Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT3G05350.1
CDS Infomation

| Metallopeptidase M24 family protein | Chr3:1527103-1533843 REVERSE LENGTH=2133 | 201606
Sequence

ATGATTCCTCTAACTCTTTCGTCGCCGTCTCTGAATCGGCTCGTTTTATCCACATCACGT
TACTCACACTCTCTATTTCTCAGCAATTTCAATTCGCTCTCTCTGATCCACCGGAAATTA
CCGTATAAACCTCTTTTTGGCGCAAGGTGTCATGCTAGTAGCAGCAGCAGCAGCTCTTCC
TCCTTCACGGCAAAGTCTTCCAAAGAGATTCGTAAAGCTCAAACCAAAGTAGTTGTCGAC
GAGAAGCTTAGCTCGATCCGGCGACTGTTTTCGGAGCCGGGTGTTGGAATCGACGCTTAT
ATCATACCTTCACAAGATGCACATCAGAGCGAGTTCATCGCAGAGTGCTATGCCAGGAGG
GCTTATATATCAGGATTTACTGGAAGTGCTGGTACCGCTGTTGTCACCAAGGATAAGGCA
GCTCTATGGACAGATGGCCGCTATTTTCTTCAGGCGGAGAAGCAATTAAACTCTAGTTGG
ATTCTCATGCGGGCTGGTAATCCGGGAGTCCCCACGGCGAGTGAATGGATAGCTGATGTT
TTGGCGCCTGGTGGAAGAGTTGGTATTGACCCTTTCCTTTTTTCCGCCGATGCTGCTGAG
GAATTGAAGGAGGTTATAGCAAAGAAGAATCATGAGTTGGTTTACTTGTACAATGTAAAT
CTTGTGGATGAGATATGGAAGGACTCAAGGCCAAAGCCTCCAAGCAGACAAATAAGGATA
CATGACTTGAAGTATGCTGGTTTAGATGTGGCCTCGAAATTGTTGTCTTTGAGGAACCAA
ATTATGGATGCTGGCACATCTGCCATTGTAATATCCATGCTTGATGAGATTGCATGGGTG
CTTAATCTGAGAGGGAGCGATGTTCCACATTCACCTGTAATGTACGCATATCTGATTGTA
GAGGTTGACCAAGCCCAACTTTTTGTAGATAATTCTAAAGTAACGGTGGAGGTGAAAGAT
CATTTGAAAAACGCAGGGATCGAACTTAGACCTTACGATTCCATTCTTCAAGGAATAGAT
AGTTTGGCAGCACGAGGAGCTCAGCTCTTGATGGATCCATCAACCCTCAACGTAGCTATC
ATTAGTACCTACAAATCTGCCTGTGAAAGATATTCGAGGAATTTTGAAAGCGAAGCCAAA
GTTAAGACAAAGTTTACTGATAGCTCCAGCGGATATACTGCCAATCCTTCTGGTATTTAC
ATGCAATCTCCTATTTCGTGGGCAAAGGCCATTAAAAATGATGCTGAGCTAAAGGGAATG
AAGAATTCTCACTTGAGAGATGCTGCTGCCCTAGCTCATTTCTGGGCTTGGCTGGAAGAA
GAAGTGCATAAGAATGCGAATCTAACAGAGGTCGATGTGGCTGACAGGCTTCTTGAATTC
CGTTCAATGCAAGATGGTTTTATGGATACAAGCTTTGATACAATAAGTGGTTCCGGTGCA
AATGGTGCTATTATACATTATAAGCCCGAGCCTGAGAGCTGCAGTCGTGTAGACCCTCAA
AAACTTTTTTTGCTGGATAGTGGCGCTCAATATGTTGATGGAACAACAGACATCACCAGA
ACAGTACATTTTAGTGAACCTTCTGCCCGTGAAAAGGAATGTTTCACTCGAGTCTTGCAG
GGTCATATAGCTCTTGATCAAGCCGTGTTCCCAGAAGGTACTCCTGGTTTTGTATTGGAT
GGGTTTGCACGCTCTTCTCTATGGAAAATTGGACTTGATTACCGCCATGGGACAGGACAC
GGCGTAGGTGCTGCACTCAATGTGCATGAAGGTCCTCAAAGTATTAGCTTTCGGTATGGA
AACATGACCCCTCTTCAAAATGGCATGATAGTAAGCAATGAACCTGGATATTATGAAGAC
CATGCATTTGGGATCCGAATTGAGAATCTCCTTCATGTGAGAGATGCTGAAACACCAAAC
CGCTTTGGTGGTGCTACATACCTTGGATTTGAGAAGCTTACATTCTTCCCCATTCAGACA
AAAATGGTTGATGTTTCTTTGCTGTCTGATACTGAGGTTGACTGGCTTAATAGTTACCAC
GCGGAAGTCTGGGAAAAGGTTTCACCATTATTGGAAGGTTCTACTACTCAGCAGTGGCTC
TGGAACAACACAAGACCCTTAGCCAAACCATGA

