Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G18110.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:6204940-6209691 REVERSE LENGTH=4323 \| 201606
Sequence	ATGGCGGTTTCTGCAGGGGCTTTAGCTTTTCCTGCTTTATCCGTTCGCGCCACTCTTAAT CCTGAGATTAAAGATGAACAAGCGAACATCAGCAGCACTACTTCTTCTTCCCAGAAATTC ACTTACAGTCGAGCTTCTCCCGCCGTCCGATGGCCACATTTGAATCTCCGTGAGATTTAT GATTCCACACCTTCACAAACTCTTTCTTCTCCGGTTTCTCCCATCGCCGGTACACCGGAT TCAGGTGATGTCGTCGATTCAATTGCCTCCCGCGAGGAGCAAAAGACGAAAGATGAAACC GCCGTGGCGACTCGGAGAAGGAGAGTGAAGAAGATGAATAAAGTGGCGTTGATTAAGGCT AAAGACTGGAGAGAGAGAGTCAAATTTCTGACGGATAAGATTCTAAGCTTGAAATCTAAT CAGTTCGTTGCTGATATTCTCGATGCTCGTCTTGTTCAGATGACTCCTACTGATTACTGC TTCGTCGTGAAATCAGTTGGTCAAGAGAGTTGGCAACGAGCTCTTGAGGTTTTTGAGTGG CTCAATCTCCGTCATTGGCACTCTCCTAACGCTCGGATGGTGGCTGCTATACTCGGTGTT TTGGGACGGTGGAATCAGGAATCCCTTGCGGTGGAGATTTTCACTAGGGCTGAGCCAACC GTCGGAGATAGGGTTCAGGTGTACAACGCAATGATGGGGGTTTATTCACGTAGTGGTAAG TTTTCGAAAGCACAAGAGCTGGTCGATGCAATGCGTCAGAGAGGGTGTGTTCCAGATCTT ATTAGTTTCAATACTCTTATCAACGCTAGGCTTAAATCTGGTGGGTTGACTCCGAATTTG GCTGTTGAGTTATTAGATATGGTGAGGAATTCGGGTCTTAGGCCTGATGCTATCACTTAC AACACTCTTCTTAGTGCCTGTTCGCGGGATTCGAATTTGGATGGTGCAGTGAAGGTTTTT GAGGATATGGAAGCTCATCGGTGTCAGCCTGATTTGTGGACTTATAATGCTATGATTTCT GTTTATGGAAGATGTGGGCTTGCTGCTGAAGCTGAGAGGCTCTTCATGGAGCTGGAGCTT AAAGGTTTTTTCCCTGATGCAGTGACATACAACTCTTTGCTGTATGCGTTTGCCAGAGAA AGAAATACGGAGAAGGTGAAGGAGGTGTACCAACAGATGCAGAAAATGGGGTTTGGGAAA GATGAGATGACATACAACACGATCATTCACATGTATGGCAAGCAGGGACAACTTGATCTT GCGCTACAGCTTTATAAGGACATGAAAGGTTTGTCGGGTAGGAACCCTGATGCTATTACT TACACTGTTTTGATCGATTCTCTTGGAAAAGCAAACCGAACAGTGGAAGCCGCAGCTTTA ATGTCTGAGATGCTTGATGTTGGGATCAAACCAACTCTGCAGACATACAGTGCTCTTATC TGTGGTTATGCCAAGGCTGGAAAGCGAGAGGAGGCTGAGGATACTTTCAGTTGCATGTTG CGCTCAGGCACTAAACCTGATAATTTAGCGTATTCTGTAATGTTGGATGTATTACTAAGA GGCAACGAGACAAGAAAGGCCTGGGGTTTATACCGTGATATGATTTCTGATGGTCATACA CCGTCTTACACTCTGTATGAGTTGATGATACTTGGACTTATGAAGGAAAACAGGTCAGAT GACATTCAGAAAACCATCAGAGACATGGAAGAATTGTGTGGCATGAACCCACTAGAGATT TCATCAGTGCTTGTTAAGGGCGAATGCTTTGATCTCGCTGCTAGACAGTTGAAAGTGGCT ATCACCAATGGCTATGAATTGGAAAACGACACTCTATTGTCTATCCTGGGTTCCTATAGT TCATCAGGCAGGCATTCAGAAGCGTTTGAGTTACTTGAATTTTTGAAAGAGCATGCCAGT