Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G16785.4
CDS Infomation	\| phospholipase D P1 \| Chr3:5711329-5718696 FORWARD LENGTH=3420 \| 201606
Sequence	ATGGCATCTGAGCAGTTGATGTCTCCCGCCAGTGGTGGTGGACGCTACTTTCAGATGCAG CCTGAGCAATTTCCTTCGATGGTCTCTTCGCTCTTCTCTTTCGCGCCGGCTCCTACGCAG GAGACTAATCGTATTTTTGAAGAATTACCAAAAGCAGTGATCGTCTCTGTCTCTCGCCCT GATGCCGGCGATATTAGCCCTGTACTCTTGTCTTACACCATTGAGTGCCAATACAAGCAG TTCAAGTGGCAGCTTGTGAAGAAAGCATCTCAAGTCTTTTATTTGCATTTTGCATTGAAG AAACGTGCTTTTATTGAAGAAATTCACGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAA AATCTAGGAATAGGGGATCATCCACCCGTTGTGCAAGATGAAGATGCTGATGAAGTTCCG CTACATCAAGATGAAAGTGCCAAAAATAGAGATGTTCCTTCGAGCGCTGCTTTGCCAGTC ATTCGTCCTTTGGGAAGACAGCAGTCCATATCAGTTAGAGGAAAGCATGCAATGCAAGAA TATCTGAATCATTTTCTGGGGAATCTTGATATCGTCAATTCACGGGAGGTTTGCAGGTTT TTGGAGGTTTCGATGTTGTCATTCTCACCAGAGTATGGGCCCAAATTGAAAGAAGACTAT ATCATGGTAAAACATCTACCGAAGTTTTCAAAGAGTGATGATGATTCTAATAGATGTTGT GGGTGCTGTTGGTTCTGTTGCTGCAACGATAATTGGCAAAAGGTGTGGGGGGTACTAAAG CCAGGTTTTCTCGCCTTATTGGAAGATCCATTTGATGCGAAGCTATTAGATATAATTGTT TTTGATGTCCTACCAGTTTCTAATGGAAATGATGGTGTGGATATATCACTAGCAGTAGAA CTGAAGGATCATAATCCTTTGCGGCATGCATTCAAGGTAACATCTGGAAACCGGAGTATA AGAATAAGGGCAAAGAATAGTGCAAAAGTTAAAGATTGGGTGGCTTCTATTAACGATGCT GCTCTTAGACCTCCTGAGGGTTGGTGCCATCCCCATCGCTTTGGCTCATATGCTCCGCCG AGGGGTTTGACGGATGACGGAAGTCAAGCCCAGTGGTTTGTAGATGGTGGAGCAGCTTTT GCAGCCATTGCTGCAGCGATTGAAAATGCTAAATCTGAGATTTTCATCTGTGGCTGGTGG GTGTGCCCAGAACTCTATCTTAGGCGTCCTTTTGACCCGCATACTTCATCCAGACTTGAT AACTTGTTGGAGAATAAAGCTAAGCAAGGAGTTCAGATATACATCCTTATCTACAAGGAG GTTGCTCTTGCTTTAAAGATCAACAGTGTATATAGCAAACGCAGGCTTCTTGGCATTCAT GAGAATGTGCGGGTACTTCGTTATCCTGATCATTTCTCAAGTGGTGTCTACCTCTGGTCT CACCATGAAAAACTCGTCATCGTCGATAATCAGGTTTGCTTTATCGGAGGGCTAGACTTG TGTTTTGGCCGATATGACACGTTTGAACATAAAGTTGGAGATAACCCTTCTGTGACATGG CCTGGAAAGGACTATTACAACCCCAGAGAGTCTGAACCCAATACTTGGGAGGATGCTCTG AAAGATGAATTAGAGCGTAAAAAGCATCCACGGATGCCTTGGCATGATGTGCATTGTGCT