Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G08840.7
CDS Infomation	\| D-alanine-D-alanine ligase family \| Chr3:2679776-2686157 REVERSE LENGTH=2850 \| 201606
Sequence	ATGGCGTCCATGGCGACCGGCGTCAGTTTTTCGATGACTAGCGGCATAGGAGAAGGAGGA TACGATGTTCATCGAGTAGCGACGGCTGCACGGACAACTCTGAAGCTGAATCAGAAGAAC TCACTGAGCGAGAGTACATGCATGCTTTTGGGGATGAATAAGTATCGGGGATCCGGAGCT ATACGAACCGTCTCGAAGGCTGTCGGTTACGGACAAGAGATGAGTAAGAGTCTGAGGGTG GGACTCATTTGCGGAGGTCCGTCGGCGGAGCGCGGGATTTCTCTCAACTCTGCTAGATCA GTTCTCGATCATATTCAGGGTGATGGTATAAACGTGAGCTGCTATTATATAGATCCTGAT CTCAAAGCCTTTGCAATTTCATCCGCTCAGGTGTACTCGAATACTCCTTCAGATTTCGAT TTTAAGCTGGAGAGTCTTGCACAGGGATTCTCGTCATTATCCGAATTGGCCGAGCATCTT GTTTCTGCTGTGGACATTGTTTTTCCAGTAATTCATGGTCGATTTGGTGAAGATGGGGGC ATTCAGGAGCTGTTGGAAAGTCACAACATTCCATTTGTGGGGACTGGATCCCGTGAATGT TTTCGAGCATTTGACAAGTATGAAGCCTCTTTGGAGCTCAAGGAACTTGGTTTCATGACA GTACCAAACTACTTGGTGCAGGGAACTGGAGTAGACAAAAGTGAAATAGCACTGTGGTTT ACAGATAACCAGCTGGATCTCGAGATGGGAAAAGTTGTGGTAAAACCAGCTAAAGCAGGT TCAAGCATTGGTGTCAAGGTTGCTTTTGGCGTAAATGATTCAATTAAAAAGGCTACTGAA CTTATTCTAGAGGGAATTGATGATAGAGTTGTTGTTGAGGTGTTTATTGAAGATGCATAT GAGTTCACTGCCATCGTCCTGGATGTGGGTTCTGGTTCTGTTTGCCATCCTGTTGTTTTG ATGCCTACTGAGGTGCAACTTCAGTTTCATGGCATTGGTGATCCAAAGGAAAACGCAATC TTCGACTATCGGAGGAAGTATCTGCCGACACAGCAGGTCACCTATCACACTCCTCCACGT TTCCCTATCCATGTTATCAAAAGTATTCGTGAAGAGGCATCTCTTATATTTCAAAAGCTT GGTTTACGTGACTTTGCTCGCATTGATGGATGGTATTTGGCTCCCAATTCAAATTTATCA TCACCTGTAAGTGAAACGCTTGGAGGAACCAAGTCAGGAGATATTATATTCACAGACATC AACCTGATAAGTGGCATGGAGCAAACTAGCTTTCTCTTCCAGCAGGCATCTAAGGTTGGA TTTTCTCATTCAAACATTCTGCGAACAATCGTCCACCGTGCTTGCTCGAGGTTTCCCCAT CTTGATTGGTATAATTATGGGTATAGTCAATTACTCCAAGGTTCAACAACCCTGGAAGTC TCTGAGGACCCCCAGAAAGTGTTTGTCATATTTGGAGGAGATACTTCAGAGCGGCAGGTG TCCGTCATGAGTGGAACAAATGTCTGGGTCAATTTGCAAAGATATGTAGATCTTAATGTA ACTCCCTGTTTGCTTTCCCCCTCACTTAGCAACTCATTAGGCGCATCTTCGAACTTGGAC AATAGAGAAGTCTGGGTTTTGCCCTACTCGGTTGTGCTAAGGCACACTGCTGAGGAAGTT CTTGCAGCGTGCTTAGAAGCAGTCGAGCCTGTTAGGGCTTTATTTACATCTCTGCTGCAG