Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G19840.1
CDS Infomation	\| pre-mRNA-processing protein 40C \| Chr3:6891228-6897227 FORWARD LENGTH=2508 \| 201606
Sequence	ATGGAAGGGGAGAATACAACGGATCCGCCGTACACAACGGCGGCATCTTCGGGACAGAGT ATCTTCGTCCGTCCTCCTCCAATTGCTCCAGTCTTGGCTACTACTTCGAATTTCTCTCAG TCGGAGCTGAAGGAGCTACACTCTATGTCTATTGCTAGTACAGGTTTTGTCTCTCAGTCA GTTCCATATTCTGTTACTGCACAATGGGGTACTAATGCAGCAGCCTCCTCAAATGTTAAT CCCATACCTCAAGCTTCGCCCATGCTAGCAAATGCACCTTTTGGTCGACCAGGAACACTC GCCCCTCCTGGACTAATGACATCTCCGCCTGCTTTTCCTGGTTCCAACCCTTTTTCTACA ACGCCAAGACCTGGGATGTCTGCAGGTCCTGCTCAAATGAATCCTGGTATTCATCCGCAC ATGTATCCTCCATATCATTCACTGCCTGGAACGCCTCAAGGAATGTGGTTGCAGCCTCCT TCTATGGGTGGTATTCCCAGGGCACCTTTTCTTTCACATCCTACTACCTTTCCTGGTTCA TATCCATTTCCAGTTCGTGGAATCTCCCCTAACCTACCATATTCTGGTTCTCATCCGCTT GGTGCCAGTCCTATGGGAAGTGTTGGCAATGTTCATGCATTACCAGGTCGTCAGCCTGAT ATATCTCCCGGGCGAAAGACAGAAGAACTCTCAGGAATCGATGACAGAGCTGGTTCTCAA CTAGTAGGAAATCGGTTAGATGCCTGGACTGCACATAAATCAGAAGCAGGAGTTCTTTAC TACTATAATTCCGTTACAGGGCAATCGACCTACGAAAAGCCTCCTGGTTTTGGAGGGGAG CCTGATAAAGTGCCAGTGCAGCCAATTCCTGTTTCAATGGAGAGTTTACCTGGGACGGAT TGGGCTCTTGTGTCCACAAACGACGGCAAAAAGTATTACTATAACAATAAAACAAAGGTC AGCAGCTGGCAGATTCCTGCAGAAGTAAAAGATTTCGGGAAGAAACTAGAGGAGAGGGCT ATGGAGAGTGTAGCATCAGTGCCTAGTGCTGATTTAACTGAAAAGGGTTCTGATCTAACA AGTTTGAGCGCACCTGCTATTAGCAATGGTGGCCGGGATGCTGCATCTCTAAAAACTACA AATTTTGGTTCGTCCGCGCTGGATTTGGTTAAAAAGAAACTACATGATTCTGGAATGCCT GTCTCATCTACGATAACATCTGAAGCAAATAGTGGTAAAACAACTGAGGTCACACCCAGT GGAGAAAGTGGAAATAGTACGGGTAAGGTGAAAGATGCTCCTGGAGCTGGGGCCCTTTCC GATTCTTCTTCAGATTCGGAAGATGAAGATAGTGGACCATCGAAGGAAGAGTGTTCTAAA CAGTTTAAGGAAATGCTGAAAGAGAGAGGAATAGCACCGTTTTCTAAATGGGAGAAGGAA TTGCCAAAAATTATCTTTGACCCTCGCTTTAAGGCAATACCAAGTCATTCTGTTAGAAGA TCATTATTTGAGCAGTACGTAAAGACACGAGCTGAGGAAGAACGTAGGGAAAAGCGTGCT GCTCATAAGGCAGCTATTGAAGGTTTCAGGCAGTTGCTGGATGATGCGTCTACGGACATT GATCAACACACTGACTATCGTGCTTTTAAAAAGAAATGGGGGAATGATCTCCGGTTCGAA GCAATTGAGCGTAAGGAGCGGGAGGGTTTACTGAATGAAAGAGTCCTTTCTTTGAAACGA AGTGCTGAACAAAAGGCACAAGAAATTCGCGCTGCTGCTGCCTCTGATTTCAAGACAATG CTACGGGAAAGAGAAATATCAATAAATTCACATTGGTCCAAGGTGAAGGATAGTCTGAGA AATGAACCAAGATATAGATCCGTTGCGCACGAGGATAGGGAGGTTTTTTATTATGAGTAC ATTGCGGAACTAAAAGCTGCACAAAGGGGAGATGATCATGAGATGAAAGCCAGAGACGAA GAGGACAAACTGAGGGAACGGGAGCGTGAGTTGCGGAAACGCAAAGAAAGAGAAGTGCAA GAGGTGGAAAGGGTACGACAAAAAATTAGAAGGAAAGAGGCAAGCTCCTCTTATCAAGCT