GGATCTAAAAGACTTATAACTGAAGCTCTAATTGTTCTACATTGCAAGGTGAACAACTTA AGCGCTGCTCTAGATGAATATTTCGCTGACCCATGTGTTCATGGCTGGTGTTTTGGCAGT TCCACCATGTATGAGACTCTATTACACTGCTGTGTAGCAAATGAACATTATGCTGAAGCT TCTCAGGTTTTCTCTGACCTGAGACTATCTGGCTGCGAAGCTTCAGAAAGTGTTTGTAAA AGCATGGTTGTTGTGTATTGCAAGCTTGGCTTTCCAGAGACAGCTCATCAAGTGGTTAAT CAGGCTGAGACAAAAGGCTTCCACTTTGCTTGTTCGCCTATGTATACTGATATCATTGAG GCTTATGGAAAACAAAAACTATGGCAGAAAGCGGAGAGTGTGGTTGGCAACCTAAGACAA AGTGGACGAACACCTGATCTGAAGACATGGAACAGCTTGATGTCGGCTTATGCTCAGTGT GGCTGTTACGAGCGGGCAAGGGCTATTTTTAACACTATGATGAGGGATGGTCCGTCTCCT ACTGTTGAATCCATCAATATTTTGTTGCATGCTTTGTGTGTTGATGGGAGACTCGAGGAG CTCTACGTTGTTGTTGAAGAATTGCAAGATATGGGCTTTAAGATTAGCAAAAGCTCCATT CTCTTGATGCTTGACGCATTTGCCCGAGCTGGAAATATCTTTGAGGTAAAGAAGATATAC AGTAGCATGAAAGCTGCTGGTTACTTACCCACAATCCGCCTTTATAGGATGATGATTGAG CTTCTCTGCAAAGGGAAACGAGTTAGAGATGCTGAAATTATGGTCTCTGAAATGGAAGAG GCCAATTTCAAGGTTGAGCTTGCTATATGGAATTCCATGCTGAAGATGTATACGGCTATC GAGGATTACAAGAAGACAGTTCAAGTATACCAGAGGATAAAAGAAACTGGACTGGAACCA GACGAGACCACTTACAATACTCTGATTATAATGTATTGTAGAGACAGACGACCAGAAGAA GGGTACTTGCTTATGCAGCAAATGAGAAATCTTGGTTTGGACCCAAAACTGGACACATAC AAGAGCTTGATCTCTGCTTTTGGTAAGCAAAAATGCCTTGAACAAGCTGAACAACTGTTT GAAGAGCTTCTCTCAAAAGGTTTGAAACTAGACCGTTCATTTTACCACACAATGATGAAA ATATCCCGAGATTCTGGAAGCGACTCCAAGGCAGAGAAGTTATTGCAAATGATGAAGAAT GCGGGAATAGAACCAACACTTGCTACAATGCATCTGCTTATGGTTTCATATAGTTCTTCA GGAAATCCCCAAGAAGCTGAAAAAGTTCTTAGTAACCTGAAAGACACAGAAGTGGAACTA ACAACTCTGCCTTATAGTTCAGTTATTGATGCTTACCTTCGGAGCAAAGATTATAACAGT GGAATAGAAAGGCTTTTGGAAATGAAGAAAGAGGGCCTAGAGCCAGACCACAGGATATGG ACTTGCTTTGTTAGGGCGGCGAGTTTCTCCAAGGAAAAAATTGAAGTCATGTTGCTGCTT AAAGCTCTTGAAGATATTGGTTTTGATCTTCCTATCAGGCTTTTAGCTGGAAGACCTGAG TTGCTAGTTTCTGAGGTGGATGGATGGTTCGAGAAACTGAAATCCATAGAGGACAATGCT GCTCTCAATTTTGTTAATGCTCTTTTGAATCTTCTCTGGGCGTTTGAACTCAGAGCTACT GCATCATGGGTTTTCCAATTGGGAATCAAAAGGGGTATCTTCAGTCTCGATGTTTTTAGG GTGGCGGACAAGGACTGGGGTGCGGATTTCAGAAGGCTGTCTGGAGGTGCAGCACTTGTT GCCCTGACGCTATGGCTTGACCACATGCAGGATGCATCACTGGAAGGCTACCCAGAGTCT CCAAAGTCAGTTGTCTTAATCACAGGGACCGCAGAGTACAACGGTATATCCCTTGATAAA ACGCTAAAGGCGTGTCTTTGGGAAATGGGTTCTCCATTTCTTCCCTGCAAGACGAGAACG