TTATGGGGACCACCTTGCCGTGATGTGGCTAGGCACTTTGTTCAACGCTGGAACTATGCT AAGAGAAACAAAGCACCATATGAGGATTCAATTCCGCTTCTTATGCCTCAACATCACATG GTTATACCCCACTACATGGGAAGGCAAGAGGAGTCAGACATTGAAAGCAAGAAAGAGGAA GACAGTATTAGAGGGATTAGAAGAGATGATTCATTTTCTTCTAGATCATCTTTGCAGGAC ATTCCATTACTTTTGCCTCACGAACCAGTTGATCAGGATGGTTCGAGTGGGGGGCATAAA GAAAATGGAACAAACAACAGAAATGGTCCTTTCTCTTTCCGGAAATCAAAAATTGAACCA GTTGATGGAGATACTCCTATGAGGGGCTTTGTAGATGATCGTAATGGGCTAGATCTTCCA GTAGCAAAGCGTGGTTCTAATGCAATAGATTCAGAGTGGTGGGAAACACAAGATCATGAT TATCAGGTTGGGTCGCCAGATGAGACTGGGCAAGTCGGTCCGAGAACTTCATGCCGCTGT CAGATTATACGAAGTGTCAGTCAGTGGTCTGCCGGTACAAGCCAAGTTGAAGAGAGTATC CATTCTGCTTACCGTTCTCTCATTGACAAAGCTGAACATTTTATCTACATTGAGAATCAG TTTTTCATATCAGGCCTTTCTGGAGATGACACAGTAAAGAACCGTGTCTTAGAAGCATTG TACAAGAGGATTTTGCGTGCCCATAACGAGAAGAAAATTTTCAGGGTTGTTGTTGTTATA CCTCTCCTCCCCGGTTTCCAGGGAGGTATTGACGACAGTGGTGCAGCATCTGTTAGAGCC ATAATGCATTGGCAGTATCGAACCATATACAGAGGACATAACTCAATATTGACTAATCTT TACAATACTATTGGCGTAAAGGCTCATGATTATATTTCCTTCTATGGCCTTAGGGCATAT GGTAAACTTTCTGAGGATGGACCTGTCGCCACTAGTCAGGTGTATGTTCACAGTAAAATC ATGATAGTTGATGACCGTGCTGCATTGATTGGATCTGCCAATATTAACGACCGGAGTTTG CTTGGCTCAAGAGATTCTGAGATTGGAGTACTAATCGAAGACACAGAGTTAGTAGATTCT CGCATGGCAGGAAAACCATGGAAGGCTGGAAAATTTTCTTCAAGTCTTAGGCTCTCTTTG TGGTCCGAACACCTTGGACTTCGTACTGGAGAGATCGACCAGATTATTGATCCCGTCTCT GATTCAACCTACAAGGAGATATGGATGGCAACCGCAAAGACAAACACAATGATATACCAG GATGTCTTCTCTTGTGTGCCCAATGATCTCATCCATTCAAGGTACAATTCCGGTCTATCT TTTCTTTCTTCACCTTTGGCCACTATCATTATTCCTTTTGAAACGAAAAGATTCCGGATT ATGATTAATCCATGGCATTGGATCGTAAAATCTCTTGAATATATACGCAGAATGGCCTTC AGACAAAGCCTATCGTATTGGAAAGAGAAGCTGGGACACACAACGATCGATTTGGGAATA GCACCAGAGAAGCTGGAGTCTTACCACAATGGAGACATCAAGAGAAGCGATCCAATGGAC AGACTAAAGGCGATAAAAGGACATCTCGTCTCTTTCCCTTTAGATTTCATGTGCAAAGAA GATCTAAGACCGGTCTTCAATGAGAGTGAATACTACGCCTCCCCTCAAGTCTTCCATTGA

Peptide Sequence

PEP ID	AT3G16785.4
PEP Infomation	\| phospholipase D P1 \| Chr3:5711329-5718696 FORWARD LENGTH=1139 \| 201606