Peptide Sequence

PEP ID

AT3G05350.1
PEP Infomation

| Metallopeptidase M24 family protein | Chr3:1527103-1533843 REVERSE LENGTH=710 | 201606
Sequence

MIPLTLSSPSLNRLVLSTSRYSHSLFLSNFNSLSLIHRKLPYKPLFGARCHASSSSSSSS
SFTAKSSKEIRKAQTKVVVDEKLSSIRRLFSEPGVGIDAYIIPSQDAHQSEFIAECYARR
AYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLNSSWILMRAGNPGVPTASEWIADV
LAPGGRVGIDPFLFSADAAEELKEVIAKKNHELVYLYNVNLVDEIWKDSRPKPPSRQIRI
HDLKYAGLDVASKLLSLRNQIMDAGTSAIVISMLDEIAWVLNLRGSDVPHSPVMYAYLIV
EVDQAQLFVDNSKVTVEVKDHLKNAGIELRPYDSILQGIDSLAARGAQLLMDPSTLNVAI
ISTYKSACERYSRNFESEAKVKTKFTDSSSGYTANPSGIYMQSPISWAKAIKNDAELKGM
KNSHLRDAAALAHFWAWLEEEVHKNANLTEVDVADRLLEFRSMQDGFMDTSFDTISGSGA
NGAIIHYKPEPESCSRVDPQKLFLLDSGAQYVDGTTDITRTVHFSEPSAREKECFTRVLQ
GHIALDQAVFPEGTPGFVLDGFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYG
NMTPLQNGMIVSNEPGYYEDHAFGIRIENLLHVRDAETPNRFGGATYLGFEKLTFFPIQT
KMVDVSLLSDTEVDWLNSYHAEVWEKVSPLLEGSTTQQWLWNNTRPLAKP

Transcript Sequence

Transcript ID

AT3G05350.1
Transcript Infomation

| Metallopeptidase M24 family protein | Chr3:1526963-1533909 REVERSE LENGTH=2339 | 201606
Sequence