GGACTGCTAGTGGCCAAAGCTCACTCTCTCAGAATGTGGTTGAAGGACTCGCCGTTCTGC TTCGACTTGGAGCTAAAAGACTCGGTGTCTTTACCAGAATCAAACTCGATGGACCTGATT GACGGGTGTTTCATAAGACGTGGACTTGTTCCTGCGTTTAACCACATCAAAGAGAGACTT GGTGGATTTGTGTCACCAAAGAAGTTTTCGAGACTGGCGTTGCTACCAGACGAGATGAGA GAGCGAGTGATAAAGACAGATATTGAAGGACATAGACAGAAGTTAGAGAAGATGAAGAAG AAGAAAATGGGCAATGAAACGAATGGTATTAACACTCGAAGGAAGTTCGTCAGAAGCAAG TGA

Peptide Sequence

PEP ID	AT3G18110.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:6204940-6209691 REVERSE LENGTH=1440 \| 201606
Sequence	MAVSAGALAFPALSVRATLNPEIKDEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIY DSTPSQTLSSPVSPIAGTPDSGDVVDSIASREEQKTKDETAVATRRRRVKKMNKVALIKA KDWRERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEW LNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGK FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW TCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNA ALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALV ALTLWLDHMQDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRT GLLVAKAHSLRMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERL GGFVSPKKFSRLALLPDEMRERVIKTDIEGHRQKLEKMKKKKMGNETNGINTRRKFVRSK

Transcript Sequence

Transcript ID	AT3G18110.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:6204429-6209801 REVERSE LENGTH=4944 \| 201606
Sequence	GTTTGTTTCTCACTTTCTCAGGAACCTTAAAAGATCACTCTTCTCTTTCACTCGCTTCTC ATCTTTTAACGGTACAACGAAATTTATGAAGCTGAGAGAAGAAGACATTAATGGCGGTTT CTGCAGGGGCTTTAGCTTTTCCTGCTTTATCCGTTCGCGCCACTCTTAATCCTGAGATTA AAGATGAACAAGCGAACATCAGCAGCACTACTTCTTCTTCCCAGAAATTCACTTACAGTC GAGCTTCTCCCGCCGTCCGATGGCCACATTTGAATCTCCGTGAGATTTATGATTCCACAC CTTCACAAACTCTTTCTTCTCCGGTTTCTCCCATCGCCGGTACACCGGATTCAGGTGATG TCGTCGATTCAATTGCCTCCCGCGAGGAGCAAAAGACGAAAGATGAAACCGCCGTGGCGA CTCGGAGAAGGAGAGTGAAGAAGATGAATAAAGTGGCGTTGATTAAGGCTAAAGACTGGA GAGAGAGAGTCAAATTTCTGACGGATAAGATTCTAAGCTTGAAATCTAATCAGTTCGTTG CTGATATTCTCGATGCTCGTCTTGTTCAGATGACTCCTACTGATTACTGCTTCGTCGTGA AATCAGTTGGTCAAGAGAGTTGGCAACGAGCTCTTGAGGTTTTTGAGTGGCTCAATCTCC GTCATTGGCACTCTCCTAACGCTCGGATGGTGGCTGCTATACTCGGTGTTTTGGGACGGT GGAATCAGGAATCCCTTGCGGTGGAGATTTTCACTAGGGCTGAGCCAACCGTCGGAGATA