Sequence	MASEQLMSPASGGGRYFQMQPEQFPSMVSSLFSFAPAPTQETNRIFEELPKAVIVSVSRP DAGDISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWLQ NLGIGDHPPVVQDEDADEVPLHQDESAKNRDVPSSAALPVIRPLGRQQSISVRGKHAMQE YLNHFLGNLDIVNSREVCRFLEVSMLSFSPEYGPKLKEDYIMVKHLPKFSKSDDDSNRCC GCCWFCCCNDNWQKVWGVLKPGFLALLEDPFDAKLLDIIVFDVLPVSNGNDGVDISLAVE LKDHNPLRHAFKVTSGNRSIRIRAKNSAKVKDWVASINDAALRPPEGWCHPHRFGSYAPP RGLTDDGSQAQWFVDGGAAFAAIAAAIENAKSEIFICGWWVCPELYLRRPFDPHTSSRLD NLLENKAKQGVQIYILIYKEVALALKINSVYSKRRLLGIHENVRVLRYPDHFSSGVYLWS HHEKLVIVDNQVCFIGGLDLCFGRYDTFEHKVGDNPSVTWPGKDYYNPRESEPNTWEDAL KDELERKKHPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEDSIPLLMPQHHM VIPHYMGRQEESDIESKKEEDSIRGIRRDDSFSSRSSLQDIPLLLPHEPVDQDGSSGGHK ENGTNNRNGPFSFRKSKIEPVDGDTPMRGFVDDRNGLDLPVAKRGSNAIDSEWWETQDHD YQVGSPDETGQVGPRTSCRCQIIRSVSQWSAGTSQVEESIHSAYRSLIDKAEHFIYIENQ FFISGLSGDDTVKNRVLEALYKRILRAHNEKKIFRVVVVIPLLPGFQGGIDDSGAASVRA IMHWQYRTIYRGHNSILTNLYNTIGVKAHDYISFYGLRAYGKLSEDGPVATSQVYVHSKI MIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSL WSEHLGLRTGEIDQIIDPVSDSTYKEIWMATAKTNTMIYQDVFSCVPNDLIHSRYNSGLS FLSSPLATIIIPFETKRFRIMINPWHWIVKSLEYIRRMAFRQSLSYWKEKLGHTTIDLGI APEKLESYHNGDIKRSDPMDRLKAIKGHLVSFPLDFMCKEDLRPVFNESEYYASPQVFH

Transcript Sequence

Transcript ID	AT3G16785.4
Transcript Infomation	\| phospholipase D P1 \| Chr3:5710935-5719192 FORWARD LENGTH=4310 \| 201606
Sequence	GCCGGATCCGGTATCGGAGTAAACCGGGAGAGAGAGGTCAAAGTCGACGTAGACGTAGAC ATAGTTCATGTTGTTCACTTTGCTTTCTTCGTGCACCTGTATATCAAAAACCAACACCGT GTGTATTCCTCTCTCTCTCTCTCTCTCCCCGACTTTTGAATTTTCCCTCAGATTTGTCTT CCTTTGTAATCCATTTTCGCTCTGGATCGATCTTCCTACGATTTGGTCTTCAGATTGATC GGTTTCTCATCGGAATTCCCGGGGGGGAGTATAAGCATAACGAAAAGGATCAAACTCAGG ATCAACGCGACGGGAGAATTGGAGATTTTTTGTTTGCTAGATCTTGAATTGAGCGATCGA ATTGGGTAATTGGAGGTTTGAAGAGATCAGAGAAATGGCATCTGAGCAGTTGATGTCTCC CGCCAGTGGTGGTGGACGCTACTTTCAGATGCAGCCTGAGCAATTTCCTTCGATGGTCTC TTCGCTCTTCTCTTTCGCGCCGGCTCCTACGCAGGAGACTAATCGTATTTTTGAAGAATT ACCAAAAGCAGTGATCGTCTCTGTCTCTCGCCCTGATGCCGGCGATATTAGCCCTGTACT