Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G16540.1
CDS Infomation	\| DegP protease 11 \| Chr3:5626290-5628857 REVERSE LENGTH=1683 \| 201606
Sequence	ATGTTTTTCCGGCCGTGTGTTCATACGGTGGGCCGGTACTCGAGAGCTCGGGTTCCTGGT TTACTCTCTTCTCTTTTCTTTTACCGAAGTTGCAATAATGTACTGACCAATTCACTGCCA ACGGTAACAACGGCCGGCCGAGTTTCCAGATACGGATATATATGCAGGAGGAGCAGCACA TCAGCAGCGGAGAGGGGTGTGTTTCTTCCATTTGCGTTAACTTGCCGAAGAAATATCCAC TCAATACATGAAGATGAGAAGAAGCTAGAACGGTGGAAGAAAATAGAAGAAAGTCATCCT CTTGATGAATTGGTGCTGGATTCGGTTGTAAAGGTATTCTCTAACTCTACCGAGTATAGC AAATCCAAACCTTGGAAGACTCTTGACCAAAAATCATCCAGGGGCACTGGATTTGCAATC GCCGGAAGGAAAATTCTTACGAACGCTCATGTGGTGATGGCTATGAATGATCACACATTC GTGGACGTCAAAAGACATGGCTCTCAAATCAAATACAAAGCAAAAGTTCAAAAGATTTCA CATGAATGTGATTTGGCCATCTTGGAGATCGATAGTGACGAGTTTTGGAAGGGTATGAAT CCCTTGGAGCTTGGAGACATACCACCTCTCCAAGAAGTTGTGTCCGTTGTTGGTGGTGAA AATATCTGCATTACAAAAGGTCTAGTACTTAGAGTTGAAACTAGAATATACGATTACAGT GACAGTGATCTGCTATCAATACAGATTGATGCAACTATCAACGATGAAAATAGTGGTGGC CCGGTGATTATGGGAAACAAAGTCGTTGGTGTGGTATATGAAATAGGTTTTGTGATCCCA ACTCCAATAATTAAGCATTTCATAACTAGTGTTCAAGAGAGCAGACAATATTCTTGTTTC GGCTCATTGGATCTTTCATATCAATCTCTCGAAAATGTTCAAATCCGTAATCATTTCAAG ATGAGCCATGAAATGACAGGAATTCTTATTAACAAAATAAACTCGTCGTCGGGGGCTTAC AAAATTTTGAGAAAAGACGACATTATTCTTGCAATTGATGGTGTTCCAATAGGAAATGAT GAGAAAGTTCCTTTCCAAAACAAAAGACGGATAGATTTCAGCTACTTGGTTTCTATGAAG AAACCAGGTGAAAAAGCCTTAGTTAAAGTTTTACGAAACGGAAAAGAGTATGAGTACAAT ATCAGTCTAAAACCGGTGAAACCAAACTTTACAGTGCAACAATTTTATAATGTTCCAAGT TACTACATATTTGGGGGTTTTGTTTTTGTGCCTCTCACTAAAACATATCTTGATAGTGAA CATCACCAAGTCAAAATTTCCGAGAGATTAGCAGATGACATCAACGAAGGATACCAAAGT TTATATGGTGCTCAGGTGGAGAAAGTGAACGGAGTGGAAGTAAAGAATCTTAAGCATCTA TGCGAGCTAATAGAGGAATGTAGCACCGAAGATTTGAGGCTGGAGTTTAAAAATCATAAG GTTTTGGTCCTCAACTATGAATCTGCTAAAAAGGCAACGTTACAAATCTTGGAACGTCAC AAAATAAAGTCGGTCATATCAAAGGACATTTGTCTTCCTATGTTGCTTGATGATCCGTTC AAAGACAATAAGATCAACCTTCTTCCTTGGAGTGTTCTTCCTTTGATGTTTGATTTTTCC TAA

Peptide Sequence

PEP ID	AT3G16540.1
PEP Infomation	\| DegP protease 11 \| Chr3:5626290-5628857 REVERSE LENGTH=560 \| 201606
Sequence	MFFRPCVHTVGRYSRARVPGLLSSLFFYRSCNNVLTNSLPTVTTAGRVSRYGYICRRSST SAAERGVFLPFALTCRRNIHSIHEDEKKLERWKKIEESHPLDELVLDSVVKVFSNSTEYS KSKPWKTLDQKSSRGTGFAIAGRKILTNAHVVMAMNDHTFVDVKRHGSQIKYKAKVQKIS HECDLAILEIDSDEFWKGMNPLELGDIPPLQEVVSVVGGENICITKGLVLRVETRIYDYS DSDLLSIQIDATINDENSGGPVIMGNKVVGVVYEIGFVIPTPIIKHFITSVQESRQYSCF GSLDLSYQSLENVQIRNHFKMSHEMTGILINKINSSSGAYKILRKDDIILAIDGVPIGND EKVPFQNKRRIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFYNVPS YYIFGGFVFVPLTKTYLDSEHHQVKISERLADDINEGYQSLYGAQVEKVNGVEVKNLKHL CELIEECSTEDLRLEFKNHKVLVLNYESAKKATLQILERHKIKSVISKDICLPMLLDDPF KDNKINLLPWSVLPLMFDFS