AAGCAAGTGATGGAGGATCTTATGGATGGTTTTAAGAATCAAAGCTGGTTTGCAGGGTTT GATATAACAGACGAGCTGCCCAGAAAGTACTCATTGAAAGAGTGGATCAAGCATGCCAAG GAAGCTCAAGCAACTGTCTTCATTGCAGTGCATGGAGGAATTGGTGAAGATGGTACACTG CAGGGCTTGCTGGAGGATGAAGGAGTTTCTTATACAGGTCCAGGCGTACTAGCTTCAAGG ACTTGTATGGACAAGGTTATGACATCTCAGGCTCTTAGTAATCTTTCAGAGTTTGGAATT CATACCATAAGCAAAGATGTGAAGAGAACAGAGGATATAATGCATGAGACCTTCCCAAAT GTTTGGGATGAATTAATCAAGAAGCTTCAGTGTCTCACACTATGTGTTAAACCAGCAAAG GATGGATGTTCCACTGGCGTTGCAAGATTATGTTCCTCTGAAGACCTTGCTGTATATGTA CAAGCTTTGAAAGATTGTATACCAAGAATTCCTCCAAACACTCTTTCTAAGACACATGGA ATGATTGAGATGCCAAATCCTACTCCAGAATTCTTGATTTTTGAACCATTTGTCGAAACC GATGAAATCATAGTTTCATCCAAAGCCAAGCAGCAGCTCTCTTGGAAAGGTAGGAGGCGG TGGGTAGAGATGACTGTGGGTGTAATTGGAAAGCGTGGGTCAATGCATTCACTGAGTCCT AGTCTTACTGTCAAGGAAAGTGGGGATATATTGTCTCTCGAGGAAAAGTTCCAAGGAGGC ACTGGCATAAATCTTACTCCACCTCCACCAACAATCATGAGTAAGGAAGCTTTGGAGAGA TGCAAACAAGGCATTGAGCTGATTGCAGAAACTCTCGGCTTAGAAGGGTTTTCACGGATC GATGCTTTTGTGCATGTTGAAACCGGAGAGGTGCTGGTTATAGAGGTAAACACAGTTCCC GGAATGACTCCTTCCACTGTTTTAATCCAACAGGTGACTTTTGCATTCCTATTTGTCCAA CAGAAGTGTTGTTTACAATTTCAATCTAATCTTTACCATAAACACATATTCGAAAGATTT GTACTTGGAATTCTCCTCATGAGTACATAG

Peptide Sequence

PEP ID	AT3G08840.7
PEP Infomation	\| D-alanine-D-alanine ligase family \| Chr3:2679776-2686157 REVERSE LENGTH=949 \| 201606
Sequence	MASMATGVSFSMTSGIGEGGYDVHRVATAARTTLKLNQKNSLSESTCMLLGMNKYRGSGA IRTVSKAVGYGQEMSKSLRVGLICGGPSAERGISLNSARSVLDHIQGDGINVSCYYIDPD LKAFAISSAQVYSNTPSDFDFKLESLAQGFSSLSELAEHLVSAVDIVFPVIHGRFGEDGG IQELLESHNIPFVGTGSRECFRAFDKYEASLELKELGFMTVPNYLVQGTGVDKSEIALWF TDNQLDLEMGKVVVKPAKAGSSIGVKVAFGVNDSIKKATELILEGIDDRVVVEVFIEDAY EFTAIVLDVGSGSVCHPVVLMPTEVQLQFHGIGDPKENAIFDYRRKYLPTQQVTYHTPPR FPIHVIKSIREEASLIFQKLGLRDFARIDGWYLAPNSNLSSPVSETLGGTKSGDIIFTDI NLISGMEQTSFLFQQASKVGFSHSNILRTIVHRACSRFPHLDWYNYGYSQLLQGSTTLEV SEDPQKVFVIFGGDTSERQVSVMSGTNVWVNLQRYVDLNVTPCLLSPSLSNSLGASSNLD NREVWVLPYSVVLRHTAEEVLAACLEAVEPVRALFTSLLQKQVMEDLMDGFKNQSWFAGF