CTTGTCTTACACCATTGAGTGCCAATACAAGCAGTTCAAGTGGCAGCTTGTGAAGAAAGC ATCTCAAGTCTTTTATTTGCATTTTGCATTGAAGAAACGTGCTTTTATTGAAGAAATTCA CGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGGGATCATCCACC CGTTGTGCAAGATGAAGATGCTGATGAAGTTCCGCTACATCAAGATGAAAGTGCCAAAAA TAGAGATGTTCCTTCGAGCGCTGCTTTGCCAGTCATTCGTCCTTTGGGAAGACAGCAGTC CATATCAGTTAGAGGAAAGCATGCAATGCAAGAATATCTGAATCATTTTCTGGGGAATCT TGATATCGTCAATTCACGGGAGGTTTGCAGGTTTTTGGAGGTTTCGATGTTGTCATTCTC ACCAGAGTATGGGCCCAAATTGAAAGAAGACTATATCATGGTAAAACATCTACCGAAGTT TTCAAAGAGTGATGATGATTCTAATAGATGTTGTGGGTGCTGTTGGTTCTGTTGCTGCAA CGATAATTGGCAAAAGGTGTGGGGGGTACTAAAGCCAGGTTTTCTCGCCTTATTGGAAGA TCCATTTGATGCGAAGCTATTAGATATAATTGTTTTTGATGTCCTACCAGTTTCTAATGG AAATGATGGTGTGGATATATCACTAGCAGTAGAACTGAAGGATCATAATCCTTTGCGGCA TGCATTCAAGGTAACATCTGGAAACCGGAGTATAAGAATAAGGGCAAAGAATAGTGCAAA AGTTAAAGATTGGGTGGCTTCTATTAACGATGCTGCTCTTAGACCTCCTGAGGGTTGGTG CCATCCCCATCGCTTTGGCTCATATGCTCCGCCGAGGGGTTTGACGGATGACGGAAGTCA AGCCCAGTGGTTTGTAGATGGTGGAGCAGCTTTTGCAGCCATTGCTGCAGCGATTGAAAA TGCTAAATCTGAGATTTTCATCTGTGGCTGGTGGGTGTGCCCAGAACTCTATCTTAGGCG TCCTTTTGACCCGCATACTTCATCCAGACTTGATAACTTGTTGGAGAATAAAGCTAAGCA AGGAGTTCAGATATACATCCTTATCTACAAGGAGGTTGCTCTTGCTTTAAAGATCAACAG TGTATATAGCAAACGCAGGCTTCTTGGCATTCATGAGAATGTGCGGGTACTTCGTTATCC TGATCATTTCTCAAGTGGTGTCTACCTCTGGTCTCACCATGAAAAACTCGTCATCGTCGA TAATCAGGTTTGCTTTATCGGAGGGCTAGACTTGTGTTTTGGCCGATATGACACGTTTGA ACATAAAGTTGGAGATAACCCTTCTGTGACATGGCCTGGAAAGGACTATTACAACCCCAG AGAGTCTGAACCCAATACTTGGGAGGATGCTCTGAAAGATGAATTAGAGCGTAAAAAGCA TCCACGGATGCCTTGGCATGATGTGCATTGTGCTTTATGGGGACCACCTTGCCGTGATGT GGCTAGGCACTTTGTTCAACGCTGGAACTATGCTAAGAGAAACAAAGCACCATATGAGGA TTCAATTCCGCTTCTTATGCCTCAACATCACATGGTTATACCCCACTACATGGGAAGGCA AGAGGAGTCAGACATTGAAAGCAAGAAAGAGGAAGACAGTATTAGAGGGATTAGAAGAGA TGATTCATTTTCTTCTAGATCATCTTTGCAGGACATTCCATTACTTTTGCCTCACGAACC AGTTGATCAGGATGGTTCGAGTGGGGGGCATAAAGAAAATGGAACAAACAACAGAAATGG TCCTTTCTCTTTCCGGAAATCAAAAATTGAACCAGTTGATGGAGATACTCCTATGAGGGG