Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G21000.1
CDS Infomation	\| Gag-Pol-related retrotransposon family protein \| Chr3:7363921-7365138 FORWARD LENGTH=1218 \| 201606
Sequence	ATGGCGACGGCGAATATACGCGACGGCGTTGTTTCCGATCAATTTGACTATGAAATCTGG GCTCCGATCACGAAATCTACACTAATCGAGCAAGGACTTTGGGATGTTGTCGTGAACGGA GTCCCGCAGGATCCATCGAAGAATCCAGAGTTAGCGGCGACGATTCAACCCGAAGAGCTT TCGAAATGGAGAGATTTCGTGGTGAAAGACGCTAAAGCGCTTCAGATCTTGCAATCTTCT CTCACGGATTCTGTTTTCAGGAAGACTCTCTCTGCTTCTTCGGCTAAAGATGTTTGGGAT TTGCTTCGAAAAGGTAACGAACAAGCAACGATACGTAGATTAGAACAAGTAACGATACGT CGATTAGAGAAGCAATTAGAAGATCTCAAAATGGTTGACAAAGAATCTGGCAGTTCCTAC TTGGATAAGGCTTTGGAAATCCTTGAACGATTGGGCCGTGCGAAACTTGAGAAATCTGAT TACGAGATTTGCAAGAATGTGTTCACGACACTCTCTGGGTCATTCGATGGTCTAGATTCA ATGTTGGAGGAACTCATTGATGTTCATAAGATGACTAGTAAGAGTCTTGTTGAGTATTTT TACTATCGTGTACATGAATCATCGACAGAGGAAGCTATCTTTGGACTATTGAAGGATTTG AGGCTTAAATCAAAGTCTGAGAAGTGGTGTGGCTTGTGCTACAAGAACAATCACAACCAA GAAGACTGCAAATTTAGGATTCATACAGATAAGGAGGAGAAAGAAGATGAAATCGTAGTT GATTATCGTCTGGAAACGGTACCAAATTTAGGGGCAAAAACATATGATGATGATATTTGG ATAATACACAAGATGGCCCCGATTAACATGACTCCATATGTGAAGTATTTCACCACTCTA GACAGGACATTCAAAGCTACGGTTGGAACGGTCGATGGAACAGTTCTTTTGGTTGAAGGA AAAGGAGATGTTAAGATCAGGATGAAGGAAGGGAAGAAGAAGACGATCAGGAATGTGATT TTTGTTCCCGGGCTCAACAGAAACGTGTTGAGTTTTGGTAAGATGGTATCAAAACGCTAC TCAATCTCAACGGGAATGCAAGGCGAATGCATTGTCTGCGATCGGGGTGAGAATAAATTG GGGGATGCTATGTGGATGACGGATGAAACAGAGATGGCTTTGCGTTTGAAGGTGATTGAA GGTAAACTCACATATTAA

Peptide Sequence

PEP ID	AT3G21000.1
PEP Infomation	\| Gag-Pol-related retrotransposon family protein \| Chr3:7363921-7365138 FORWARD LENGTH=405 \| 201606
Sequence	MATANIRDGVVSDQFDYEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEEL SKWRDFVVKDAKALQILQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIR RLEKQLEDLKMVDKESGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDS MLEELIDVHKMTSKSLVEYFYYRVHESSTEEAIFGLLKDLRLKSKSEKWCGLCYKNNHNQ EDCKFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTL DRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRY SISTGMQGECIVCDRGENKLGDAMWMTDETEMALRLKVIEGKLTY

Transcript Sequence

Transcript ID	AT3G21000.1
Transcript Infomation	\| Gag-Pol-related retrotransposon family protein \| Chr3:7363880-7365391 FORWARD LENGTH=1512 \| 201606
Sequence	GAGAAAAAAGAAAGTTTAAAGAATCTCTGACAGTTACGGTTATGGCGACGGCGAATATAC GCGACGGCGTTGTTTCCGATCAATTTGACTATGAAATCTGGGCTCCGATCACGAAATCTA CACTAATCGAGCAAGGACTTTGGGATGTTGTCGTGAACGGAGTCCCGCAGGATCCATCGA AGAATCCAGAGTTAGCGGCGACGATTCAACCCGAAGAGCTTTCGAAATGGAGAGATTTCG TGGTGAAAGACGCTAAAGCGCTTCAGATCTTGCAATCTTCTCTCACGGATTCTGTTTTCA GGAAGACTCTCTCTGCTTCTTCGGCTAAAGATGTTTGGGATTTGCTTCGAAAAGGTAACG AACAAGCAACGATACGTAGATTAGAACAAGTAACGATACGTCGATTAGAGAAGCAATTAG AAGATCTCAAAATGGTTGACAAAGAATCTGGCAGTTCCTACTTGGATAAGGCTTTGGAAA TCCTTGAACGATTGGGCCGTGCGAAACTTGAGAAATCTGATTACGAGATTTGCAAGAATG TGTTCACGACACTCTCTGGGTCATTCGATGGTCTAGATTCAATGTTGGAGGAACTCATTG ATGTTCATAAGATGACTAGTAAGAGTCTTGTTGAGTATTTTTACTATCGTGTACATGAAT CATCGACAGAGGAAGCTATCTTTGGACTATTGAAGGATTTGAGGCTTAAATCAAAGTCTG AGAAGTGGTGTGGCTTGTGCTACAAGAACAATCACAACCAAGAAGACTGCAAATTTAGGA TTCATACAGATAAGGAGGAGAAAGAAGATGAAATCGTAGTTGATTATCGTCTGGAAACGG TACCAAATTTAGGGGCAAAAACATATGATGATGATATTTGGATAATACACAAGATGGCCC CGATTAACATGACTCCATATGTGAAGTATTTCACCACTCTAGACAGGACATTCAAAGCTA CGGTTGGAACGGTCGATGGAACAGTTCTTTTGGTTGAAGGAAAAGGAGATGTTAAGATCA GGATGAAGGAAGGGAAGAAGAAGACGATCAGGAATGTGATTTTTGTTCCCGGGCTCAACA GAAACGTGTTGAGTTTTGGTAAGATGGTATCAAAACGCTACTCAATCTCAACGGGAATGC AAGGCGAATGCATTGTCTGCGATCGGGGTGAGAATAAATTGGGGGATGCTATGTGGATGA CGGATGAAACAGAGATGGCTTTGCGTTTGAAGGTGATTGAAGGTAAACTCACATATTAAG TAGCTACTTTTCATGATGGCTACAATTGGTAGTAGGCTTAACTCGTCAGGTGGACATATC AGTCTTCTATGTGGTCTTTTTTAGTTTGGTTTTATTCCGTTTTCAGTTTGTTCGAGCTAA TACATATTCTGCTACTGCAGTATGAATTAGTCTTTAACCTAGGAAGGCTTGGTTTTAATC TAGTTTTTCAAAAACTATTTTTGTCATCACTGTGCAAGTACTATTGTCAAGTTTTGTTAA TGGTGAGAAGGA