DITDELPRKYSLKEWIKHAKEAQATVFIAVHGGIGEDGTLQGLLEDEGVSYTGPGVLASR TCMDKVMTSQALSNLSEFGIHTISKDVKRTEDIMHETFPNVWDELIKKLQCLTLCVKPAK DGCSTGVARLCSSEDLAVYVQALKDCIPRIPPNTLSKTHGMIEMPNPTPEFLIFEPFVET DEIIVSSKAKQQLSWKGRRRWVEMTVGVIGKRGSMHSLSPSLTVKESGDILSLEEKFQGG TGINLTPPPPTIMSKEALERCKQGIELIAETLGLEGFSRIDAFVHVETGEVLVIEVNTVP GMTPSTVLIQQVTFAFLFVQQKCCLQFQSNLYHKHIFERFVLGILLMST

Transcript Sequence

Transcript ID	AT3G08840.7
Transcript Infomation	\| D-alanine-D-alanine ligase family \| Chr3:2679488-2686280 REVERSE LENGTH=3261 \| 201606
Sequence	GAAAGCTTTTTGTTTCGATGACTGTTTTACTGACTTGTGAGTTCTGACTGACGATGAAAA AAATAAAAAGTTCCTCAAGGAGGTGTAAAGATTATTGTACGGAGAATTAAGCTTCCTTTG GAGATGGCGTCCATGGCGACCGGCGTCAGTTTTTCGATGACTAGCGGCATAGGAGAAGGA GGATACGATGTTCATCGAGTAGCGACGGCTGCACGGACAACTCTGAAGCTGAATCAGAAG AACTCACTGAGCGAGAGTACATGCATGCTTTTGGGGATGAATAAGTATCGGGGATCCGGA GCTATACGAACCGTCTCGAAGGCTGTCGGTTACGGACAAGAGATGAGTAAGAGTCTGAGG GTGGGACTCATTTGCGGAGGTCCGTCGGCGGAGCGCGGGATTTCTCTCAACTCTGCTAGA TCAGTTCTCGATCATATTCAGGGTGATGGTATAAACGTGAGCTGCTATTATATAGATCCT GATCTCAAAGCCTTTGCAATTTCATCCGCTCAGGTGTACTCGAATACTCCTTCAGATTTC GATTTTAAGCTGGAGAGTCTTGCACAGGGATTCTCGTCATTATCCGAATTGGCCGAGCAT CTTGTTTCTGCTGTGGACATTGTTTTTCCAGTAATTCATGGTCGATTTGGTGAAGATGGG GGCATTCAGGAGCTGTTGGAAAGTCACAACATTCCATTTGTGGGGACTGGATCCCGTGAA TGTTTTCGAGCATTTGACAAGTATGAAGCCTCTTTGGAGCTCAAGGAACTTGGTTTCATG ACAGTACCAAACTACTTGGTGCAGGGAACTGGAGTAGACAAAAGTGAAATAGCACTGTGG TTTACAGATAACCAGCTGGATCTCGAGATGGGAAAAGTTGTGGTAAAACCAGCTAAAGCA GGTTCAAGCATTGGTGTCAAGGTTGCTTTTGGCGTAAATGATTCAATTAAAAAGGCTACT GAACTTATTCTAGAGGGAATTGATGATAGAGTTGTTGTTGAGGTGTTTATTGAAGATGCA TATGAGTTCACTGCCATCGTCCTGGATGTGGGTTCTGGTTCTGTTTGCCATCCTGTTGTT TTGATGCCTACTGAGGTGCAACTTCAGTTTCATGGCATTGGTGATCCAAAGGAAAACGCA ATCTTCGACTATCGGAGGAAGTATCTGCCGACACAGCAGGTCACCTATCACACTCCTCCA CGTTTCCCTATCCATGTTATCAAAAGTATTCGTGAAGAGGCATCTCTTATATTTCAAAAG CTTGGTTTACGTGACTTTGCTCGCATTGATGGATGGTATTTGGCTCCCAATTCAAATTTA TCATCACCTGTAAGTGAAACGCTTGGAGGAACCAAGTCAGGAGATATTATATTCACAGAC