CTTTGTAGATGATCGTAATGGGCTAGATCTTCCAGTAGCAAAGCGTGGTTCTAATGCAAT AGATTCAGAGTGGTGGGAAACACAAGATCATGATTATCAGGTTGGGTCGCCAGATGAGAC TGGGCAAGTCGGTCCGAGAACTTCATGCCGCTGTCAGATTATACGAAGTGTCAGTCAGTG GTCTGCCGGTACAAGCCAAGTTGAAGAGAGTATCCATTCTGCTTACCGTTCTCTCATTGA CAAAGCTGAACATTTTATCTACATTGAGAATCAGTTTTTCATATCAGGCCTTTCTGGAGA TGACACAGTAAAGAACCGTGTCTTAGAAGCATTGTACAAGAGGATTTTGCGTGCCCATAA CGAGAAGAAAATTTTCAGGGTTGTTGTTGTTATACCTCTCCTCCCCGGTTTCCAGGGAGG TATTGACGACAGTGGTGCAGCATCTGTTAGAGCCATAATGCATTGGCAGTATCGAACCAT ATACAGAGGACATAACTCAATATTGACTAATCTTTACAATACTATTGGCGTAAAGGCTCA TGATTATATTTCCTTCTATGGCCTTAGGGCATATGGTAAACTTTCTGAGGATGGACCTGT CGCCACTAGTCAGGTGTATGTTCACAGTAAAATCATGATAGTTGATGACCGTGCTGCATT GATTGGATCTGCCAATATTAACGACCGGAGTTTGCTTGGCTCAAGAGATTCTGAGATTGG AGTACTAATCGAAGACACAGAGTTAGTAGATTCTCGCATGGCAGGAAAACCATGGAAGGC TGGAAAATTTTCTTCAAGTCTTAGGCTCTCTTTGTGGTCCGAACACCTTGGACTTCGTAC TGGAGAGATCGACCAGATTATTGATCCCGTCTCTGATTCAACCTACAAGGAGATATGGAT GGCAACCGCAAAGACAAACACAATGATATACCAGGATGTCTTCTCTTGTGTGCCCAATGA TCTCATCCATTCAAGGTACAATTCCGGTCTATCTTTTCTTTCTTCACCTTTGGCCACTAT CATTATTCCTTTTGAAACGAAAAGATTCCGGATTATGATTAATCCATGGCATTGGATCGT AAAATCTCTTGAATATATACGCAGAATGGCCTTCAGACAAAGCCTATCGTATTGGAAAGA GAAGCTGGGACACACAACGATCGATTTGGGAATAGCACCAGAGAAGCTGGAGTCTTACCA CAATGGAGACATCAAGAGAAGCGATCCAATGGACAGACTAAAGGCGATAAAAGGACATCT CGTCTCTTTCCCTTTAGATTTCATGTGCAAAGAAGATCTAAGACCGGTCTTCAATGAGAG TGAATACTACGCCTCCCCTCAAGTCTTCCATTGAGATCATTACATCAATTCTTGACTGCT GGCTTATTCAGTGACAGCTCTCTACACGAAGAATACTTCATTGCTACCTTTAACCATTTT CATCTCATATGTTTATGAGAAAGAATTAAAGATGTTTGTATAGCGATATGATATGTGCAA ACAGAGGAGGAAACTGAGAAGGGAAGCCATTTTGCTAGTTTTTGGTTTCTCTCTTCCGAG GTAAAGTAAAAAAAGAAAAGAAACAGGTCATTTTCTAAGTCAAATATTGGCTTACTATCT ATAACAGTGAATGTGTCACCCCACACAGACACATATGATTTGTAATTATGCGAAAAAAGA CTGAATAATATAATGTCGGTGTCGAGATCCACGAGGTGCCATGTGAATATGAAAATATGA TGTGACAATGAGTTTGGGTCTTATCTTTGTTTGTCTCTGAGTCAAACAACTCCATCTTTA CCACTTGCATCTCCTTTGTTGTGTCGTATTTTGTTCACAACCTGTTTGTA