ATTTATCCGTAATCACTCTGCTCAAGAAGCTTCTCCTCTTGTGTGATTCTCCTGCAATCG
CTGGTGATGATTCCTCTAACTCTTTCGTCGCCGTCTCTGAATCGGCTCGTTTTATCCACA
TCACGTTACTCACACTCTCTATTTCTCAGCAATTTCAATTCGCTCTCTCTGATCCACCGG
AAATTACCGTATAAACCTCTTTTTGGCGCAAGGTGTCATGCTAGTAGCAGCAGCAGCAGC
TCTTCCTCCTTCACGGCAAAGTCTTCCAAAGAGATTCGTAAAGCTCAAACCAAAGTAGTT
GTCGACGAGAAGCTTAGCTCGATCCGGCGACTGTTTTCGGAGCCGGGTGTTGGAATCGAC
GCTTATATCATACCTTCACAAGATGCACATCAGAGCGAGTTCATCGCAGAGTGCTATGCC
AGGAGGGCTTATATATCAGGATTTACTGGAAGTGCTGGTACCGCTGTTGTCACCAAGGAT
AAGGCAGCTCTATGGACAGATGGCCGCTATTTTCTTCAGGCGGAGAAGCAATTAAACTCT
AGTTGGATTCTCATGCGGGCTGGTAATCCGGGAGTCCCCACGGCGAGTGAATGGATAGCT
GATGTTTTGGCGCCTGGTGGAAGAGTTGGTATTGACCCTTTCCTTTTTTCCGCCGATGCT
GCTGAGGAATTGAAGGAGGTTATAGCAAAGAAGAATCATGAGTTGGTTTACTTGTACAAT
GTAAATCTTGTGGATGAGATATGGAAGGACTCAAGGCCAAAGCCTCCAAGCAGACAAATA
AGGATACATGACTTGAAGTATGCTGGTTTAGATGTGGCCTCGAAATTGTTGTCTTTGAGG
AACCAAATTATGGATGCTGGCACATCTGCCATTGTAATATCCATGCTTGATGAGATTGCA
TGGGTGCTTAATCTGAGAGGGAGCGATGTTCCACATTCACCTGTAATGTACGCATATCTG
ATTGTAGAGGTTGACCAAGCCCAACTTTTTGTAGATAATTCTAAAGTAACGGTGGAGGTG
AAAGATCATTTGAAAAACGCAGGGATCGAACTTAGACCTTACGATTCCATTCTTCAAGGA
ATAGATAGTTTGGCAGCACGAGGAGCTCAGCTCTTGATGGATCCATCAACCCTCAACGTA
GCTATCATTAGTACCTACAAATCTGCCTGTGAAAGATATTCGAGGAATTTTGAAAGCGAA
GCCAAAGTTAAGACAAAGTTTACTGATAGCTCCAGCGGATATACTGCCAATCCTTCTGGT
ATTTACATGCAATCTCCTATTTCGTGGGCAAAGGCCATTAAAAATGATGCTGAGCTAAAG
GGAATGAAGAATTCTCACTTGAGAGATGCTGCTGCCCTAGCTCATTTCTGGGCTTGGCTG
GAAGAAGAAGTGCATAAGAATGCGAATCTAACAGAGGTCGATGTGGCTGACAGGCTTCTT
GAATTCCGTTCAATGCAAGATGGTTTTATGGATACAAGCTTTGATACAATAAGTGGTTCC
GGTGCAAATGGTGCTATTATACATTATAAGCCCGAGCCTGAGAGCTGCAGTCGTGTAGAC
CCTCAAAAACTTTTTTTGCTGGATAGTGGCGCTCAATATGTTGATGGAACAACAGACATC
ACCAGAACAGTACATTTTAGTGAACCTTCTGCCCGTGAAAAGGAATGTTTCACTCGAGTC
TTGCAGGGTCATATAGCTCTTGATCAAGCCGTGTTCCCAGAAGGTACTCCTGGTTTTGTA
TTGGATGGGTTTGCACGCTCTTCTCTATGGAAAATTGGACTTGATTACCGCCATGGGACA
GGACACGGCGTAGGTGCTGCACTCAATGTGCATGAAGGTCCTCAAAGTATTAGCTTTCGG
TATGGAAACATGACCCCTCTTCAAAATGGCATGATAGTAAGCAATGAACCTGGATATTAT
GAAGACCATGCATTTGGGATCCGAATTGAGAATCTCCTTCATGTGAGAGATGCTGAAACA
CCAAACCGCTTTGGTGGTGCTACATACCTTGGATTTGAGAAGCTTACATTCTTCCCCATT
CAGACAAAAATGGTTGATGTTTCTTTGCTGTCTGATACTGAGGTTGACTGGCTTAATAGT
TACCACGCGGAAGTCTGGGAAAAGGTTTCACCATTATTGGAAGGTTCTACTACTCAGCAG
TGGCTCTGGAACAACACAAGACCCTTAGCCAAACCATGATCAAACCCACCAAGTTTTATT
TCCAATAAAAGCTTAGACTTGATCCTTCATGATTAGTACCAAAATGTTCGCGTGTGTAAA
TTACAAACAGAAATGTGATATTTTTCGTTTATTTTAAAAAAAGATCCTCAACTTTTACT