Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G08820.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2677122-2679179 REVERSE LENGTH=2058 \| 201606
Sequence	ATGAGCATCGTCACCGTTCCATCAGCAACATCAAAAGTCCAGCAGATCAAAACTCTAATC TCCGTCGCATGCACCGTCAATCATCTGAAACAAATCCACGTCTCTCTCATTAACCACCAT CTCCACCACGACACCTTCCTCGTCAACCTCCTCCTCAAGCGAACTCTCTTCTTCCGCCAA ACCAAATACTCCTATCTCCTCTTCTCTCATACCCAATTCCCCAACATTTTCCTCTACAAT AGTCTCATCAATGGCTTCGTCAATAATCATCTCTTCCATGAAACCCTCGATCTCTTCCTC TCCATCCGCAAACATGGTCTCTACCTCCATGGTTTCACCTTCCCTTTGGTTCTCAAGGCA TGCACCAGAGCCTCGAGTCGCAAGCTTGGGATTGATCTTCATTCCCTTGTGGTCAAATGT GGGTTTAATCACGATGTGGCCGCTATGACGAGCCTGCTCTCTATCTACTCTGGATCCGGG CGTTTGAATGATGCCCACAAACTGTTCGACGAAATTCCTGACAGAAGCGTTGTTACTTGG ACGGCTTTGTTTAGTGGGTATACTACTTCAGGAAGACACAGGGAAGCCATTGATTTGTTT AAGAAGATGGTGGAGATGGGTGTGAAACCCGATAGCTACTTTATTGTTCAGGTTTTATCT GCTTGTGTTCATGTAGGGGATCTCGACAGTGGGGAGTGGATAGTTAAGTACATGGAAGAG ATGGAGATGCAGAAGAATTCCTTTGTGCGGACAACACTTGTCAATCTCTATGCCAAGTGT GGGAAGATGGAGAAAGCACGTTCTGTTTTCGACTCGATGGTGGAGAAAGATATAGTTACT TGGAGCACTATGATACAAGGGTATGCATCGAACAGCTTCCCAAAAGAAGGAATAGAGTTA TTTCTCCAGATGTTGCAGGAAAATCTGAAACCGGACCAGTTTTCTATTGTCGGGTTTCTT TCGTCTTGTGCAAGCTTAGGAGCCCTTGATCTAGGTGAATGGGGAATTAGTTTAATAGAT AGGCATGAGTTTTTGACCAATCTGTTTATGGCCAATGCCCTGATCGACATGTACGCGAAA TGTGGGGCTATGGCTCGAGGTTTTGAAGTATTTAAAGAAATGAAGGAGAAAGATATAGTT ATCATGAATGCTGCAATTTCTGGTCTGGCCAAGAATGGCCACGTTAAGCTCTCATTTGCG GTTTTTGGACAAACAGAGAAGTTAGGTATCTCACCTGATGGGTCCACGTTCCTTGGACTG CTCTGTGGGTGCGTTCACGCAGGCCTAATCCAAGACGGGCTTCGGTTTTTCAATGCCATA AGCTGTGTTTATGCTTTGAAACGCACGGTTGAGCACTATGGTTGCATGGTAGATCTTTGG GGCAGAGCAGGAATGTTAGATGACGCATACCGTTTGATCTGCGATATGCCCATGAGGCCA AACGCGATAGTCTGGGGAGCGTTACTGAGCGGATGCAGACTGGTCAAAGATACGCAGTTA GCTGAAACTGTTCTCAAAGAGCTCATCGCTTTGGAGCCATGGAATGCAGGAAACTATGTT CAATTATCCAACATATACTCTGTTGGTGGCAGATGGGACGAAGCTGCTGAAGTAAGGGAC ATGATGAACAAGAAAGGTATGAAGAAGATCCCGGGATATAGTTGGATCGAGTTGGAAGGG AAGGTCCATGAGTTTCTAGCAGATGATAAATCTCATCCTCTAAGCGACAAGATATATGCA AAGCTAGAAGATTTGGGTAATGAAATGAGGCTTATGGGTTTTGTTCCAACGACAGAATTT GTTTTCTTCGATGTTGAAGAGGAAGAAAAAGAAAGGGTCTTGGGGTATCACAGCGAGAAG CTTGCGGTTGCGTTAGGGCTGATCAGTACGGATCATGGCCAAGTGATTCGGGTGGTGAAG AATCTAAGGGTATGTGGAGATTGTCATGAAGTGATGAAGTTGATATCGAAGATCACAAGA CGAGAGATCGTTGTTAGAGACAACAATAGGTTTCATTGTTTTACAAACGGCTCTTGTTCT TGCAATGACTACTGGTGA

Peptide Sequence

PEP ID	AT3G08820.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2677122-2679179 REVERSE LENGTH=685 \| 201606
Sequence	MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR REIVVRDNNRFHCFTNGSCSCNDYW

