Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G20590.1
CDS Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7191686-7192453 FORWARD LENGTH=768 | 201606
Sequence

ATGACAAAAATAGATCCAGAAGAAGAACTTGGTCGAAAATGTTGTACCTGCTTCTTCAAG
TTCATCTTCACAACTCGTCTCGGCGCTCTTATCTTATGGCTTAGTCTCCGTGCCAAGAAA
CCCAAATGCTCAATCCAAAACTTTTACATTCCTGCCCTCAGCAAAAACCTAAGCTCACGA
GACAATACCACTCTAAATTTCATGGTTCGTTGTGACAATCCGAATAAAGACAAAGGAATC
TACTACGACGATGTCCACCTTACTTTCTCCACCATCAACACGACCACGACCAATTCATCT
GATCTTGTCTTAGTCGCTAACTACACAGTGCCTAAGTTCTATCAAGGACACAAGAAGAAG
GCCAAGAAGTGGGGTCAAGTTTGGCCGCTAAACAACCAGACGGTTTTACGAGCTGTTTTG
CCTAATGGATCGGCGGTTTTCAGGCTGGATCTCAAGACTCATGTGAGATTCAAGATTGTT
TTTTGGAAAACTAAATGGTATAGGAGAATTAAAGTTGGTGCTGATGTTGAAGTCAACGGT
GATGGAGTTAAAGCTAATGAGAAAGAGATTAAGATGGAGAAATCTAATTTTTGGAAAACT
CATGGATATTGGAGTGAATTTGGTTTTGACGATGATGTTGAACTCACCGGTGATGGAGCT
CAAAAGAAAGGAAGTAAGACGAAGAAATCGGATTCTTCTTTACCATTAAGAAGCTCTTTT
CCGATTTTTGTTTTGATGAATTTGCTCGTATTCTTTGCTATTCGTTAA

Peptide Sequence

PEP ID

AT3G20590.1
PEP Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7191686-7192453 FORWARD LENGTH=255 | 201606
Sequence

MTKIDPEEELGRKCCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSR
DNTTLNFMVRCDNPNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKK
AKKWGQVWPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNG
DGVKANEKEIKMEKSNFWKTHGYWSEFGFDDDVELTGDGAQKKGSKTKKSDSSLPLRSSF
PIFVLMNLLVFFAIR

Transcript Sequence

Transcript ID

AT3G20590.1
Transcript Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr3:7191559-7192641 FORWARD LENGTH=1083 | 201606
Sequence

GTATCGCTAACTGTGCTAAATATTTTGGTATGACTTTGCCAGTCAGTTGGTCTATTAAAT
ATCATTTTCTTTGGGTCATAAAAACTATAACGATCTTCTTCAGCTTTCAGGCAAAAATAC
CAAAACCATGACAAAAATAGATCCAGAAGAAGAACTTGGTCGAAAATGTTGTACCTGCTT
CTTCAAGTTCATCTTCACAACTCGTCTCGGCGCTCTTATCTTATGGCTTAGTCTCCGTGC
CAAGAAACCCAAATGCTCAATCCAAAACTTTTACATTCCTGCCCTCAGCAAAAACCTAAG
CTCACGAGACAATACCACTCTAAATTTCATGGTTCGTTGTGACAATCCGAATAAAGACAA
AGGAATCTACTACGACGATGTCCACCTTACTTTCTCCACCATCAACACGACCACGACCAA
TTCATCTGATCTTGTCTTAGTCGCTAACTACACAGTGCCTAAGTTCTATCAAGGACACAA
GAAGAAGGCCAAGAAGTGGGGTCAAGTTTGGCCGCTAAACAACCAGACGGTTTTACGAGC
TGTTTTGCCTAATGGATCGGCGGTTTTCAGGCTGGATCTCAAGACTCATGTGAGATTCAA
GATTGTTTTTTGGAAAACTAAATGGTATAGGAGAATTAAAGTTGGTGCTGATGTTGAAGT
CAACGGTGATGGAGTTAAAGCTAATGAGAAAGAGATTAAGATGGAGAAATCTAATTTTTG
GAAAACTCATGGATATTGGAGTGAATTTGGTTTTGACGATGATGTTGAACTCACCGGTGA
TGGAGCTCAAAAGAAAGGAAGTAAGACGAAGAAATCGGATTCTTCTTTACCATTAAGAAG
CTCTTTTCCGATTTTTGTTTTGATGAATTTGCTCGTATTCTTTGCTATTCGTTAACTTGA
TTAGTGGTGTTTGATTTCAACTTTTGCTTTTGTTTTTGTTGATCTTGATTATTGACTCTT
TCATGAGTTTTGTTCTGTCCTAGTTCCATTTTCTTCATAGTTTCTAAATTCGACCAAGTA
CTCATTGCATTCCCTTGTTGTTTTTGTTTTAACTATGTACTAGTTTCCATCAATAAAATT
ATA