TTGTTAGTGGAAAAAATCAGAGACCCTGAGGCATCATGGACGGAATCTAAGCCAATACTT GAGAGGGATCCTCAAAAACGTGCCTCTAATCCAGACTTAGAACCTGCTGATAAAGAGAAG CTATTCCGAGACCACGTAAAGTCATTATATGAGCGATGTGTTCATGACTTCAAAGCTCTT CTAGCTGAAGCGTTGTCATCTGAAGCAGCTACTCTACAAACAGAAGATGGAAAGACTGCG CTTAATTCTTGGTCAACGGCTAAACAAGTACTGAAACCCGATATCAGGTACAGCAAGATG CCGAGGCAAGATAGGGAAGTCGTATGGCGTCGATATGTTGAGGATATATCGAGGAAACAG AGACATGAAAACTATCAGGAGGAGAAACAACGAGATTACAAGACCTAA

Peptide Sequence

PEP ID	AT3G19840.1
PEP Infomation	\| pre-mRNA-processing protein 40C \| Chr3:6891228-6897227 FORWARD LENGTH=835 \| 201606
Sequence	MEGENTTDPPYTTAASSGQSIFVRPPPIAPVLATTSNFSQSELKELHSMSIASTGFVSQS VPYSVTAQWGTNAAASSNVNPIPQASPMLANAPFGRPGTLAPPGLMTSPPAFPGSNPFST TPRPGMSAGPAQMNPGIHPHMYPPYHSLPGTPQGMWLQPPSMGGIPRAPFLSHPTTFPGS YPFPVRGISPNLPYSGSHPLGASPMGSVGNVHALPGRQPDISPGRKTEELSGIDDRAGSQ LVGNRLDAWTAHKSEAGVLYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTD WALVSTNDGKKYYYNNKTKVSSWQIPAEVKDFGKKLEERAMESVASVPSADLTEKGSDLT SLSAPAISNGGRDAASLKTTNFGSSALDLVKKKLHDSGMPVSSTITSEANSGKTTEVTPS GESGNSTGKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKE LPKIIFDPRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDI DQHTDYRAFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTM LREREISINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDE EDKLRERERELRKRKEREVQEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPIL ERDPQKRASNPDLEPADKEKLFRDHVKSLYERCVHDFKALLAEALSSEAATLQTEDGKTA LNSWSTAKQVLKPDIRYSKMPRQDREVVWRRYVEDISRKQRHENYQEEKQRDYKT

Transcript Sequence

Transcript ID	AT3G19840.1
Transcript Infomation	\| pre-mRNA-processing protein 40C \| Chr3:6890988-6897510 FORWARD LENGTH=3031 \| 201606
Sequence	CTTTCTTCCTTTTCCCCCGGAACGTAATCTCAGCCGTCCATCCTTTCTATCATCCTACGA TCTATCTAAACCGTCGGCTGAACTTCGTTCTCCTGAATCGCGCGACATCGACATCTTCTG ATTCTTCCTCACTAGTTTTTTCCTAAACCCTAACTTCTTCGTTCGCGTCGACGAAGCTGC TGGCAATTTCTCGTCGGAAACTATTACTCGATACCACCACCTGTTTAGTCTTTAAAGGTA ATGGAAGGGGAGAATACAACGGATCCGCCGTACACAACGGCGGCATCTTCGGGACAGAGT ATCTTCGTCCGTCCTCCTCCAATTGCTCCAGTCTTGGCTACTACTTCGAATTTCTCTCAG TCGGAGCTGAAGGAGCTACACTCTATGTCTATTGCTAGTACAGGTTTTGTCTCTCAGTCA GTTCCATATTCTGTTACTGCACAATGGGGTACTAATGCAGCAGCCTCCTCAAATGTTAAT CCCATACCTCAAGCTTCGCCCATGCTAGCAAATGCACCTTTTGGTCGACCAGGAACACTC GCCCCTCCTGGACTAATGACATCTCCGCCTGCTTTTCCTGGTTCCAACCCTTTTTCTACA ACGCCAAGACCTGGGATGTCTGCAGGTCCTGCTCAAATGAATCCTGGTATTCATCCGCAC ATGTATCCTCCATATCATTCACTGCCTGGAACGCCTCAAGGAATGTGGTTGCAGCCTCCT