Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G16500.1
CDS Infomation	\| phytochrome-associated protein 1 \| Chr3:5612801-5614208 REVERSE LENGTH=810 \| 201606
Sequence	ATGGAAGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAA GGAAGGAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTA AGGCTTGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACA GAGATAAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAAT CACTTCTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCT CCTGGTCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACA AGCTCTTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGAT GGTGAAAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGT GTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTT GTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAA GGAGAAGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTAT GAAGACAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCA TCTGTGAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATTTGGA TGCAGTAAGCAAGAGAAGATGATGCACTGA

Peptide Sequence

PEP ID	AT3G16500.1
PEP Infomation	\| phytochrome-associated protein 1 \| Chr3:5612801-5614208 REVERSE LENGTH=269 \| 201606
Sequence	MEGCPRNREIGPKLLDLIPQGRKWYQEDKNNTDQEKKLELRLGPPGGDEEDHSAIKKKNT EIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLAST SSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSF VVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVS SVKRLRVIKSSEISSALTFGCSKQEKMMH

Transcript Sequence

Transcript ID	AT3G16500.1
Transcript Infomation	\| phytochrome-associated protein 1 \| Chr3:5612203-5614803 REVERSE LENGTH=2003 \| 201606
Sequence	GCGATATTTGAGGCAGAAAAAAAGACAAGGTTGCGTGTGTTTTACTCCACAAAAGAACTC CTAAAACCAAAAACGTTAAAACCCACTTCTTTTTTTTCACAGTATTCTCTTTTCATGTCA AGAACAATTACTGTTTTTCTTGGTATGCAATCTGTAAATTTATTGTAGTTTTCATTTCTA CTTTTGGGGTTTAGGAGTAAAAGTGGAGTCACTCTACTTTGCTTTACCTTTTTCTGAGTT TTTTTTTGTTCATACAAATCCAAATTTCCTTTTCTTTGTATTCCTATTTTTTCTCTTCTC GTCCCTTTCAGAATCTTTAGAGAGAGAGAACAACAAATTGAGAAAGAAAAAAAGGTAAGG CTGTGTGAGAGAGAACCCACCAAAGCGTGCACGAGAGAGAGAAAAAAAAAGCTTTGATTT TGTATAAAATCCCACCACTGCTCTCTTACCATACCTTCATTACACATCTCTCTTTCTCTC TCTCGCTCTCAGTTTTGTGGGATTGTTTCTTTAAAAGGGGTTCTTAGGGTTTAGTGAAGC TATAGATTTCAATTTCATACATAGTTAACGTATAGAAGGAATCTTGGGTTGATCAATGGA AGGTTGTCCAAGAAACAGAGAAATCGGTCCAAAACTTCTTGATTTGATTCCACAAGGAAG GAAATGGTACCAAGAAGACAAGAACAACACAGATCAGGAGAAGAAACTTGAGCTAAGGCT TGGACCACCCGGTGGTGATGAAGAAGATCATTCAGCAATCAAGAAGAAGAACACAGAGAT AAGAAACATCAAGAAGGAAACAGAAGACAAATCTTTCCACTGTTTTAATGGCAATCACTT CTCTCCTTCCAACAAAACCACTTCTGTTCCTCACATCTCACAGAAAAGAACTGCTCCTGG TCCAGTGGTGGGTTGGCCTCCGGTTCGTTCGTTCAGAAAGAATCTAGCGAGCACAAGCTC TTCAAAGCTAGGTAACGAATCCTCTCATGGAGGTCAAATCAACAAGAGTGATGATGGTGA AAAACAAGTTGAAACCAAGAAGGAAGGAATGTTTGTCAAGATCAACATGGATGGTGTTCC TATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGT TGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATATCTCTGATGGTCAAGGAGA AGAGAAACCTATCATTGGATTATTAGATGGGAAAGGAGAATTTACTTTAACCTATGAAGA CAATGAAGGGGACAAGATGCTTGTTGGGGATGTTCCATGGCAAATGTTTGTTTCATCTGT GAAGAGACTGCGTGTGATTAAAAGCTCTGAGATTTCATCTGCCTTGACATTTGGATGCAG TAAGCAAGAGAAGATGATGCACTGAAGAGTCTTTTTAGAAACTTTTATTTCAGACAGAGA GTCTCAAAGCTTTATAAATGTACATCTGGTTTTTGTTATATATAAGAGTTAATCATTGGT TTTTTACTTTTTTTTTGGTCCAGAGAAACATTTGATCTGATCTGATATTCCCATGTCTTC AAGACACTAGACGATGAGATTACATAAGCAATCTGTGTTTATAAGCATTTTAATTAATTA AGGAGATAATTAGAACATACTGTAATAATTATCTCATGCATGTCTGCAAAACTCTTTTTG AAAAAAGAAGATGAAATTTTTATTCTCTGTAAAAGCTCTTTTAACTTTTGTTCCTTCCAA CTTTGGCTATACCTTTAATCATGTAAAAAGCTGAGAATGAAAGGCCATTATTGTTGTTTT TGTTGTTGTCTTTTTTTTTCTTCTTGTTTTTACTATTTAACCTGAGTATGCATGTATATA AGAAGATAAGATTGGAAGTTGAAAACTCAAAAAAGACTTTTCAGAATGAGATCAGTCCAT GTCGTGATAATTTTGGTGGCTATATCATCTCTTTTGTTCTTCTAGGTGCAGAATTTAGCA GCTTTTTATCCTGACTTTTTAAA