Transcript Sequence

Transcript ID	AT3G16540.1
Transcript Infomation	\| DegP protease 11 \| Chr3:5626290-5628857 REVERSE LENGTH=1683 \| 201606
Sequence	ATGTTTTTCCGGCCGTGTGTTCATACGGTGGGCCGGTACTCGAGAGCTCGGGTTCCTGGT TTACTCTCTTCTCTTTTCTTTTACCGAAGTTGCAATAATGTACTGACCAATTCACTGCCA ACGGTAACAACGGCCGGCCGAGTTTCCAGATACGGATATATATGCAGGAGGAGCAGCACA TCAGCAGCGGAGAGGGGTGTGTTTCTTCCATTTGCGTTAACTTGCCGAAGAAATATCCAC TCAATACATGAAGATGAGAAGAAGCTAGAACGGTGGAAGAAAATAGAAGAAAGTCATCCT CTTGATGAATTGGTGCTGGATTCGGTTGTAAAGGTATTCTCTAACTCTACCGAGTATAGC AAATCCAAACCTTGGAAGACTCTTGACCAAAAATCATCCAGGGGCACTGGATTTGCAATC GCCGGAAGGAAAATTCTTACGAACGCTCATGTGGTGATGGCTATGAATGATCACACATTC GTGGACGTCAAAAGACATGGCTCTCAAATCAAATACAAAGCAAAAGTTCAAAAGATTTCA CATGAATGTGATTTGGCCATCTTGGAGATCGATAGTGACGAGTTTTGGAAGGGTATGAAT CCCTTGGAGCTTGGAGACATACCACCTCTCCAAGAAGTTGTGTCCGTTGTTGGTGGTGAA AATATCTGCATTACAAAAGGTCTAGTACTTAGAGTTGAAACTAGAATATACGATTACAGT GACAGTGATCTGCTATCAATACAGATTGATGCAACTATCAACGATGAAAATAGTGGTGGC CCGGTGATTATGGGAAACAAAGTCGTTGGTGTGGTATATGAAATAGGTTTTGTGATCCCA ACTCCAATAATTAAGCATTTCATAACTAGTGTTCAAGAGAGCAGACAATATTCTTGTTTC GGCTCATTGGATCTTTCATATCAATCTCTCGAAAATGTTCAAATCCGTAATCATTTCAAG ATGAGCCATGAAATGACAGGAATTCTTATTAACAAAATAAACTCGTCGTCGGGGGCTTAC AAAATTTTGAGAAAAGACGACATTATTCTTGCAATTGATGGTGTTCCAATAGGAAATGAT GAGAAAGTTCCTTTCCAAAACAAAAGACGGATAGATTTCAGCTACTTGGTTTCTATGAAG AAACCAGGTGAAAAAGCCTTAGTTAAAGTTTTACGAAACGGAAAAGAGTATGAGTACAAT ATCAGTCTAAAACCGGTGAAACCAAACTTTACAGTGCAACAATTTTATAATGTTCCAAGT TACTACATATTTGGGGGTTTTGTTTTTGTGCCTCTCACTAAAACATATCTTGATAGTGAA CATCACCAAGTCAAAATTTCCGAGAGATTAGCAGATGACATCAACGAAGGATACCAAAGT TTATATGGTGCTCAGGTGGAGAAAGTGAACGGAGTGGAAGTAAAGAATCTTAAGCATCTA TGCGAGCTAATAGAGGAATGTAGCACCGAAGATTTGAGGCTGGAGTTTAAAAATCATAAG GTTTTGGTCCTCAACTATGAATCTGCTAAAAAGGCAACGTTACAAATCTTGGAACGTCAC AAAATAAAGTCGGTCATATCAAAGGACATTTGTCTTCCTATGTTGCTTGATGATCCGTTC AAAGACAATAAGATCAACCTTCTTCCTTGGAGTGTTCTTCCTTTGATGTTTGATTTTTCC TAA