Transcript Sequence

Transcript ID	AT3G08820.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2676990-2679265 REVERSE LENGTH=2276 \| 201606
Sequence	AAGACATTAAAATTCGAATTTAAAGCGATGTCCATTTTCAAGAGTGATAAATTGGCGGGA GGTAACCCTAATGTTTTAAAAAAGCGATGAGCATCGTCACCGTTCCATCAGCAACATCAA AAGTCCAGCAGATCAAAACTCTAATCTCCGTCGCATGCACCGTCAATCATCTGAAACAAA TCCACGTCTCTCTCATTAACCACCATCTCCACCACGACACCTTCCTCGTCAACCTCCTCC TCAAGCGAACTCTCTTCTTCCGCCAAACCAAATACTCCTATCTCCTCTTCTCTCATACCC AATTCCCCAACATTTTCCTCTACAATAGTCTCATCAATGGCTTCGTCAATAATCATCTCT TCCATGAAACCCTCGATCTCTTCCTCTCCATCCGCAAACATGGTCTCTACCTCCATGGTT TCACCTTCCCTTTGGTTCTCAAGGCATGCACCAGAGCCTCGAGTCGCAAGCTTGGGATTG ATCTTCATTCCCTTGTGGTCAAATGTGGGTTTAATCACGATGTGGCCGCTATGACGAGCC TGCTCTCTATCTACTCTGGATCCGGGCGTTTGAATGATGCCCACAAACTGTTCGACGAAA TTCCTGACAGAAGCGTTGTTACTTGGACGGCTTTGTTTAGTGGGTATACTACTTCAGGAA GACACAGGGAAGCCATTGATTTGTTTAAGAAGATGGTGGAGATGGGTGTGAAACCCGATA GCTACTTTATTGTTCAGGTTTTATCTGCTTGTGTTCATGTAGGGGATCTCGACAGTGGGG AGTGGATAGTTAAGTACATGGAAGAGATGGAGATGCAGAAGAATTCCTTTGTGCGGACAA CACTTGTCAATCTCTATGCCAAGTGTGGGAAGATGGAGAAAGCACGTTCTGTTTTCGACT CGATGGTGGAGAAAGATATAGTTACTTGGAGCACTATGATACAAGGGTATGCATCGAACA GCTTCCCAAAAGAAGGAATAGAGTTATTTCTCCAGATGTTGCAGGAAAATCTGAAACCGG ACCAGTTTTCTATTGTCGGGTTTCTTTCGTCTTGTGCAAGCTTAGGAGCCCTTGATCTAG GTGAATGGGGAATTAGTTTAATAGATAGGCATGAGTTTTTGACCAATCTGTTTATGGCCA ATGCCCTGATCGACATGTACGCGAAATGTGGGGCTATGGCTCGAGGTTTTGAAGTATTTA AAGAAATGAAGGAGAAAGATATAGTTATCATGAATGCTGCAATTTCTGGTCTGGCCAAGA ATGGCCACGTTAAGCTCTCATTTGCGGTTTTTGGACAAACAGAGAAGTTAGGTATCTCAC CTGATGGGTCCACGTTCCTTGGACTGCTCTGTGGGTGCGTTCACGCAGGCCTAATCCAAG ACGGGCTTCGGTTTTTCAATGCCATAAGCTGTGTTTATGCTTTGAAACGCACGGTTGAGC ACTATGGTTGCATGGTAGATCTTTGGGGCAGAGCAGGAATGTTAGATGACGCATACCGTT TGATCTGCGATATGCCCATGAGGCCAAACGCGATAGTCTGGGGAGCGTTACTGAGCGGAT GCAGACTGGTCAAAGATACGCAGTTAGCTGAAACTGTTCTCAAAGAGCTCATCGCTTTGG AGCCATGGAATGCAGGAAACTATGTTCAATTATCCAACATATACTCTGTTGGTGGCAGAT GGGACGAAGCTGCTGAAGTAAGGGACATGATGAACAAGAAAGGTATGAAGAAGATCCCGG GATATAGTTGGATCGAGTTGGAAGGGAAGGTCCATGAGTTTCTAGCAGATGATAAATCTC ATCCTCTAAGCGACAAGATATATGCAAAGCTAGAAGATTTGGGTAATGAAATGAGGCTTA TGGGTTTTGTTCCAACGACAGAATTTGTTTTCTTCGATGTTGAAGAGGAAGAAAAAGAAA GGGTCTTGGGGTATCACAGCGAGAAGCTTGCGGTTGCGTTAGGGCTGATCAGTACGGATC ATGGCCAAGTGATTCGGGTGGTGAAGAATCTAAGGGTATGTGGAGATTGTCATGAAGTGA TGAAGTTGATATCGAAGATCACAAGACGAGAGATCGTTGTTAGAGACAACAATAGGTTTC ATTGTTTTACAAACGGCTCTTGTTCTTGCAATGACTACTGGTGAGCTCGCTATGGTAAAA CAAACTGATGTGAAAACGTAATTGTTTTGTAGCTTTGACATTTTTGGAAGAAATAAACAT ATTTTTGGTGTTACATGGTTTTTAAGAAAAGTTGGCAGAGACAGAAATATACCTTT