GGGTTCAGGTGTACAACGCAATGATGGGGGTTTATTCACGTAGTGGTAAGTTTTCGAAAG CACAAGAGCTGGTCGATGCAATGCGTCAGAGAGGGTGTGTTCCAGATCTTATTAGTTTCA ATACTCTTATCAACGCTAGGCTTAAATCTGGTGGGTTGACTCCGAATTTGGCTGTTGAGT TATTAGATATGGTGAGGAATTCGGGTCTTAGGCCTGATGCTATCACTTACAACACTCTTC TTAGTGCCTGTTCGCGGGATTCGAATTTGGATGGTGCAGTGAAGGTTTTTGAGGATATGG AAGCTCATCGGTGTCAGCCTGATTTGTGGACTTATAATGCTATGATTTCTGTTTATGGAA GATGTGGGCTTGCTGCTGAAGCTGAGAGGCTCTTCATGGAGCTGGAGCTTAAAGGTTTTT TCCCTGATGCAGTGACATACAACTCTTTGCTGTATGCGTTTGCCAGAGAAAGAAATACGG AGAAGGTGAAGGAGGTGTACCAACAGATGCAGAAAATGGGGTTTGGGAAAGATGAGATGA CATACAACACGATCATTCACATGTATGGCAAGCAGGGACAACTTGATCTTGCGCTACAGC TTTATAAGGACATGAAAGGTTTGTCGGGTAGGAACCCTGATGCTATTACTTACACTGTTT TGATCGATTCTCTTGGAAAAGCAAACCGAACAGTGGAAGCCGCAGCTTTAATGTCTGAGA TGCTTGATGTTGGGATCAAACCAACTCTGCAGACATACAGTGCTCTTATCTGTGGTTATG CCAAGGCTGGAAAGCGAGAGGAGGCTGAGGATACTTTCAGTTGCATGTTGCGCTCAGGCA CTAAACCTGATAATTTAGCGTATTCTGTAATGTTGGATGTATTACTAAGAGGCAACGAGA CAAGAAAGGCCTGGGGTTTATACCGTGATATGATTTCTGATGGTCATACACCGTCTTACA CTCTGTATGAGTTGATGATACTTGGACTTATGAAGGAAAACAGGTCAGATGACATTCAGA AAACCATCAGAGACATGGAAGAATTGTGTGGCATGAACCCACTAGAGATTTCATCAGTGC TTGTTAAGGGCGAATGCTTTGATCTCGCTGCTAGACAGTTGAAAGTGGCTATCACCAATG GCTATGAATTGGAAAACGACACTCTATTGTCTATCCTGGGTTCCTATAGTTCATCAGGCA GGCATTCAGAAGCGTTTGAGTTACTTGAATTTTTGAAAGAGCATGCCAGTGGATCTAAAA GACTTATAACTGAAGCTCTAATTGTTCTACATTGCAAGGTGAACAACTTAAGCGCTGCTC TAGATGAATATTTCGCTGACCCATGTGTTCATGGCTGGTGTTTTGGCAGTTCCACCATGT ATGAGACTCTATTACACTGCTGTGTAGCAAATGAACATTATGCTGAAGCTTCTCAGGTTT TCTCTGACCTGAGACTATCTGGCTGCGAAGCTTCAGAAAGTGTTTGTAAAAGCATGGTTG TTGTGTATTGCAAGCTTGGCTTTCCAGAGACAGCTCATCAAGTGGTTAATCAGGCTGAGA CAAAAGGCTTCCACTTTGCTTGTTCGCCTATGTATACTGATATCATTGAGGCTTATGGAA AACAAAAACTATGGCAGAAAGCGGAGAGTGTGGTTGGCAACCTAAGACAAAGTGGACGAA CACCTGATCTGAAGACATGGAACAGCTTGATGTCGGCTTATGCTCAGTGTGGCTGTTACG AGCGGGCAAGGGCTATTTTTAACACTATGATGAGGGATGGTCCGTCTCCTACTGTTGAAT CCATCAATATTTTGTTGCATGCTTTGTGTGTTGATGGGAGACTCGAGGAGCTCTACGTTG TTGTTGAAGAATTGCAAGATATGGGCTTTAAGATTAGCAAAAGCTCCATTCTCTTGATGC TTGACGCATTTGCCCGAGCTGGAAATATCTTTGAGGTAAAGAAGATATACAGTAGCATGA AAGCTGCTGGTTACTTACCCACAATCCGCCTTTATAGGATGATGATTGAGCTTCTCTGCA AAGGGAAACGAGTTAGAGATGCTGAAATTATGGTCTCTGAAATGGAAGAGGCCAATTTCA