Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G07830.1
CDS Infomation	\| Pectin lyase-like superfamily protein \| Chr3:2499454-2500966 REVERSE LENGTH=1194 \| 201606
Sequence	ATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGCC AATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACGCAGGCGCTT CTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAAAA GGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGATC ACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGGTC GTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAGGT AACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATC AGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCGATGCC AAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCAAGATC ATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCGGGGTC TCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACGGGATG GTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTGGAAGC CTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCACCCTC CAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCACCACT GCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCCTCATC GACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTAAGCTG GCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGAAGCTA TTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTCAGTAC ACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAGTTGGA ACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAA

Peptide Sequence

PEP ID	AT3G07830.1
PEP Infomation	\| Pectin lyase-like superfamily protein \| Chr3:2499454-2500966 REVERSE LENGTH=397 \| 201606
Sequence	MGSYFGISTIFVICLLGFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPK GQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEG NAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKI MAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGS LGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILI DQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQY TGADGPATFMCSNVRPKLVGTQFPKACNTPPVLTQPK

Transcript Sequence

Transcript ID	AT3G07830.1
Transcript Infomation	\| Pectin lyase-like superfamily protein \| Chr3:2499194-2501035 REVERSE LENGTH=1523 \| 201606
Sequence	TTAGAAAACAAACAAAAAAAAAAAAACAAAAAAAAAAACATAAGAAAAAAATTAAAATAA AATAAAATAATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGA TTTTCAGCCAATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACG CAGGCGCTTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTG ATCCCAAAAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCA GTCGAGATCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAA AAATGGGTCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGAC GGTGAAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAA CTTCCCATCAGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCA ATCGATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAAC GTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGT GTCGGGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGG GACGGGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGT GTTGGAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAAT TGCACCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGC TCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCA ATCCTCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCC ATTAAGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCA GTGAAGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAAT ATTCAGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAG CTAGTTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAG TAAAATGTAGAAAGTTCTCATAACATTTAGGAATTTCTCATCCATTTTTTCTTCAATCTT AGTTTTTCCCAATGTCACACAAGGGAGATTTCTTTTATTTAAAAACTGTAAAAGAATTTT GTTTCACTTTTTATTTGTTTGATGCCAACACAAATACATAGATGTGTGTGCGCATATATG AATGCAATAAAACTAAAAAGATGCAGGTTATTTTATTTTATTTGTATTTTAATATCGTTT GTTATCAAAATCCTTTTTTTTTC