Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G20600.1
CDS Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7194877-7195536 FORWARD LENGTH=660 | 201606
Sequence

ATGAATAATCAAAATGAAGACACAGAAGGTGGTCGAAACTGTTGTACTTGCTGCTTAAGC
TTCATCTTCACAGCTGGTCTCACCTCTCTTTTCTTATGGCTTAGTCTCCGTGCGGACAAA
CCCAAATGCTCAATCCAAAACTTTTTCATTCCTGCCCTCGGAAAAGACCCAAATTCACGA
GACAATACCACTCTAAATTTCATGGTTCGTTGTGACAATCCGAATAAAGACAAAGGAATC
TACTACGACGATGTCCACCTTAATTTTTCCACCATCAACACGACCAAGATCAATTCATCT
GCTCTTGTCTTAGTTGGTAACTACACAGTGCCTAAGTTCTATCAAGGACACAAGAAGAAG
GCCAAGAAGTGGGGTCAAGTAAAGCCGCTAAACAACCAGACGGTTTTACGAGCGGTTTTG
CCTAATGGATCGGCTGTTTTCAGGTTGGATCTCAAGACTCAAGTTAGATTCAAGATTGTT
TTTTGGAAAACTAAGAGGTATGGGGTTGAAGTTGGAGCTGATGTTGAAGTCAACGGTGAT
GGAGTTAAAGCTCAGAAGAAAGGAATTAAGATGAAGAAATCTGATTCTTCTTTTCCATTA
AGAAGCTCTTTTCCGATTAGTGTTTTGATGAATTTACTCGTATTCTTTGCTATTCGTTAA

Peptide Sequence

PEP ID

AT3G20600.1
PEP Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7194877-7195536 FORWARD LENGTH=219 | 201606
Sequence

MNNQNEDTEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSR
DNTTLNFMVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKK
AKKWGQVKPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGD
GVKAQKKGIKMKKSDSSFPLRSSFPISVLMNLLVFFAIR

Transcript Sequence

Transcript ID

AT3G20600.1
Transcript Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7194771-7195769 FORWARD LENGTH=999 | 201606
Sequence

TTTTGAGTCAACTTGAAATATCAACCAATCAGCAAACCAAAATCTTATAACATCATCTTC
TTCATCTTTCCGACAAAAATACCAAATTCTTGAAAACAAAAAAAAAATGAATAATCAAAA
TGAAGACACAGAAGGTGGTCGAAACTGTTGTACTTGCTGCTTAAGCTTCATCTTCACAGC
TGGTCTCACCTCTCTTTTCTTATGGCTTAGTCTCCGTGCGGACAAACCCAAATGCTCAAT
CCAAAACTTTTTCATTCCTGCCCTCGGAAAAGACCCAAATTCACGAGACAATACCACTCT
AAATTTCATGGTTCGTTGTGACAATCCGAATAAAGACAAAGGAATCTACTACGACGATGT
CCACCTTAATTTTTCCACCATCAACACGACCAAGATCAATTCATCTGCTCTTGTCTTAGT
TGGTAACTACACAGTGCCTAAGTTCTATCAAGGACACAAGAAGAAGGCCAAGAAGTGGGG
TCAAGTAAAGCCGCTAAACAACCAGACGGTTTTACGAGCGGTTTTGCCTAATGGATCGGC
TGTTTTCAGGTTGGATCTCAAGACTCAAGTTAGATTCAAGATTGTTTTTTGGAAAACTAA
GAGGTATGGGGTTGAAGTTGGAGCTGATGTTGAAGTCAACGGTGATGGAGTTAAAGCTCA
GAAGAAAGGAATTAAGATGAAGAAATCTGATTCTTCTTTTCCATTAAGAAGCTCTTTTCC
GATTAGTGTTTTGATGAATTTACTCGTATTCTTTGCTATTCGTTAACTTCATTAATGGTG
TTGATTTTCAGGTTTTTCATTTCTTGGTTTTGTTGATTTTGATTATTGACTATTTCATGA
GTTTTGTTGTGATCCTTAGTTCCATTTTCTTCATTGCATAATTTATCCCTTATTTTTTTT
GTTTTAACTATGTATTAGTTTCCATCAACAAAATTCTATTTGAAAATCATTTTATCCATT
TTTTATATGTACAAGAAACAATTATATGTTGGGTTTCAA