Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G18480.1
CDS Infomation	\| CCAAT-displacement protein alternatively spliced product \| Chr3:6336924-6341596 FORWARD LENGTH=2070 \| 201606
Sequence	ATGGAGGTTTCGCAAGATGGATCGGAAAGAGATAAAACTCCTCCTCCTTCCTCTTCTTCT TCTTCTTCCTCTCCCATTCCTGTCGTCACCAATTTCTGGAAAGAATTTGATTTGGAGAAG GAGAAAAGCCTGCTTGACGAGCAAGGGCTTAGAATAGCTGAAAATCAAGAAAACAGCCAA AAGAATCGCCGAAAGCTTGCAGAGAGCACACGAGACTTCAAGAAAGCTTCGCCTGAGAAC AAACTTAGTATGTTTAATTCCCTCCTCAAGGGATATCAAGAAGAAGTAGATAATATTACC AAGAGGGCCAAGTTTGGGGAGAATGCTTTCCTAAATATCTATCAGAAACTCTATGAAGCA CCTGATCCGTTTCCTGCTCTTGCTTCTATTGCTGAGCAAGATCGTAAATTATCTGAAGTG GAATCTGAAAATCGAAAGATGAAAGTTGAACTTGAGGAGTTTAGGACAGAAGCGACTCAT CTTAAAAATCAGCAGGCCACAATAAGAAGGCTTGAAGAACGGAACCGCCAGCTTGAGCAA CAGATGGAAGAAAAAATCAAAGAAGTTGTTGAGATCAAGCAACGAAATCTGGCTGAGGAA AACCAGAAAACGATGGAGCTTTTAAAGGATAGGGAGCAAGCTTTGCAAGATCAGTTAAGG CAAGCAAAAGACAGCGTCTCCACTATGCAAAAATTGCATGAGTTAGCACAGAACCAACTT TTTGAACTCCGTGCTCAATCAGACGAAGAGACCGCGGGGAAGCAATCTGAAGTTAGTCTA TTGATGGATGAAGTGGAGCGTGCTCAGACCCGACTCCTTACTCTTGAGAGGGAAAAGGGA CATCTGCGTTCTCAGCTGCAAACAGCTAATGAAGATACTGATAACAAGAAAAGTGATAAT ATTGATTCGAATAGTATGCTGGAGAACTCGTTAACTGCAAAAGAGAAGATTATTTCGGAG CTTAATATGGAGATTCACAATGTTGAGACAGCTTTAGCTAATGAGCGAGAAAGTCATGTT GCCGAGATAAAGAAATTGAATTCTTTGCTCAATAAAAAGGATACTATCATTGAAGAGATG AAGAAAGAGCTTCAAGAAAGACCATCAGCAAAATTAGTTGATGATTTGCGCAAAAAAGTG AAAATTCTGCAGGCTGTAGGTTACAATTCAATTGAGGCTGAAGACTGGGATGCTGCTACC ACTGGTGAAGAGATGAGCAAAATGGAGTCGCTTCTTCTTGATAAAAACAGAAAAATGGAA CATGAGGTCACTCAGTTAAAGGTTCAACTTTCTGAGAAAGCTTCCTTGCTTGAGAAGGCT GAAGCCAAGGGAGAAGAACTGACAGCTAAGGTTAATGAACAACAAAGACTGATACAAAAG TTGGAGGATGATATTTTGAAGGGTTACGGTTCAAAAGAGCGAAAAGGTGCTCTATTTGAT GAATGGGAGTTCTCAGAAGCAGGTGTGGCTGAGCAGTCTGAGCCTATGGATCAGAAACAT GTTCCATCAGAGCAAGATCAAAGCTCAATGCTAAAAGTTATCTGCAGCCAAAGAGATCGG TTCCGAGCACGATTACGGGAAACAGAAGAGGAAATAAGGCGATTAAAAGAGAAGATAGGT TTTCTCACAGACGAATTGGAGAAGACCAAAGCAGACAACGTCAAACTCTATGGGAAAATC CGTTATGTCCAAGACTATAACCATGATAAAGTTGTTTCCCGAGGATCGAAAAAGTATGTG