Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G10660.1
CDS Infomation	\| calmodulin-domain protein kinase cdpk isoform 2 \| Chr3:3331599-3334268 REVERSE LENGTH=1941 \| 201606
Sequence	ATGGGTAATGCTTGCGTTGGACCAAACATTTCTGGAAATGGTTTCTTGCAAACTGTTACG GCTGCAATGTGGAGGCCACGGATCGGAGCTGAGCAAGCTTCTTCTTCTTCCCATGGTAAT GGACAAGTTTCTAAAGAAGCAGCTTCAGAACCAGCTACTGATCAAGTCCAGAATAAACCC CCTGAGCCTATCACAATGCCAAGCTCAAAGACCAATCCCGAAACTAAACTGAAACCCGAT CTAGAGATCCAACCTGAAGAAAAGAAGGAGAAAGTTCTTGCAGAAGAAACCAAGCAGAAA GTTGTTCCTGAAGAAAGTAAGCAGGAAGTTCCTCCTGAAGAAAGTAAGCGGGAAGTTGTT GTGCAGCCGGAGTCAGCAAAACCAGAAACAAAGTCTGAATCCAAGCCAGAGACAACAAAA CCAGAAACAACGTCTGAAACCAAGCCAGAGACGAAAGCTGAACCTCAGAAGCCTAAACAT ATGAGGAGAGTGTCCAGTGCAGGGCTTAGAACTGAGTCAGTGTTGCAGAGGAAAACTGAA AACTTTAAGGAGTTCTATTCATTAGGGAGGAAACTTGGACAAGGGCAATTTGGGACGACG TTTTTATGCCTTGAGAAAGGTACTGGGAACGAATATGCGTGCAAGTCGATTTCCAAGAGG AAGCTTTTGACTGATGAGGATGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCAC TTGGCTGGTCATCCGAATGTTATATCTATTAAAGGTGCTTATGAGGATGTTGTTGCGGTA CATCTTGTGATGGAGTTGTGTTCGGGTGGCGAGCTTTTTGATAGAATTATTCAACGTGGA CATTACACTGAGAGGAAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCT TGTCACTCTCTTGGTGTTATGCATCGGGACCTCAAGCCAGAGAATTTTCTATTTGTTAGT AGAGAGGAAGATTCCCTGTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTTAAGCCA GATGAGGTTTTTACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTTCTTAGA AAGCGTTATGGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATTTTGTTA AGCGGAGTTCCTCCTTTCTGGGCCGAAACCGAACAAGGTATTTTCGAGCAGGTCCTTCAT GGAGATCTTGACTTTTCATCTGATCCATGGCCAAGCATCTCTGAAAGCGCGAAAGACTTG GTAAGGAAAATGCTTGTTCGAGACCCCAAGCGAAGACTAACCGCACATCAAGTATTATGT CATCCATGGGTACAGATTGACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCTGTTCTG AGCCGTATGAAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGAGTCATA GCTGAGAGCTTATCTGAAGAAGAAATAGCCGGTTTAAAACAAATGTTCAAGATGATAGAC GCAGACAATAGTGGTCAGATCACTTTTGAAGAACTGAAAGCAGGACTAAAACGAGTTGGT GCCAATCTCAAAGAGTCAGAGATTCTTGATCTAATGCAAGCTGCTGATGTGGACAATAGC GGAACGATAGACTACAAAGAGTTCATAGCCGCCACATTGCATCTAAACAAAATAGAGAGA GAGGACCATTTGTTCGCCGCCTTCTCTTACTTTGACAAGGACGAGAGTGGCTTTATCACC CCGGACGAGCTTCAACAAGCTTGCGAAGAGTTTGGTGTTGAAGATGCCCGCATAGAAGAA ATGATGCGCGATGTTGATCAAGACAAGGATGGACGAATAGACTACAACGAGTTTGTGGCA ATGATGCAGAAAGGGAGCATAATGGGAGGACCTGTGAAGATGGGTTTAGAGAACAGCATT AGCATTTCTCTGAAACATTAG

