Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G07290.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2321740-2324382 REVERSE LENGTH=2643 \| 201606
Sequence	ATGCTGCTGATACATATCAGAAGTACTCGAAAGATCTTAGCTTTGGGGCGTCATGTTTTT CCTTCTAATGCCTTCTTCTCCGTCTCTTCTCGACCTTCTCTGTCTTCCTCGGACGAAGTG GCGGCTCATGATGTCGCATCTTTGCTAAAAACCCCCAATTGGGAGAAGAACAGTTCTCTT AAATCTCTAGTCTCTCACATGAATCCAAATGTCGCTTCACAGGTCATTTCGCTTCAACGC AGTGACAACGATATTTGCGTTCGCTTTTTCATGTGGGTCTGCAAGCATTCGTCGTATTGT TTCGACCCAACTCAGAAAAATCAGCTTTTGAAACTGATTGTTTCTTCCGGATTGTATCGA GTTGCGCATGCTGTTATTGTTGCGTTGATCAAGGAATGTAGTAGATGCGAGAAAGAGATG TTGAAACTAATGTATTGTTTTGATGAGCTGAGAGAAGTTTTTGGGTTCCGGTTAAATTAC CCTTGTTACAGCTCTCTTTTGATGTCCTTAGCTAAACTTGATTTAGGATTTTTGGCTTAC GTGACTTATAGAAGAATGGAAGCTGACGGATTTGTTGTTGGTATGATTGATTACAGAACC ATTGTCAATGCTCTGTGTAAGAATGGATACACGGAAGCCGCTGAGATGTTCATGTCTAAG ATTCTTAAAATTGGGTTTGTGTTAGATTCCCATATAGGCACTTCTTTGTTACTGGGTTTT TGCCGTGGATTGAATCTCAGAGATGCACTCAAGGTGTTTGATGTAATGTCTAAGGAGGTA ACTTGTGCACCGAACTCTGTTAGTTACTCCATTTTGATTCACGGGTTGTGTGAAGTAGGG AGACTTGAAGAAGCATTTGGCCTAAAAGATCAAATGGGTGAGAAAGGTTGCCAACCAAGC ACACGTACATATACTGTGCTTATTAAAGCCTTGTGCGATAGAGGTTTGATTGATAAAGCT TTTAACTTGTTTGATGAGATGATTCCTAGAGGGTGTAAACCAAACGTCCACACTTACACT GTTTTGATTGATGGGTTGTGTAGAGACGGAAAGATTGAAGAGGCTAATGGGGTTTGTCGA AAGATGGTTAAAGACAGGATATTTCCTAGTGTAATAACTTACAATGCGTTGATAAATGGC TACTGCAAAGATGGACGGGTTGTTCCCGCTTTTGAGCTTCTTACTGTAATGGAGAAGAGG GCTTGCAAACCAAATGTAAGAACTTTTAACGAGCTTATGGAAGGGTTGTGTAGAGTCGGG AAACCGTACAAGGCTGTGCACCTTTTGAAGAGAATGCTGGACAATGGCCTGTCACCTGAC ATTGTGAGCTATAATGTTTTGATCGATGGGCTTTGTAGAGAAGGCCATATGAATACGGCT TACAAGCTACTTAGCTCGATGAACTGCTTTGACATTGAGCCTGATTGTCTTACATTCACC GCTATAATAAATGCTTTCTGCAAACAAGGGAAGGCTGACGTTGCTAGCGCGTTTTTAGGT TTGATGCTTAGAAAAGGAATAAGCCTAGATGAAGTAACAGGTACAACTCTTATCGATGGT GTCTGTAAAGTCGGTAAAACCCGTGACGCATTGTTTATCCTGGAGACATTGGTTAAAATG AGAATTTTGACAACTCCTCACTCCCTGAATGTGATTCTTGATATGCTCAGTAAAGGTTGT AAAGTGAAGGAGGAATTAGCAATGCTTGGGAAAATCAATAAGCTTGGTTTAGTTCCTTCT GTGGTGACATACACAACATTGGTTGATGGGTTGATTCGATCAGGTGATATTACTGGTTCC TTCAGGATCCTAGAACTGATGAAGTTAAGTGGGTGTTTGCCGAATGTCTATCCATACACA ATCATCATAAATGGTCTTTGTCAATTTGGAAGAGTCGAGGAAGCAGAGAAGCTTCTTTCT GCTATGCAAGATTCAGGAGTTTCACCAAACCATGTCACTTATACCGTTATGGTGAAAGGA TATGTCAACAATGGAAAACTAGACCGTGCTCTTGAAACAGTAAGAGCAATGGTTGAAAGA