GAAGATCTTGAAAGTGGATTCAGCTCGGATGTCGAATCAAAATACAAGAAAATTTACGAA GATGACATCAACCCTTTTGCAGCATTCTCGAAAAAGGAAAGAGAGCAACGGATCAAAGAT TTGGGAATCAGAGATCGGATTACGCTAAGCAGTGGGCGGTTCCTTCTAGGAAACAAATAC GCAAGGACATTTGCTTTCTTCTACACAATAGGATTGCACGTCCTTGTCTTCACTTGTCTC TACCGTATGTCTGCTTACAGTTATCTCAGCCATGGAGCAGAGGAGACTCTAATGACAGAA GCAACCACAAACCTTCCTCACGGTCTTTAA

Peptide Sequence

PEP ID	AT3G18480.1
PEP Infomation	\| CCAAT-displacement protein alternatively spliced product \| Chr3:6336924-6341596 FORWARD LENGTH=689 \| 201606
Sequence	MEVSQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQ QMEEKIKEVVEIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQL FELRAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDN IDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLNKKDTIIEEM KKELQERPSAKLVDDLRKKVKILQAVGYNSIEAEDWDAATTGEEMSKMESLLLDKNRKME HEVTQLKVQLSEKASLLEKAEAKGEELTAKVNEQQRLIQKLEDDILKGYGSKERKGALFD EWEFSEAGVAEQSEPMDQKHVPSEQDQSSMLKVICSQRDRFRARLRETEEEIRRLKEKIG FLTDELEKTKADNVKLYGKIRYVQDYNHDKVVSRGSKKYVEDLESGFSSDVESKYKKIYE DDINPFAAFSKKEREQRIKDLGIRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCL YRMSAYSYLSHGAEETLMTEATTNLPHGL

Transcript Sequence

Transcript ID	AT3G18480.1
Transcript Infomation	\| CCAAT-displacement protein alternatively spliced product \| Chr3:6336692-6341788 FORWARD LENGTH=2494 \| 201606
Sequence	CTCATAACAAAAAAATAAATAAGAATTACGCTTCTACCACCATTAAACTCTAATGTATCT GAACTCAGAAGATCCGATCGGAGTAGTAAAAATTCAACAAAACAACAATAAGAAAACTCA TTAATTCATTCGTCGGATTCGAAGAAGAAATCACTTCCCAGAAACTTTCTTCGTATCGAA GTATTGCTTGTGTTCTTCGGAGAAACGAGATCGGGATCCGAATACGAGTACAATGGAGGT TTCGCAAGATGGATCGGAAAGAGATAAAACTCCTCCTCCTTCCTCTTCTTCTTCTTCTTC CTCTCCCATTCCTGTCGTCACCAATTTCTGGAAAGAATTTGATTTGGAGAAGGAGAAAAG CCTGCTTGACGAGCAAGGGCTTAGAATAGCTGAAAATCAAGAAAACAGCCAAAAGAATCG CCGAAAGCTTGCAGAGAGCACACGAGACTTCAAGAAAGCTTCGCCTGAGAACAAACTTAG TATGTTTAATTCCCTCCTCAAGGGATATCAAGAAGAAGTAGATAATATTACCAAGAGGGC CAAGTTTGGGGAGAATGCTTTCCTAAATATCTATCAGAAACTCTATGAAGCACCTGATCC