Peptide Sequence

PEP ID	AT3G10660.1
PEP Infomation	\| calmodulin-domain protein kinase cdpk isoform 2 \| Chr3:3331599-3334268 REVERSE LENGTH=646 \| 201606
Sequence	MGNACVGPNISGNGFLQTVTAAMWRPRIGAEQASSSSHGNGQVSKEAASEPATDQVQNKP PEPITMPSSKTNPETKLKPDLEIQPEEKKEKVLAEETKQKVVPEESKQEVPPEESKREVV VQPESAKPETKSESKPETTKPETTSETKPETKAEPQKPKHMRRVSSAGLRTESVLQRKTE NFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHH LAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEA CHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLR KRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDL VRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVI AESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNS GTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEFGVEDARIEE MMRDVDQDKDGRIDYNEFVAMMQKGSIMGGPVKMGLENSISISLKH

Transcript Sequence

Transcript ID	AT3G10660.1
Transcript Infomation	\| calmodulin-domain protein kinase cdpk isoform 2 \| Chr3:3331066-3334986 REVERSE LENGTH=3192 \| 201606
Sequence	TTTGATTATTCTATCGCCTGCTGCTGCTGGAACGAGTTGGTAATAGAAAACAAATTCATA ATTTATGACAAGAAGAACGCAAAATTCGCTGATGATTATTAAACCCAAACGCGTTTTTCA AACTCGTTCAATCAATTTCCTTCATCATCTTCATCTTCTTCGTAATTGACTTATCGAACA AGATTACACCTCCCTTTAGCTTTTTATGCAAATGTAGTGCTTTTAAGCATTCTCTCGATT TCCCTCCCTTATTTTCCGACAAATACCAAACCAATATTGTTCCTTTTCTTTTCAATCCCA GATCGATCTCTTTGTTTTCAGACAATTTCTGTTGTCTGGATTCGGTTCATTGCATCGTTC TTTGTGTTGGGTTCGTTTAAACTTTCGATTTTCCCATTTTGAAAATTTTGATTTTTTTCT TGTGGCAGATTGATTGTTGTTGTGCAAGATTCATCCGTTGCATCGACCCGAGTAGGGTTT TTGCTTGTTCCATCGGTGTTCGGAGTTTTTAAAATCATTGCCTGATCCGGAGTGATCAAA TCCTATATATTGTCGTTGCACAAGAGAACCAAGTCTTAGATTATAAAGAGATTTGACTTT CACTTTTAGTGTCTATGATCATTAGGAATGAGATCAGATCAGGTCAATTTGTGTTCTTTT GATCAGATCTTGATGTGGAAAGCTTGATGCTGTTGATTATAAGTAGAGAGATATTTTGAT GGGTAATGCTTGCGTTGGACCAAACATTTCTGGAAATGGTTTCTTGCAAACTGTTACGGC TGCAATGTGGAGGCCACGGATCGGAGCTGAGCAAGCTTCTTCTTCTTCCCATGGTAATGG ACAAGTTTCTAAAGAAGCAGCTTCAGAACCAGCTACTGATCAAGTCCAGAATAAACCCCC TGAGCCTATCACAATGCCAAGCTCAAAGACCAATCCCGAAACTAAACTGAAACCCGATCT AGAGATCCAACCTGAAGAAAAGAAGGAGAAAGTTCTTGCAGAAGAAACCAAGCAGAAAGT TGTTCCTGAAGAAAGTAAGCAGGAAGTTCCTCCTGAAGAAAGTAAGCGGGAAGTTGTTGT GCAGCCGGAGTCAGCAAAACCAGAAACAAAGTCTGAATCCAAGCCAGAGACAACAAAACC