AGGTTGAGCTTGCTATATGGAATTCCATGCTGAAGATGTATACGGCTATCGAGGATTACA AGAAGACAGTTCAAGTATACCAGAGGATAAAAGAAACTGGACTGGAACCAGACGAGACCA CTTACAATACTCTGATTATAATGTATTGTAGAGACAGACGACCAGAAGAAGGGTACTTGC TTATGCAGCAAATGAGAAATCTTGGTTTGGACCCAAAACTGGACACATACAAGAGCTTGA TCTCTGCTTTTGGTAAGCAAAAATGCCTTGAACAAGCTGAACAACTGTTTGAAGAGCTTC TCTCAAAAGGTTTGAAACTAGACCGTTCATTTTACCACACAATGATGAAAATATCCCGAG ATTCTGGAAGCGACTCCAAGGCAGAGAAGTTATTGCAAATGATGAAGAATGCGGGAATAG AACCAACACTTGCTACAATGCATCTGCTTATGGTTTCATATAGTTCTTCAGGAAATCCCC AAGAAGCTGAAAAAGTTCTTAGTAACCTGAAAGACACAGAAGTGGAACTAACAACTCTGC CTTATAGTTCAGTTATTGATGCTTACCTTCGGAGCAAAGATTATAACAGTGGAATAGAAA GGCTTTTGGAAATGAAGAAAGAGGGCCTAGAGCCAGACCACAGGATATGGACTTGCTTTG TTAGGGCGGCGAGTTTCTCCAAGGAAAAAATTGAAGTCATGTTGCTGCTTAAAGCTCTTG AAGATATTGGTTTTGATCTTCCTATCAGGCTTTTAGCTGGAAGACCTGAGTTGCTAGTTT CTGAGGTGGATGGATGGTTCGAGAAACTGAAATCCATAGAGGACAATGCTGCTCTCAATT TTGTTAATGCTCTTTTGAATCTTCTCTGGGCGTTTGAACTCAGAGCTACTGCATCATGGG TTTTCCAATTGGGAATCAAAAGGGGTATCTTCAGTCTCGATGTTTTTAGGGTGGCGGACA AGGACTGGGGTGCGGATTTCAGAAGGCTGTCTGGAGGTGCAGCACTTGTTGCCCTGACGC TATGGCTTGACCACATGCAGGATGCATCACTGGAAGGCTACCCAGAGTCTCCAAAGTCAG TTGTCTTAATCACAGGGACCGCAGAGTACAACGGTATATCCCTTGATAAAACGCTAAAGG CGTGTCTTTGGGAAATGGGTTCTCCATTTCTTCCCTGCAAGACGAGAACGGGACTGCTAG TGGCCAAAGCTCACTCTCTCAGAATGTGGTTGAAGGACTCGCCGTTCTGCTTCGACTTGG AGCTAAAAGACTCGGTGTCTTTACCAGAATCAAACTCGATGGACCTGATTGACGGGTGTT TCATAAGACGTGGACTTGTTCCTGCGTTTAACCACATCAAAGAGAGACTTGGTGGATTTG TGTCACCAAAGAAGTTTTCGAGACTGGCGTTGCTACCAGACGAGATGAGAGAGCGAGTGA TAAAGACAGATATTGAAGGACATAGACAGAAGTTAGAGAAGATGAAGAAGAAGAAAATGG GCAATGAAACGAATGGTATTAACACTCGAAGGAAGTTCGTCAGAAGCAAGTGATGTCATG ATATTGTACTCTCTTATTATAAAATCTCATTAGTGATTATTTGTATACAGACAGTTTTGA TTTTCCTCTTTGTGGATACTAATTAGAATAAGTGTTCATGTAATATTTATCGATAGGGTT TAGTAAATTAAACAGAGCTATTGCGTCTAACAACCTTTTACCGTGAACGAAAAAAAATGT AATGCATTCAACTACTCTTTCTACCAATGCCTAGTTCAACTTATTTATTGTTGAGTTCAA GATTTTTGTTGTCGTTGTTGTTAGAATCAGTGACTATTCTAAAGATGTTTGGATTACACA TATTTATACATACAATAAATTTCAAAATTTTCAAGAGCCAAAAAAACAACTAATTTGGTG CATCTTGGTTCTTAATAGGAACAACTGCAGATATTTTCCTTCTCCTAGGCGTAAGTTTTT TTAAACCAGTGGTGTTGTTAGATGTTTCTGCAACACTTTTGCGTCTTCGTTTTCGTTTCT CCTTTGCATTGTCTTGGATCTCGT