Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G16890.1
CDS Infomation	\| pentatricopeptide (PPR) domain protein 40 \| Chr3:5768401-5770380 REVERSE LENGTH=1980 \| 201606
Sequence	ATGAGAGGCTTTGCTTCTTCAGCATCTAGAATAGCGACGGCGGCAGCAGCTTCCAAATCA CTAAACGCTTCCACATCCGTAAACCCTAAGCTCTCAAAAACCCTAAACTCTTCAGGTAAA CCCACCAATCCTCTGAACCAGCGTTACATTTCGCAAGTCATAGAGAGAAAAGATTGGTTT TTGATACTGAATCAAGAATTCACCACTCATCGAATTGGTCTCAACACTCGATTCGTCATC AGCGTTTTGCAGAATCAAGACAACCCATTACACTCCCTGCGATTTTACCTCTGGGTCTCC AACTTCGACCCGGTTTACGCTAAGGATCAGTCTCTGAAGAGTGTTCTAGGGAACGCACTT TTTCGTAAAGGCCCCTTATTGTTGTCTATGGAATTGCTTAAAGAGATTAGAGATTCAGGG TATCGGATTAGTGATGAATTGATGTGTGTTTTGATCGGAAGCTGGGGAAGATTAGGTTTA GCTAAGTACTGTAATGATGTTTTTGCTCAGATATCTTTTCTTGGAATGAAACCAAGTACA AGGCTTTATAATGCTGTGATTGATGCGTTGGTGAAGTCTAATTCACTTGATTTGGCTTAC CTCAAGTTTCAGCAGATGCGTAGTGATGGCTGTAAACCGGATCGGTTTACCTATAATATA CTTATACATGGTGTTTGCAAGAAGGGTGTGGTTGATGAAGCTATTCGATTGGTTAAACAG ATGGAACAGGAAGGGAATAGACCCAATGTGTTCACATACACGATTTTGATCGACGGGTTT TTGATAGCAGGGAGGGTTGATGAGGCGTTGAAGCAATTGGAGATGATGCGGGTGAGAAAG TTGAATCCTAATGAAGCTACAATCAGAACTTTCGTACACGGGATTTTCCGTTGCTTGCCG CCGTGTAAAGCGTTTGAGGTTTTGGTTGGGTTTATGGAGAAAGACTCAAACTTGCAAAGA GTTGGTTACGATGCTGTGTTGTATTGTCTTTCAAACAACTCAATGGCTAAAGAGACTGGT CAATTCTTGAGGAAGATAGGTGAGAGAGGTTATATTCCGGATAGCTCAACATTCAATGCT GCGATGAGTTGTCTCCTAAAAGGGCATGATCTTGTTGAGACTTGTAGGATATTTGACGGT TTTGTCAGCCGTGGAGTTAAGCCAGGATTCAATGGTTATCTTGTGTTAGTTCAAGCTCTG TTGAATGCTCAGAGGTTCTCTGAAGGTGACCGGTATCTGAAACAAATGGGTGTTGACGGG CTTCTATCAAGTGTATATAGTTATAATGCGGTAATTGACTGTCTCTGCAAGGCTCGACGC ATAGAGAATGCAGCTATGTTCTTAACAGAGATGCAGGATAGAGGTATTTCTCCGAATCTC GTAACTTTCAATACCTTTCTGAGCGGTTATAGCGTGAGGGGTGATGTAAAGAAGGTTCAC GGCGTGCTAGAGAAGCTTCTTGTACATGGTTTCAAACCAGACGTGATCACTTTCAGTTTG ATCATAAACTGTCTTTGCAGAGCAAAAGAAATTAAAGATGCATTTGACTGTTTCAAGGAG ATGTTGGAATGGGGTATTGAGCCAAACGAGATCACATACAATATCTTGATTCGCTCCTGT TGTTCCACCGGAGATACCGATAGATCAGTGAAGCTGTTTGCGAAGATGAAGGAAAACGGG TTAAGTCCAGACCTTTATGCGTACAATGCGACTATTCAGAGTTTTTGCAAGATGAGAAAG GTTAAGAAGGCTGAGGAATTGCTTAAAACAATGCTGAGAATTGGTTTGAAACCAGATAAC TTTACATATAGCACTCTCATCAAAGCTCTAAGTGAATCTGGAAGAGAGAGTGAAGCAAGA GAGATGTTCAGTTCAATCGAAAGACATGGATGTGTTCCAGATTCATATACTAAGCGTCTT GTTGAAGAACTTGACCTAAGAAAAAGTGGACTCTCGAGAGAAACCGTGTCAGCCTCATAG

Peptide Sequence

PEP ID	AT3G16890.1
PEP Infomation	\| pentatricopeptide (PPR) domain protein 40 \| Chr3:5768401-5770380 REVERSE LENGTH=659 \| 201606
Sequence	MRGFASSASRIATAAAASKSLNASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWF LILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNAL FRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPST RLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ MEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLP PCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA AMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDG LLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN FTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSRETVSAS

Transcript Sequence

Transcript ID	AT3G16890.1
Transcript Infomation	\| pentatricopeptide (PPR) domain protein 40 \| Chr3:5767977-5770436 REVERSE LENGTH=2460 \| 201606
Sequence	GAGGTTAGAGACCAAATCAATGTTTCACTTGCACTCAGCTCCGTTCTGGTCACGACATGA GAGGCTTTGCTTCTTCAGCATCTAGAATAGCGACGGCGGCAGCAGCTTCCAAATCACTAA ACGCTTCCACATCCGTAAACCCTAAGCTCTCAAAAACCCTAAACTCTTCAGGTAAACCCA CCAATCCTCTGAACCAGCGTTACATTTCGCAAGTCATAGAGAGAAAAGATTGGTTTTTGA TACTGAATCAAGAATTCACCACTCATCGAATTGGTCTCAACACTCGATTCGTCATCAGCG TTTTGCAGAATCAAGACAACCCATTACACTCCCTGCGATTTTACCTCTGGGTCTCCAACT TCGACCCGGTTTACGCTAAGGATCAGTCTCTGAAGAGTGTTCTAGGGAACGCACTTTTTC GTAAAGGCCCCTTATTGTTGTCTATGGAATTGCTTAAAGAGATTAGAGATTCAGGGTATC GGATTAGTGATGAATTGATGTGTGTTTTGATCGGAAGCTGGGGAAGATTAGGTTTAGCTA AGTACTGTAATGATGTTTTTGCTCAGATATCTTTTCTTGGAATGAAACCAAGTACAAGGC TTTATAATGCTGTGATTGATGCGTTGGTGAAGTCTAATTCACTTGATTTGGCTTACCTCA AGTTTCAGCAGATGCGTAGTGATGGCTGTAAACCGGATCGGTTTACCTATAATATACTTA TACATGGTGTTTGCAAGAAGGGTGTGGTTGATGAAGCTATTCGATTGGTTAAACAGATGG AACAGGAAGGGAATAGACCCAATGTGTTCACATACACGATTTTGATCGACGGGTTTTTGA TAGCAGGGAGGGTTGATGAGGCGTTGAAGCAATTGGAGATGATGCGGGTGAGAAAGTTGA ATCCTAATGAAGCTACAATCAGAACTTTCGTACACGGGATTTTCCGTTGCTTGCCGCCGT GTAAAGCGTTTGAGGTTTTGGTTGGGTTTATGGAGAAAGACTCAAACTTGCAAAGAGTTG GTTACGATGCTGTGTTGTATTGTCTTTCAAACAACTCAATGGCTAAAGAGACTGGTCAAT TCTTGAGGAAGATAGGTGAGAGAGGTTATATTCCGGATAGCTCAACATTCAATGCTGCGA TGAGTTGTCTCCTAAAAGGGCATGATCTTGTTGAGACTTGTAGGATATTTGACGGTTTTG TCAGCCGTGGAGTTAAGCCAGGATTCAATGGTTATCTTGTGTTAGTTCAAGCTCTGTTGA ATGCTCAGAGGTTCTCTGAAGGTGACCGGTATCTGAAACAAATGGGTGTTGACGGGCTTC TATCAAGTGTATATAGTTATAATGCGGTAATTGACTGTCTCTGCAAGGCTCGACGCATAG AGAATGCAGCTATGTTCTTAACAGAGATGCAGGATAGAGGTATTTCTCCGAATCTCGTAA CTTTCAATACCTTTCTGAGCGGTTATAGCGTGAGGGGTGATGTAAAGAAGGTTCACGGCG TGCTAGAGAAGCTTCTTGTACATGGTTTCAAACCAGACGTGATCACTTTCAGTTTGATCA TAAACTGTCTTTGCAGAGCAAAAGAAATTAAAGATGCATTTGACTGTTTCAAGGAGATGT TGGAATGGGGTATTGAGCCAAACGAGATCACATACAATATCTTGATTCGCTCCTGTTGTT CCACCGGAGATACCGATAGATCAGTGAAGCTGTTTGCGAAGATGAAGGAAAACGGGTTAA GTCCAGACCTTTATGCGTACAATGCGACTATTCAGAGTTTTTGCAAGATGAGAAAGGTTA AGAAGGCTGAGGAATTGCTTAAAACAATGCTGAGAATTGGTTTGAAACCAGATAACTTTA CATATAGCACTCTCATCAAAGCTCTAAGTGAATCTGGAAGAGAGAGTGAAGCAAGAGAGA TGTTCAGTTCAATCGAAAGACATGGATGTGTTCCAGATTCATATACTAAGCGTCTTGTTG AAGAACTTGACCTAAGAAAAAGTGGACTCTCGAGAGAAACCGTGTCAGCCTCATAGAAAT TGAATCCTCGAGAGTGTGAATATCCTATGAAGGCTTAGAAACCGGAAAAGTGGGTTCGTT TCATTTGGAAATGTCTGAGAAAGAACCCGATCTTTGCCACGGGTTGCCTCTTTGATGCAG ACGGAAGAGAAACAGAACATGAGTGCAAAATGCAGAACAGAGTATTAAGTTTTGTTCTTT TGATTGATCAAAGCTTTTATATATTTCTGAGTCCGAGAAAGTGGCGGCAATAGTAATGGC AGTTGGTTGGTACTTGACAGTCAAAAGGCAAAAGATTTTGTATGTTTAGCACTAGATAGC CTTGGCCCTAATTTATACCCTTACCGTGTAACAGTTTAGGAAACAACAGTTTTGCCAGAT TATATTGGACATGAGTATTGAATGATTTTGTTGTTTCGATCTCAAACTAGTATGCTTAAC