Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G07720.1
CDS Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr3:2465439-2467033 FORWARD LENGTH=990 | 201606
Sequence

ATGGCAGCGACTCCAATGGAAGGCAAATGGGTTCAGCTTAAACAGAAAGGAACCGGACCA
GGAGCAAGAAGCTCTCATGCTATAGCTCTTGTGGGAAACAAAATGTATGCCTTTGGTGGC
GAGTTTCAACCACGTGTTCCTGTTGACAACCAGCTCTACGTTTTCGACCTCGAAACTCAG
ACATGGTCTATCCAGGAAGCTTCTGGGGATGCTCCTCCTCCTAGAGTAGGTGTAGCCATG
GCTGCAGTCGGACCCATCATCTATTTCTTTGGTGGCCGGGACTCGACTCACCAGGAGCTC
AACGAGTTATACTGTTTTAACACTTTGACCAACCAGTGGAAACTACTCTCTTCAGGGGAA
ACCGGTCCACAGAACCGAAGCTACCACTCTATTACTGCGGATTCTCAGAACGTGTATGTG
TTTGGTGGATGCGGAGTTGATGGGCGTCTCAACGATCTATGGGCTTACAATGTCGTTGAT
CAGAAATGGATTAAGTTCCCATCTCCGGGAGAAGCTTGTAGAGGAAGAGGCGGTCCAGGA
CTCGAGGTGGTTCAAGGAAAGATCTGGGTGGTATATGGATTCGCAGGAGAAGAAGCAGAC
GATGTCCACTGTTTCGACATAGCTAAAGGGGAATGGAAAGAAGTTGAGACAAAAGGCGAA
AAACCGTCAGCAAGAAGTGTGTTTTCGACTGCGGTTGTTGGGAAACAGATACTGATATCT
GGAGGAGAGATTGACCCGAGCGATCTGGGGCATATGGGAGCAGGATGTTTCACAGGTGAC
GCTTATGGGCTTGATACAGAGACGCTGGAATGGAGGAAATGGGAGGATGGGGTTGGATCG
GTGGAGCATCCCGGTCCTAGAGGATGGTGCGCGTTTGCAGCTGGATCACGAGATGGTAAG
CAAGGTCTGTTGGTTTATGGCGGGAACTCGCCGAGCAATGATAGGCTTGATGATATCTTC
TTCTTCACTCCCAACACTCTACTCAAGTGA

Peptide Sequence

PEP ID

AT3G07720.1
PEP Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr3:2465439-2467033 FORWARD LENGTH=329 | 201606
Sequence

MAATPMEGKWVQLKQKGTGPGARSSHAIALVGNKMYAFGGEFQPRVPVDNQLYVFDLETQ
TWSIQEASGDAPPPRVGVAMAAVGPIIYFFGGRDSTHQELNELYCFNTLTNQWKLLSSGE
TGPQNRSYHSITADSQNVYVFGGCGVDGRLNDLWAYNVVDQKWIKFPSPGEACRGRGGPG
LEVVQGKIWVVYGFAGEEADDVHCFDIAKGEWKEVETKGEKPSARSVFSTAVVGKQILIS
GGEIDPSDLGHMGAGCFTGDAYGLDTETLEWRKWEDGVGSVEHPGPRGWCAFAAGSRDGK
QGLLVYGGNSPSNDRLDDIFFFTPNTLLK

Transcript Sequence

Transcript ID

AT3G07720.1
Transcript Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr3:2465235-2467270 FORWARD LENGTH=1431 | 201606
Sequence

AGTTTACAATGCATTTTGTATAAGACAAATGCTTTTTGATAAAAGAATATTAAGGTACAA
AAAAAGAAAAGGAAGGTAAAAAGATTCCTTTTTCCCTCTCTTTGGGCCTTAAATAGAGAC
AGAGACCGAAAGAAAGAGGAGAAACCTCACACAAAATTGGTCCTAAACGAGTCTCCTTCA
GTCGTAATTTGCAGCAGAGCAACGATGGCAGCGACTCCAATGGAAGGCAAATGGGTTCAG
CTTAAACAGAAAGGAACCGGACCAGGAGCAAGAAGCTCTCATGCTATAGCTCTTGTGGGA
AACAAAATGTATGCCTTTGGTGGCGAGTTTCAACCACGTGTTCCTGTTGACAACCAGCTC
TACGTTTTCGACCTCGAAACTCAGACATGGTCTATCCAGGAAGCTTCTGGGGATGCTCCT
CCTCCTAGAGTAGGTGTAGCCATGGCTGCAGTCGGACCCATCATCTATTTCTTTGGTGGC
CGGGACTCGACTCACCAGGAGCTCAACGAGTTATACTGTTTTAACACTTTGACCAACCAG
TGGAAACTACTCTCTTCAGGGGAAACCGGTCCACAGAACCGAAGCTACCACTCTATTACT
GCGGATTCTCAGAACGTGTATGTGTTTGGTGGATGCGGAGTTGATGGGCGTCTCAACGAT
CTATGGGCTTACAATGTCGTTGATCAGAAATGGATTAAGTTCCCATCTCCGGGAGAAGCT
TGTAGAGGAAGAGGCGGTCCAGGACTCGAGGTGGTTCAAGGAAAGATCTGGGTGGTATAT
GGATTCGCAGGAGAAGAAGCAGACGATGTCCACTGTTTCGACATAGCTAAAGGGGAATGG
AAAGAAGTTGAGACAAAAGGCGAAAAACCGTCAGCAAGAAGTGTGTTTTCGACTGCGGTT
GTTGGGAAACAGATACTGATATCTGGAGGAGAGATTGACCCGAGCGATCTGGGGCATATG
GGAGCAGGATGTTTCACAGGTGACGCTTATGGGCTTGATACAGAGACGCTGGAATGGAGG
AAATGGGAGGATGGGGTTGGATCGGTGGAGCATCCCGGTCCTAGAGGATGGTGCGCGTTT
GCAGCTGGATCACGAGATGGTAAGCAAGGTCTGTTGGTTTATGGCGGGAACTCGCCGAGC
AATGATAGGCTTGATGATATCTTCTTCTTCACTCCCAACACTCTACTCAAGTGATTGGTA
ACTAAGTATGGTTTGGTTTTCTTGCCGGTGAGAGGGGCTGTGTGAATGTTCCTTTTTTTT
TAGTTTCCTTTTGGATTGGATGAACTATGAAGATGTGTGATGTGTTTCATTTTCCTCTGT
TATTTGTAATTAAATAATCGAAATTTTTCATTAAAGAAGATAACGAATAACATCAGCTTA
ATGGTTATTTTAGCAACTAAACCATAATAGAGATACACAACTAAGGATGAG