GGATATGAACTAAATGACCGTATCTATTCTTCATTGTTACAGGGATTTGTCTTATCTCAA AAGGGTATTGATAATTCAGAAGAGAGTACAGTTTCCGATATTGCTCTTAGAGAAACCGAT CCTGAATGTATCAACGAACTCATATCTGTGGTTGAACAACTTGGTGGGTGTATCAGCGGG TTATGTATTTTCTTGGTCACACGGTTATGCAAAGAGGGAAGAACGGATGAGTCCAACGAT CTAGTCCAAAATGTACTCGAGAGAGGTGTTTTTCTTGAGAAGGCCATGGACATCATTATG GAATCTTATTGCAGCAAGAAGAAACACACCAAGTGTATGGAGCTGATAACACTTGTTCTC AAATCCGGATTTGTCCCGAGTTTCAAATCCTTCTGCCTAGTGATTCAAGGTTTGAAGAAG GAAGGAGATGCAGAGCGGGCGCGGGAGCTTGTAATGGAGCTTCTTACCTCAAATGGAGTT GTAGAGAAAAGTGGAGTGTTGACTTATGTTGAGTGTCTCATGGAAGGAGATGAAACTGGT GATTGCAGTGAAGTCATAGATTTGGTTGATCAATTGCACTGCAGAGAAAGACCCACCTTC TAA

Peptide Sequence

PEP ID	AT3G07290.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2321740-2324382 REVERSE LENGTH=880 \| 201606
Sequence	MLLIHIRSTRKILALGRHVFPSNAFFSVSSRPSLSSSDEVAAHDVASLLKTPNWEKNSSL KSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYR VAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAY VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGF CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD PECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIM ESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGV VEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERPTF

Transcript Sequence

Transcript ID	AT3G07290.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:2321546-2324568 REVERSE LENGTH=3023 \| 201606
Sequence	ATTTCAATTACCTCATAACCGGATCACTATATCTTCGCCGTGAAAATATTCAGACAGACG ACAACACCTGCATAAACACCATTGTTCAAAATAGCCAGAGAGATAAAAGTAAAACCCTAA ACCCCACTAGTTAAAGTTAACATTTTTATTGTTTCTCTCCGGCTCCTTTCAATCTGTGTA CTGTGTATGCTGCTGATACATATCAGAAGTACTCGAAAGATCTTAGCTTTGGGGCGTCAT GTTTTTCCTTCTAATGCCTTCTTCTCCGTCTCTTCTCGACCTTCTCTGTCTTCCTCGGAC GAAGTGGCGGCTCATGATGTCGCATCTTTGCTAAAAACCCCCAATTGGGAGAAGAACAGT TCTCTTAAATCTCTAGTCTCTCACATGAATCCAAATGTCGCTTCACAGGTCATTTCGCTT CAACGCAGTGACAACGATATTTGCGTTCGCTTTTTCATGTGGGTCTGCAAGCATTCGTCG TATTGTTTCGACCCAACTCAGAAAAATCAGCTTTTGAAACTGATTGTTTCTTCCGGATTG TATCGAGTTGCGCATGCTGTTATTGTTGCGTTGATCAAGGAATGTAGTAGATGCGAGAAA GAGATGTTGAAACTAATGTATTGTTTTGATGAGCTGAGAGAAGTTTTTGGGTTCCGGTTA AATTACCCTTGTTACAGCTCTCTTTTGATGTCCTTAGCTAAACTTGATTTAGGATTTTTG GCTTACGTGACTTATAGAAGAATGGAAGCTGACGGATTTGTTGTTGGTATGATTGATTAC AGAACCATTGTCAATGCTCTGTGTAAGAATGGATACACGGAAGCCGCTGAGATGTTCATG