GTTTCCTGCTCTTGCTTCTATTGCTGAGCAAGATCGTAAATTATCTGAAGTGGAATCTGA AAATCGAAAGATGAAAGTTGAACTTGAGGAGTTTAGGACAGAAGCGACTCATCTTAAAAA TCAGCAGGCCACAATAAGAAGGCTTGAAGAACGGAACCGCCAGCTTGAGCAACAGATGGA AGAAAAAATCAAAGAAGTTGTTGAGATCAAGCAACGAAATCTGGCTGAGGAAAACCAGAA AACGATGGAGCTTTTAAAGGATAGGGAGCAAGCTTTGCAAGATCAGTTAAGGCAAGCAAA AGACAGCGTCTCCACTATGCAAAAATTGCATGAGTTAGCACAGAACCAACTTTTTGAACT CCGTGCTCAATCAGACGAAGAGACCGCGGGGAAGCAATCTGAAGTTAGTCTATTGATGGA TGAAGTGGAGCGTGCTCAGACCCGACTCCTTACTCTTGAGAGGGAAAAGGGACATCTGCG TTCTCAGCTGCAAACAGCTAATGAAGATACTGATAACAAGAAAAGTGATAATATTGATTC GAATAGTATGCTGGAGAACTCGTTAACTGCAAAAGAGAAGATTATTTCGGAGCTTAATAT GGAGATTCACAATGTTGAGACAGCTTTAGCTAATGAGCGAGAAAGTCATGTTGCCGAGAT AAAGAAATTGAATTCTTTGCTCAATAAAAAGGATACTATCATTGAAGAGATGAAGAAAGA GCTTCAAGAAAGACCATCAGCAAAATTAGTTGATGATTTGCGCAAAAAAGTGAAAATTCT GCAGGCTGTAGGTTACAATTCAATTGAGGCTGAAGACTGGGATGCTGCTACCACTGGTGA AGAGATGAGCAAAATGGAGTCGCTTCTTCTTGATAAAAACAGAAAAATGGAACATGAGGT CACTCAGTTAAAGGTTCAACTTTCTGAGAAAGCTTCCTTGCTTGAGAAGGCTGAAGCCAA GGGAGAAGAACTGACAGCTAAGGTTAATGAACAACAAAGACTGATACAAAAGTTGGAGGA TGATATTTTGAAGGGTTACGGTTCAAAAGAGCGAAAAGGTGCTCTATTTGATGAATGGGA GTTCTCAGAAGCAGGTGTGGCTGAGCAGTCTGAGCCTATGGATCAGAAACATGTTCCATC AGAGCAAGATCAAAGCTCAATGCTAAAAGTTATCTGCAGCCAAAGAGATCGGTTCCGAGC ACGATTACGGGAAACAGAAGAGGAAATAAGGCGATTAAAAGAGAAGATAGGTTTTCTCAC AGACGAATTGGAGAAGACCAAAGCAGACAACGTCAAACTCTATGGGAAAATCCGTTATGT CCAAGACTATAACCATGATAAAGTTGTTTCCCGAGGATCGAAAAAGTATGTGGAAGATCT TGAAAGTGGATTCAGCTCGGATGTCGAATCAAAATACAAGAAAATTTACGAAGATGACAT CAACCCTTTTGCAGCATTCTCGAAAAAGGAAAGAGAGCAACGGATCAAAGATTTGGGAAT CAGAGATCGGATTACGCTAAGCAGTGGGCGGTTCCTTCTAGGAAACAAATACGCAAGGAC ATTTGCTTTCTTCTACACAATAGGATTGCACGTCCTTGTCTTCACTTGTCTCTACCGTAT GTCTGCTTACAGTTATCTCAGCCATGGAGCAGAGGAGACTCTAATGACAGAAGCAACCAC AAACCTTCCTCACGGTCTTTAAGCTCTCACCCTAGGGACTTATTCGTTTTTGGTCGTTAT GTTCTTTCTTGTCCTTGTAGTGTTCCGTGGGCAATTCTAAAACGGTTGAATATTTGTACA GAGGGATCCAAATCACTCGATACATATATAAAGCCACAGAAAAAACTTCCTTCAGAAAAC TGCAGAAATCTAAATAAGATCTGGTTTACTTTTC