ATCAACCTGATAAGTGGCATGGAGCAAACTAGCTTTCTCTTCCAGCAGGCATCTAAGGTT GGATTTTCTCATTCAAACATTCTGCGAACAATCGTCCACCGTGCTTGCTCGAGGTTTCCC CATCTTGATTGGTATAATTATGGGTATAGTCAATTACTCCAAGGTTCAACAACCCTGGAA GTCTCTGAGGACCCCCAGAAAGTGTTTGTCATATTTGGAGGAGATACTTCAGAGCGGCAG GTGTCCGTCATGAGTGGAACAAATGTCTGGGTCAATTTGCAAAGATATGTAGATCTTAAT GTAACTCCCTGTTTGCTTTCCCCCTCACTTAGCAACTCATTAGGCGCATCTTCGAACTTG GACAATAGAGAAGTCTGGGTTTTGCCCTACTCGGTTGTGCTAAGGCACACTGCTGAGGAA GTTCTTGCAGCGTGCTTAGAAGCAGTCGAGCCTGTTAGGGCTTTATTTACATCTCTGCTG CAGAAGCAAGTGATGGAGGATCTTATGGATGGTTTTAAGAATCAAAGCTGGTTTGCAGGG TTTGATATAACAGACGAGCTGCCCAGAAAGTACTCATTGAAAGAGTGGATCAAGCATGCC AAGGAAGCTCAAGCAACTGTCTTCATTGCAGTGCATGGAGGAATTGGTGAAGATGGTACA CTGCAGGGCTTGCTGGAGGATGAAGGAGTTTCTTATACAGGTCCAGGCGTACTAGCTTCA AGGACTTGTATGGACAAGGTTATGACATCTCAGGCTCTTAGTAATCTTTCAGAGTTTGGA ATTCATACCATAAGCAAAGATGTGAAGAGAACAGAGGATATAATGCATGAGACCTTCCCA AATGTTTGGGATGAATTAATCAAGAAGCTTCAGTGTCTCACACTATGTGTTAAACCAGCA AAGGATGGATGTTCCACTGGCGTTGCAAGATTATGTTCCTCTGAAGACCTTGCTGTATAT GTACAAGCTTTGAAAGATTGTATACCAAGAATTCCTCCAAACACTCTTTCTAAGACACAT GGAATGATTGAGATGCCAAATCCTACTCCAGAATTCTTGATTTTTGAACCATTTGTCGAA ACCGATGAAATCATAGTTTCATCCAAAGCCAAGCAGCAGCTCTCTTGGAAAGGTAGGAGG CGGTGGGTAGAGATGACTGTGGGTGTAATTGGAAAGCGTGGGTCAATGCATTCACTGAGT CCTAGTCTTACTGTCAAGGAAAGTGGGGATATATTGTCTCTCGAGGAAAAGTTCCAAGGA GGCACTGGCATAAATCTTACTCCACCTCCACCAACAATCATGAGTAAGGAAGCTTTGGAG AGATGCAAACAAGGCATTGAGCTGATTGCAGAAACTCTCGGCTTAGAAGGGTTTTCACGG ATCGATGCTTTTGTGCATGTTGAAACCGGAGAGGTGCTGGTTATAGAGGTAAACACAGTT CCCGGAATGACTCCTTCCACTGTTTTAATCCAACAGGTGACTTTTGCATTCCTATTTGTC CAACAGAAGTGTTGTTTACAATTTCAATCTAATCTTTACCATAAACACATATTCGAAAGA TTTGTACTTGGAATTCTCCTCATGAGTACATAGACGATAACATGTTCTTTGTTTTGTTTT GGGATATTGGAAACCTAAAGGCATTAGCAGAGCAGCCGCCAATGTACCCTCCTCAATTCT TTCGCACTCTGCTCCATCTTGCTACGCAGAGAGTTGTGTAAGCTTTTCTTTGTCTTTCGT ATTTACATTATTCCCAAGTTTAGTGTGTTTTTTGTAAATTCGATGCCTTCGTCATATGAT TAAAATAAAGTGGATCCCATATGTATGAGCTATGATTTGAATTTCATTTCGGTATATATT TTATGAATTGTAAATTTGCAA