Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G16710.1
CDS Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:5690020-5691543 FORWARD LENGTH=1524 | 201606
Sequence

ATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATCTTCATAGT
CATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCCTTTGTGGT
TTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACGGTCTTCAC
AATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTCGTCCCCTT
CCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATAGATATGAT
GTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTCTTTGTACT
TGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTTCGTGCTTT
CTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTTCTCTGCTT
AATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATCAGATTTTG
GGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTCTTTGTAAA
AACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATGGGAGTAGA
CCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTAGATGGGGT
GATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATGTAATCACT
TTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTAAAGAACTG
TACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTTCACTGATC
AATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATTTGATGGAA
AGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGATTTTGCAAG
TCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAGGAGTAGTT
GCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCAGACCTGAT
GTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATATTAGGACA
TACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCATTGATGATA
TTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCATCATTATT
CAAGGGATGTGCAAGCTTGGTAAGGTGGAAGATGCTTTTGATTTATTTTGTAGCCTTTTC
TCCAAAGGAATGAAGCCTAATGTTATAACCTACACCACAATGATATCGGGATTTTGTAGG
CGAGGCTTAATTCATGAAGCTGATTCGCTGTTTAAGAAAATGAAAGAAGATGGGTTCTTA
CCAAATGAAAGTGTGTACAAGTAG

Peptide Sequence

PEP ID

AT3G16710.1
PEP Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:5690020-5691543 FORWARD LENGTH=507 | 201606
Sequence

MRRSIATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLH
NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT
CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL
GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG
DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI
NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV
ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI
FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR
RGLIHEADSLFKKMKEDGFLPNESVYK

Transcript Sequence

Transcript ID

AT3G16710.1
Transcript Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:5689892-5691543 FORWARD LENGTH=1652 | 201606
Sequence

CTTCCACAAGTATACGAGAGAAGTTAGGTTTTCGTCTTCTTCAAGCTCACCTCCACCATT
TCTCTGCTCTTCTTGTTGTATAGAGTTCGAATTGCGCAGTGAAATGACTCAGAAGACATA
GATTGTGAATGCGTAGATCCATTGCGACTGGGTTTGCGTCGATAGTGAAGGGATTTCATC
TTCATAGTCATAGACATCGTCTACAGATAAGTAACCCTAGAACTGCTGCTTCCTTAAGCC
TTTGTGGTTTCTGTTTCTGGATTCGAGCTTTTTCTAGTTACCGAAAGATTTTGAGAAACG
GTCTTCACAATCTTCAGTTTAATGATGCTCTTGATTTGTTCACTCGTATGGTTCACTCTC
GTCCCCTTCCTTCAATTATCGATTTCACTAGATTATTGAGTGTTATTGCAAAGATGAATA
GATATGATGTTGTGATTTCTCTCTTTGAGCAAATGCAAATCCTGGGGATTCCACCTCTTC
TTTGTACTTGCAATATCGTTATGCATTGTGTTTGTCTATCTTCTCAGCCTTGTCGTGCTT
CGTGCTTTCTTGGGAAGATGATGAAACTTGGTTTTGAGCCTGACTTAGTCACGTTTACTT
CTCTGCTTAATGGTTACTGTCATTGGAATAGAATTGAGGATGCTATAGCTCTGTTTGATC
AGATTTTGGGAATGGGATTTAAACCTAATGTTGTGACATACACCACATTGATTCGCTGTC
TTTGTAAAAACCGACATTTGAATCACGCGGTGGAGCTTTTTAACCAGATGGGGACTAATG
GGAGTAGACCGAATGTTGTTACCTACAACGCTCTTGTTACCGGTCTTTGCGAGATTGGTA
GATGGGGTGATGCTGCTTGGCTTCTGAGGGATATGATGAAGAGGAGAATTGAACCTAATG
TAATCACTTTCACTGCGTTGATCGATGCGTTTGTGAAAGTGGGGAAGCTTATGGAGGCTA
AAGAACTGTACAATGTGATGATCCAAATGTCTGTGTATCCTGATGTTTTCACTTACGGTT
CACTGATCAATGGGCTTTGCATGTATGGTCTCTTAGATGAGGCTAGGCAAATGTTTTATT
TGATGGAAAGGAATGGTTGCTACCCGAATGAAGTGATTTATACTACTCTCATACATGGAT
TTTGCAAGTCTAAAAGGGTAGAGGACGGGATGAAAATCTTCTATGAGATGTCGCAGAAAG
GAGTAGTTGCAAACACAATCACTTACACCGTTCTTATCCAGGGTTATTGTCTAGTGGGCA
GACCTGATGTTGCCCAAGAAGTTTTCAATCAGATGAGTTCTCGTCGTGCGCCTCCAGATA
TTAGGACATACAACGTTTTGTTAGATGGTCTTTGTTGTAATGGGAAAGTAGAGAAGGCAT
TGATGATATTCGAATACATGCGGAAGAGAGAGATGGATATTAATATTGTTACATATACCA
TCATTATTCAAGGGATGTGCAAGCTTGGTAAGGTGGAAGATGCTTTTGATTTATTTTGTA
GCCTTTTCTCCAAAGGAATGAAGCCTAATGTTATAACCTACACCACAATGATATCGGGAT
TTTGTAGGCGAGGCTTAATTCATGAAGCTGATTCGCTGTTTAAGAAAATGAAAGAAGATG
GGTTCTTACCAAATGAAAGTGTGTACAAGTAG