AGAAACAACGTCTGAAACCAAGCCAGAGACGAAAGCTGAACCTCAGAAGCCTAAACATAT GAGGAGAGTGTCCAGTGCAGGGCTTAGAACTGAGTCAGTGTTGCAGAGGAAAACTGAAAA CTTTAAGGAGTTCTATTCATTAGGGAGGAAACTTGGACAAGGGCAATTTGGGACGACGTT TTTATGCCTTGAGAAAGGTACTGGGAACGAATATGCGTGCAAGTCGATTTCCAAGAGGAA GCTTTTGACTGATGAGGATGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCACTT GGCTGGTCATCCGAATGTTATATCTATTAAAGGTGCTTATGAGGATGTTGTTGCGGTACA TCTTGTGATGGAGTTGTGTTCGGGTGGCGAGCTTTTTGATAGAATTATTCAACGTGGACA TTACACTGAGAGGAAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCTTG TCACTCTCTTGGTGTTATGCATCGGGACCTCAAGCCAGAGAATTTTCTATTTGTTAGTAG AGAGGAAGATTCCCTGTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTTAAGCCAGA TGAGGTTTTTACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTTCTTAGAAA GCGTTATGGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATTTTGTTAAG CGGAGTTCCTCCTTTCTGGGCCGAAACCGAACAAGGTATTTTCGAGCAGGTCCTTCATGG AGATCTTGACTTTTCATCTGATCCATGGCCAAGCATCTCTGAAAGCGCGAAAGACTTGGT AAGGAAAATGCTTGTTCGAGACCCCAAGCGAAGACTAACCGCACATCAAGTATTATGTCA TCCATGGGTACAGATTGACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCTGTTCTGAG CCGTATGAAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGAGTCATAGC TGAGAGCTTATCTGAAGAAGAAATAGCCGGTTTAAAACAAATGTTCAAGATGATAGACGC AGACAATAGTGGTCAGATCACTTTTGAAGAACTGAAAGCAGGACTAAAACGAGTTGGTGC CAATCTCAAAGAGTCAGAGATTCTTGATCTAATGCAAGCTGCTGATGTGGACAATAGCGG AACGATAGACTACAAAGAGTTCATAGCCGCCACATTGCATCTAAACAAAATAGAGAGAGA GGACCATTTGTTCGCCGCCTTCTCTTACTTTGACAAGGACGAGAGTGGCTTTATCACCCC GGACGAGCTTCAACAAGCTTGCGAAGAGTTTGGTGTTGAAGATGCCCGCATAGAAGAAAT GATGCGCGATGTTGATCAAGACAAGGATGGACGAATAGACTACAACGAGTTTGTGGCAAT GATGCAGAAAGGGAGCATAATGGGAGGACCTGTGAAGATGGGTTTAGAGAACAGCATTAG CATTTCTCTGAAACATTAGTTACAAACCCAAATCAAGAAGTACTTCGTCTATTTATTTTG TTATGAATGATGATGATCATGATTGTGTTTATCTCAACATTTTGATGAGATTTTTGTTCG TTAGACTGGTTTAGGTAAATCTGTTTCTGTACTATGTACTTTTATGCATATACACATAGC TTTTGTCTGTAACTTTTGGTCATAAGTTATCTTTTTAAAATTTTAAAAGTACAGTCAGGT ACAGAGAGAGAATCGAATCCATTCGAGGTCAAGTAATTTTGTTTTTATTTTATTTTCCTT CGAATTTTTACACATTTCTAAACTGGAGATTTGTTTGTTAGTGGTTGTAGGGCCCATGTT GTCCTCTAAAGCCCAGCCCACTAAGTATCACCGTTTTACTTGGAGATATTTATTAGTGTG ACTGGAGTATTGTCAAGCGCTAAATCTTAACCATCGGATCAATTAATCTTACGGCTGAAA ATGATCTTGGGTTCGTATTTTACGTGACAGTCGGTATCGCTAGTGTGTCTTTACCGGAAA GACGAATATACC