGCTAATTAT CTCAAGTTCCTTAGAGCACAAGTAAAAGCTTTAGAAAACTTGAGACCCAAGCTTGACCAA ACCAATCTCTCTTTCTCTTCTGCTCCTACATCGTTTCCATTATTCCACCCATCTTTTCTT CCATTGCAAAATCCTAATCAAATCCATCATCCAGAGTGTTGA

Peptide Sequence

PEP ID	AT3G21330.1
PEP Infomation	\| basic helix-loop-helix (bHLH) DNA-binding superfamily protein \| Chr3:7507720-7508841 FORWARD LENGTH=373 \| 201606
Sequence	MEGLESVYAQAMYGMTRESKIMEHQGSDLIWGGNELMARELCSSSSYHHQLINPNLSSCF MSDLGVLGEIQQQQHVGNRASSIDPSSLDCLLSATSNSNNTSTEDDEGISVLFSDCQTLW SFGGVSSAESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTTKPKSLKRNRGDETG SHFSLVHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEPDAE AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSFL PLQNPNQIHHPEC

Transcript Sequence

Transcript ID	AT3G21330.1
Transcript Infomation	\| basic helix-loop-helix (bHLH) DNA-binding superfamily protein \| Chr3:7507240-7509186 FORWARD LENGTH=1814 \| 201606
Sequence	ATGAATAGTAGGAGGGGTGTATAGGGCTTTCAAGTCTTTTCTTACAGAAACTATCTATAA CTCTAGCAGAGAGCTCATTATAGAACAGAACAGAAACAGAGCTTTCTAAGTCTACAGCAC AGAAATAAACCTCATTTACAGACTGTTTTACTTTCTTTCCTTTTTGAGCATTTCTTCTTT CTGTTTCTTTCCTCTGTTTTCTCTTTCTTTCCCTTTTTGGGTGTCATCTCTTTAAGACAG AAGAAACGTTTCTCAGAGTTTCCTGTGAACTCATCTGTTTGTTCTCTTCTTCCGGTTTCA CTTTTTCATGTCCTGCCGTTATTACAACGAGGATTGTGTTTGATCCGATGGAAGGATTGG AATCTGTGTACGCTCAAGCTATGTATGGAATGACACGAGAGAGCAAAATCATGGAGCATC AAGGATCAGATTTGATTTGGGGAGGAAATGAGCTAATGGCTCGAGAACTCTGTTCTTCTT CTTCTTATCACCACCAACTCATTAATCCGAATCTTAGCAGCTGTTTCATGTCTGATCTTG GAGTCTTAGGTGAGATTCAACAGCAGCAACATGTTGGCAACAGAGCTAGCTCGATAGATC CATCATCACTCGATTGTTTGTTATCTGCGACGTCGAATAGCAACAACACCTCGACGGAGG ACGATGAAGGAATATCTGTGCTTTTCTCAGATTGTCAGACTCTTTGGAGCTTTGGTGGAG TCTCATCTGCAGAGTCTGAGAACAGAGAGATCACTACTGAGACGACAACAACGATAAAGC CTAAGCCTTTGAAGAGAAACAGAGGAGGAGATGGAGGAACTACTGAGACTACAACAACAA CAACAAAACCTAAGTCTTTGAAGAGAAACAGAGGAGACGAGACAGGAAGTCACTTTAGTC TTGTTCATCCTCAAGATGATTCGGAGAAAGGAGGTTTCAAGCTTATATACGATGAGAATC AATCGAAATCAAAGAAACCAAGAACAGAGAAAGAACGAGGCGGTTCTTCGAACATTAGTT TCCAACATTCAACTTGTTTGTCTGACAATGTCGAGCCCGATGCTGAGGCGATTGCACAAA TGAAGGAGATGATATACAGAGCGGCTGCATTTAGACCGGTGAATTTCGGGTTAGAGATTG TGGAGAAGCCTAAGAGGAAGAACGTCAAGATATCGACGGATCCTCAAACGGTTGCAGCGA GACAGAGAAGGGAGAGGATAAGTGAGAAGATTAGGGTTTTACAAACATTGGTTCCAGGTG GGACGAAGATGGATACTGCATCAATGCTTGATGAAGCTGCTAATTATCTCAAGTTCCTTA GAGCACAAGTAAAAGCTTTAGAAAACTTGAGACCCAAGCTTGACCAAACCAATCTCTCTT TCTCTTCTGCTCCTACATCGTTTCCATTATTCCACCCATCTTTTCTTCCATTGCAAAATC CTAATCAAATCCATCATCCAGAGTGTTGACAGATTATAAACTTTTGAGTTTCATCATCAT CAACAGAATCATGGCGTCTTGATTGTTTTAGCAGTTCTCAAGAAAGGCAACTTCTGTGAC AAGGGTGGTGTCGGGCAGTGTTGTTTACACTTTCCAGTCTTTGTTTTGCATTTCTTTTTA TATAAAGTTTGTATTTTATATAGAATCTGTGGAATTCGAGGGTTGAAATATTGTGAAAAA CAGAGCCGCAAGAGGTTAATTACAGTCTCTGCAATATTTTCAACCTTTTATTACTTTATT AGAGTAAAGATAGCGTAAGATAATTGCAATTATGAAGCGATGATTATCAACAAAAGTGTT TAGAAAGTGCCTCC