TCTATGGGTGGTATTCCCAGGGCACCTTTTCTTTCACATCCTACTACCTTTCCTGGTTCA TATCCATTTCCAGTTCGTGGAATCTCCCCTAACCTACCATATTCTGGTTCTCATCCGCTT GGTGCCAGTCCTATGGGAAGTGTTGGCAATGTTCATGCATTACCAGGTCGTCAGCCTGAT ATATCTCCCGGGCGAAAGACAGAAGAACTCTCAGGAATCGATGACAGAGCTGGTTCTCAA CTAGTAGGAAATCGGTTAGATGCCTGGACTGCACATAAATCAGAAGCAGGAGTTCTTTAC TACTATAATTCCGTTACAGGGCAATCGACCTACGAAAAGCCTCCTGGTTTTGGAGGGGAG CCTGATAAAGTGCCAGTGCAGCCAATTCCTGTTTCAATGGAGAGTTTACCTGGGACGGAT TGGGCTCTTGTGTCCACAAACGACGGCAAAAAGTATTACTATAACAATAAAACAAAGGTC AGCAGCTGGCAGATTCCTGCAGAAGTAAAAGATTTCGGGAAGAAACTAGAGGAGAGGGCT ATGGAGAGTGTAGCATCAGTGCCTAGTGCTGATTTAACTGAAAAGGGTTCTGATCTAACA AGTTTGAGCGCACCTGCTATTAGCAATGGTGGCCGGGATGCTGCATCTCTAAAAACTACA AATTTTGGTTCGTCCGCGCTGGATTTGGTTAAAAAGAAACTACATGATTCTGGAATGCCT GTCTCATCTACGATAACATCTGAAGCAAATAGTGGTAAAACAACTGAGGTCACACCCAGT GGAGAAAGTGGAAATAGTACGGGTAAGGTGAAAGATGCTCCTGGAGCTGGGGCCCTTTCC GATTCTTCTTCAGATTCGGAAGATGAAGATAGTGGACCATCGAAGGAAGAGTGTTCTAAA CAGTTTAAGGAAATGCTGAAAGAGAGAGGAATAGCACCGTTTTCTAAATGGGAGAAGGAA TTGCCAAAAATTATCTTTGACCCTCGCTTTAAGGCAATACCAAGTCATTCTGTTAGAAGA TCATTATTTGAGCAGTACGTAAAGACACGAGCTGAGGAAGAACGTAGGGAAAAGCGTGCT GCTCATAAGGCAGCTATTGAAGGTTTCAGGCAGTTGCTGGATGATGCGTCTACGGACATT GATCAACACACTGACTATCGTGCTTTTAAAAAGAAATGGGGGAATGATCTCCGGTTCGAA GCAATTGAGCGTAAGGAGCGGGAGGGTTTACTGAATGAAAGAGTCCTTTCTTTGAAACGA AGTGCTGAACAAAAGGCACAAGAAATTCGCGCTGCTGCTGCCTCTGATTTCAAGACAATG CTACGGGAAAGAGAAATATCAATAAATTCACATTGGTCCAAGGTGAAGGATAGTCTGAGA AATGAACCAAGATATAGATCCGTTGCGCACGAGGATAGGGAGGTTTTTTATTATGAGTAC ATTGCGGAACTAAAAGCTGCACAAAGGGGAGATGATCATGAGATGAAAGCCAGAGACGAA GAGGACAAACTGAGGGAACGGGAGCGTGAGTTGCGGAAACGCAAAGAAAGAGAAGTGCAA GAGGTGGAAAGGGTACGACAAAAAATTAGAAGGAAAGAGGCAAGCTCCTCTTATCAAGCT TTGTTAGTGGAAAAAATCAGAGACCCTGAGGCATCATGGACGGAATCTAAGCCAATACTT GAGAGGGATCCTCAAAAACGTGCCTCTAATCCAGACTTAGAACCTGCTGATAAAGAGAAG CTATTCCGAGACCACGTAAAGTCATTATATGAGCGATGTGTTCATGACTTCAAAGCTCTT CTAGCTGAAGCGTTGTCATCTGAAGCAGCTACTCTACAAACAGAAGATGGAAAGACTGCG CTTAATTCTTGGTCAACGGCTAAACAAGTACTGAAACCCGATATCAGGTACAGCAAGATG CCGAGGCAAGATAGGGAAGTCGTATGGCGTCGATATGTTGAGGATATATCGAGGAAACAG AGACATGAAAACTATCAGGAGGAGAAACAACGAGATTACAAGACCTAAAAAAAACCTTGA ACCAATAGGCTCTACCCCATGGCTTGATATGTTGTGAACAAAGATCACCATGTCTTGTTG GTTTTTTCCCTGTTTGTTAACTGTAAACTAAATAGTTTTTTTTCATGTTTCTACTTTAAT TTTTCCGAACAGTATTGTTTCTGTCTAAATGTTTGATTTGGTAAGATCTTAATGTATACA ATTAAATAAGATGTAGGTTTGTTTTTGCTTTGTCCAAAAATTTAAGGTTTGGAGATGGGA ATAAGAAAATGAAGATTAAAAACGTTACTCC