Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G04820.1
CDS Infomation	\| Pseudouridine synthase family protein \| Chr3:1321453-1325949 REVERSE LENGTH=2148 \| 201606
Sequence	ATGAAATTAAGTAGAACTGTCTTGTCTTGTTTGCCGTCTCTGCTAAAACCCTACTCGAGC TTGAGCTGGACAACGAAAATAGCGACGATAGCTACAAACTTTGAAGGTATGAAAACAGTA GATGAAGCTGACGTGGGCATCTCCTGTTTTATCTCCCAGCTCCCTGGCTTCCGTGGAATC CTCAAACAAAGATACGCAGACTTTATTGTTAATGAAGTAGATATGGATGGTAATGTGGTT CATTTGACATCCTTGGACTTGCCTCCTGAGATGGCTGTGAAGGAGGAGGATAAAGCGAAA AGTTGTGATAATGTACCCCAAAATTATACTTCTGCAGTTGAGTCTTTCAAATCTATTTCC AGTGTTACTGATGCAGAGCGTTTGGAAATATTGATCAATCAAGTCACCTCAGGAACTGAT GGTGAAGTCTTACCAGTTGTTCTTGATCCAAGTTCTGACAAATCCAAGAGAACGGCTATC CACAACTTTGTTAAAGAGAATTTCAAGTTCCTAGTGACTGACACTGTCGACGGTCCTGAT TCTACTTCAAAATGCATCCGTGTGCGAGTGAATTCAGGAGCCAATAACAACAGAGGTAAT AGATCAAAAAAACGAAAGGAAAGAGGCGATAAGCCTTTTGATAGCAGAGGTTCAGAGCAT TGGCCAGAGCATGTTGGCAAGTTTCTCAGGTTCCATCTTTACAAGGAGAACAAAGATACA CAAGAGGCCTTGGGATTGATTGGAAAGATGCTAGGCGTTCAGCCAAAGTCATTCGGATTC TCTGGAACAAAAGATAAGCGGTCTGTTTCTACTCAGCGTGTAACTGTGTTCAAACAGCAA GCTAGCAAATTGGCTGCGCTTAACAAGAGATTGTTTGGGATCAAAGTTGGTGACTTCTGC AATGTCAAAGAGGGCCTTCTCCTTGGGCAGCTCATGGGAAACAGATTTACTATCACATTA AGAGGAGTGGTTGCGGATTCTGAAGAAACTATAAAACAATCTGCAGAATCCTTGGGGAAA GATGGCTTCATCAACTACTTTGGCTTGCAGCGTTTTGGAAGTGGTTCAGTACCAACCCAC CATGTAGGAGCTGCACTATTGAAAGGAGAGTGGAAAGATGCTGTAGACATGATTCTTGAT CCAAGAGAAACTGAAAGGCATGTAGTAAATGATGCCCGGGAATATTACAAAGAAACTGGT GACATTGACGGGACTCTAAGGCAACTACCGCGATACCTCGTTGCTGAAAGAGCCATACTG CAGTGTCTGAAGAAATGCCCTGGTAACTACCTGCAGGCTCTTAAAGGCATTCCCAGAACT TTGAGAATGATGTATGTACATAGTTATCAAAGCTACTTATGGAACAATGCAGCAAGTCTG CGCGTCAAAAATTATGGAACCAGCCAAGTTGTGTTGGGGGACTTGGTAAGTACAAAGGTA GATGCTGCAAAAAGAATGGTCGACAGTCTTACCTCTGAGCACAACGAAAGCAGCGAAGAG GCATTGGATTGTGACCAGGTAGATGATACTGCTGTTGTAGATCTTCCAGCTGAAAGGAGT GACCTTGTTAAGGTTGTAAGTATAGAGGATTTGGAAGCTGGAACTTACTCGACCAGTGAC ATCGTCCTCCCTCTACCTGGTTCAAGAGTCATCTACCCGTCTAATGACATTGCAGAAATT TATCATGATTTGGCAAAGAAGGACGGTATCAGCCTAACTGAGAGCATTCACGGTGTAAAG GAATTCTCAATAACTAGCATGACTGGTGGTTATAGACGTGTTTTCCAGAAACCAATAGAC TTTGAATGGGAATTACTGACTTACACTGACAGCAATAAACCATTGGCAGAGACGGATCTG GACAGGATACCCATGAACAAGCCGGTGGAGAAAGTTGGATCTACTGAGGAAATTGAAGAT GAATCAATGAAATCTGATACTAACCCACATGATTCTGGTGAAACCAATTTGAAAGACCAG ACAGATAGCAATGAGGCTGAAAAAGACACTGGAAATCCAGATTCTGAGCAGACACAGATG GCGCTTAAAATGGCACTCACTCTTCCATCTTCTTGTTATGCCACAATGGCAATCAGAGAA CTATTAAAGACGTCAACTTCTGTTGCATATCACAAGACACTTAACTAG

Peptide Sequence

PEP ID	AT3G04820.1
PEP Infomation	\| Pseudouridine synthase family protein \| Chr3:1321453-1325949 REVERSE LENGTH=715 \| 201606
Sequence	MKLSRTVLSCLPSLLKPYSSLSWTTKIATIATNFEGMKTVDEADVGISCFISQLPGFRGI LKQRYADFIVNEVDMDGNVVHLTSLDLPPEMAVKEEDKAKSCDNVPQNYTSAVESFKSIS SVTDAERLEILINQVTSGTDGEVLPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPD STSKCIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDT QEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFC NVKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTH HVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAIL QCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKV DAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSD IVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPID FEWELLTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHDSGETNLKDQ TDSNEAEKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN

Transcript Sequence

Transcript ID	AT3G04820.1
Transcript Infomation	\| Pseudouridine synthase family protein \| Chr3:1321228-1326005 REVERSE LENGTH=2429 \| 201606
Sequence	GTGCGTTTTACTGAGTATTCGATTTCAATGTCGTCGCCGTTCCGGTGAAGAAGGCAATGA AATTAAGTAGAACTGTCTTGTCTTGTTTGCCGTCTCTGCTAAAACCCTACTCGAGCTTGA GCTGGACAACGAAAATAGCGACGATAGCTACAAACTTTGAAGGTATGAAAACAGTAGATG AAGCTGACGTGGGCATCTCCTGTTTTATCTCCCAGCTCCCTGGCTTCCGTGGAATCCTCA AACAAAGATACGCAGACTTTATTGTTAATGAAGTAGATATGGATGGTAATGTGGTTCATT TGACATCCTTGGACTTGCCTCCTGAGATGGCTGTGAAGGAGGAGGATAAAGCGAAAAGTT GTGATAATGTACCCCAAAATTATACTTCTGCAGTTGAGTCTTTCAAATCTATTTCCAGTG TTACTGATGCAGAGCGTTTGGAAATATTGATCAATCAAGTCACCTCAGGAACTGATGGTG AAGTCTTACCAGTTGTTCTTGATCCAAGTTCTGACAAATCCAAGAGAACGGCTATCCACA ACTTTGTTAAAGAGAATTTCAAGTTCCTAGTGACTGACACTGTCGACGGTCCTGATTCTA CTTCAAAATGCATCCGTGTGCGAGTGAATTCAGGAGCCAATAACAACAGAGGTAATAGAT CAAAAAAACGAAAGGAAAGAGGCGATAAGCCTTTTGATAGCAGAGGTTCAGAGCATTGGC CAGAGCATGTTGGCAAGTTTCTCAGGTTCCATCTTTACAAGGAGAACAAAGATACACAAG AGGCCTTGGGATTGATTGGAAAGATGCTAGGCGTTCAGCCAAAGTCATTCGGATTCTCTG GAACAAAAGATAAGCGGTCTGTTTCTACTCAGCGTGTAACTGTGTTCAAACAGCAAGCTA GCAAATTGGCTGCGCTTAACAAGAGATTGTTTGGGATCAAAGTTGGTGACTTCTGCAATG TCAAAGAGGGCCTTCTCCTTGGGCAGCTCATGGGAAACAGATTTACTATCACATTAAGAG GAGTGGTTGCGGATTCTGAAGAAACTATAAAACAATCTGCAGAATCCTTGGGGAAAGATG GCTTCATCAACTACTTTGGCTTGCAGCGTTTTGGAAGTGGTTCAGTACCAACCCACCATG TAGGAGCTGCACTATTGAAAGGAGAGTGGAAAGATGCTGTAGACATGATTCTTGATCCAA GAGAAACTGAAAGGCATGTAGTAAATGATGCCCGGGAATATTACAAAGAAACTGGTGACA TTGACGGGACTCTAAGGCAACTACCGCGATACCTCGTTGCTGAAAGAGCCATACTGCAGT GTCTGAAGAAATGCCCTGGTAACTACCTGCAGGCTCTTAAAGGCATTCCCAGAACTTTGA GAATGATGTATGTACATAGTTATCAAAGCTACTTATGGAACAATGCAGCAAGTCTGCGCG TCAAAAATTATGGAACCAGCCAAGTTGTGTTGGGGGACTTGGTAAGTACAAAGGTAGATG CTGCAAAAAGAATGGTCGACAGTCTTACCTCTGAGCACAACGAAAGCAGCGAAGAGGCAT TGGATTGTGACCAGGTAGATGATACTGCTGTTGTAGATCTTCCAGCTGAAAGGAGTGACC TTGTTAAGGTTGTAAGTATAGAGGATTTGGAAGCTGGAACTTACTCGACCAGTGACATCG TCCTCCCTCTACCTGGTTCAAGAGTCATCTACCCGTCTAATGACATTGCAGAAATTTATC ATGATTTGGCAAAGAAGGACGGTATCAGCCTAACTGAGAGCATTCACGGTGTAAAGGAAT TCTCAATAACTAGCATGACTGGTGGTTATAGACGTGTTTTCCAGAAACCAATAGACTTTG AATGGGAATTACTGACTTACACTGACAGCAATAAACCATTGGCAGAGACGGATCTGGACA GGATACCCATGAACAAGCCGGTGGAGAAAGTTGGATCTACTGAGGAAATTGAAGATGAAT CAATGAAATCTGATACTAACCCACATGATTCTGGTGAAACCAATTTGAAAGACCAGACAG ATAGCAATGAGGCTGAAAAAGACACTGGAAATCCAGATTCTGAGCAGACACAGATGGCGC TTAAAATGGCACTCACTCTTCCATCTTCTTGTTATGCCACAATGGCAATCAGAGAACTAT TAAAGACGTCAACTTCTGTTGCATATCACAAGACACTTAACTAGTGATTAACATCCGCTC CTCCTGGCTAGCACACACTGCGTATAAAGCCATTTGCTGGTTATATTACTCTGTTTCAGA CACTTAACTAGTGATTCTATCTTGTCTATTTTAAACATGTGTACATTCATGTATTTGTGC GGAAGTTCAGGAAATTTTGTCTGAAATAAGCACCAAAATAGAATTTTGGTAACCGGCCAA GTTTTTTCTAGAATTTCAATGTATCAGAC