TCTAAGATTCTTAAAATTGGGTTTGTGTTAGATTCCCATATAGGCACTTCTTTGTTACTG GGTTTTTGCCGTGGATTGAATCTCAGAGATGCACTCAAGGTGTTTGATGTAATGTCTAAG GAGGTAACTTGTGCACCGAACTCTGTTAGTTACTCCATTTTGATTCACGGGTTGTGTGAA GTAGGGAGACTTGAAGAAGCATTTGGCCTAAAAGATCAAATGGGTGAGAAAGGTTGCCAA CCAAGCACACGTACATATACTGTGCTTATTAAAGCCTTGTGCGATAGAGGTTTGATTGAT AAAGCTTTTAACTTGTTTGATGAGATGATTCCTAGAGGGTGTAAACCAAACGTCCACACT TACACTGTTTTGATTGATGGGTTGTGTAGAGACGGAAAGATTGAAGAGGCTAATGGGGTT TGTCGAAAGATGGTTAAAGACAGGATATTTCCTAGTGTAATAACTTACAATGCGTTGATA AATGGCTACTGCAAAGATGGACGGGTTGTTCCCGCTTTTGAGCTTCTTACTGTAATGGAG AAGAGGGCTTGCAAACCAAATGTAAGAACTTTTAACGAGCTTATGGAAGGGTTGTGTAGA GTCGGGAAACCGTACAAGGCTGTGCACCTTTTGAAGAGAATGCTGGACAATGGCCTGTCA CCTGACATTGTGAGCTATAATGTTTTGATCGATGGGCTTTGTAGAGAAGGCCATATGAAT ACGGCTTACAAGCTACTTAGCTCGATGAACTGCTTTGACATTGAGCCTGATTGTCTTACA TTCACCGCTATAATAAATGCTTTCTGCAAACAAGGGAAGGCTGACGTTGCTAGCGCGTTT TTAGGTTTGATGCTTAGAAAAGGAATAAGCCTAGATGAAGTAACAGGTACAACTCTTATC GATGGTGTCTGTAAAGTCGGTAAAACCCGTGACGCATTGTTTATCCTGGAGACATTGGTT AAAATGAGAATTTTGACAACTCCTCACTCCCTGAATGTGATTCTTGATATGCTCAGTAAA GGTTGTAAAGTGAAGGAGGAATTAGCAATGCTTGGGAAAATCAATAAGCTTGGTTTAGTT CCTTCTGTGGTGACATACACAACATTGGTTGATGGGTTGATTCGATCAGGTGATATTACT GGTTCCTTCAGGATCCTAGAACTGATGAAGTTAAGTGGGTGTTTGCCGAATGTCTATCCA TACACAATCATCATAAATGGTCTTTGTCAATTTGGAAGAGTCGAGGAAGCAGAGAAGCTT CTTTCTGCTATGCAAGATTCAGGAGTTTCACCAAACCATGTCACTTATACCGTTATGGTG AAAGGATATGTCAACAATGGAAAACTAGACCGTGCTCTTGAAACAGTAAGAGCAATGGTT GAAAGAGGATATGAACTAAATGACCGTATCTATTCTTCATTGTTACAGGGATTTGTCTTA TCTCAAAAGGGTATTGATAATTCAGAAGAGAGTACAGTTTCCGATATTGCTCTTAGAGAA ACCGATCCTGAATGTATCAACGAACTCATATCTGTGGTTGAACAACTTGGTGGGTGTATC AGCGGGTTATGTATTTTCTTGGTCACACGGTTATGCAAAGAGGGAAGAACGGATGAGTCC AACGATCTAGTCCAAAATGTACTCGAGAGAGGTGTTTTTCTTGAGAAGGCCATGGACATC ATTATGGAATCTTATTGCAGCAAGAAGAAACACACCAAGTGTATGGAGCTGATAACACTT GTTCTCAAATCCGGATTTGTCCCGAGTTTCAAATCCTTCTGCCTAGTGATTCAAGGTTTG AAGAAGGAAGGAGATGCAGAGCGGGCGCGGGAGCTTGTAATGGAGCTTCTTACCTCAAAT GGAGTTGTAGAGAAAAGTGGAGTGTTGACTTATGTTGAGTGTCTCATGGAAGGAGATGAA ACTGGTGATTGCAGTGAAGTCATAGATTTGGTTGATCAATTGCACTGCAGAGAAAGACCC ACCTTCTAAAATTATTATTACACATGATTTTGTGTAGCTTTTTTGTTTGTTTGTAGTAGC AAGAAGAGAATCCTTTTGAAGTACAGCGTGTGGAGATCATACCTTGAGTAATACCAAGGA TCCTAGTTGGGCTGGGCCTGGAAGATATTAAAATAAATCTACGAATGGGCTTTTAGCCCA AATGTTAAATTGTGGCATTAAAA